0s autopkgtest [18:29:46]: starting date: 2023-11-18 0s autopkgtest [18:29:46]: git checkout: f7cd36b ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [18:29:46]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.io6mz4lt/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed --apt-upgrade python-fabio --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3-defaults/3.11.4-5ubuntu1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos01-arm64-11.secgroup --name adt-noble-arm64-python-fabio-20231118-182946-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpad.net,10.24.0.0/24'"'"'' --mirror=http://us.ports.ubuntu.com/ubuntu-ports/ 343s autopkgtest [18:35:29]: @@@@@@@@@@@@@@@@@@@@ test bed setup 343s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [102 kB] 344s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [52.1 kB] 344s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [8052 B] 344s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [1266 kB] 344s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [4624 B] 344s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 Packages [46.9 kB] 344s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/restricted arm64 Packages [30.1 kB] 344s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 Packages [1328 kB] 345s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/multiverse arm64 Packages [2644 B] 345s Fetched 2840 kB in 2s (1603 kB/s) 345s Reading package lists... 347s Reading package lists... 347s Building dependency tree... 347s Reading state information... 347s Calculating upgrade... 348s The following packages will be upgraded: 348s libelf1 python-apt-common python3-apt 348s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 348s Need to get 278 kB of archives. 348s After this operation, 436 kB of additional disk space will be used. 348s Get:1 http://ftpmaster.internal/ubuntu noble/main arm64 libelf1 arm64 0.190-1 [57.1 kB] 348s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 python-apt-common all 2.6.0ubuntu2 [18.2 kB] 348s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 python3-apt arm64 2.6.0ubuntu2 [202 kB] 349s Fetched 278 kB in 0s (584 kB/s) 349s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72700 files and directories currently installed.) 349s Preparing to unpack .../libelf1_0.190-1_arm64.deb ... 349s Unpacking libelf1:arm64 (0.190-1) over (0.189-4) ... 349s Preparing to unpack .../python-apt-common_2.6.0ubuntu2_all.deb ... 349s Unpacking python-apt-common (2.6.0ubuntu2) over (2.6.0ubuntu1) ... 349s Preparing to unpack .../python3-apt_2.6.0ubuntu2_arm64.deb ... 349s Unpacking python3-apt (2.6.0ubuntu2) over (2.6.0ubuntu1) ... 349s Setting up python-apt-common (2.6.0ubuntu2) ... 349s Setting up libelf1:arm64 (0.190-1) ... 349s Setting up python3-apt (2.6.0ubuntu2) ... 349s Processing triggers for libc-bin (2.38-3ubuntu1) ... 349s Reading package lists... 350s Building dependency tree... 350s Reading state information... 350s 0 upgraded, 0 newly installed, 0 to remove and 26 not upgraded. 351s sh: Attempting to set up Debian/Ubuntu apt sources automatically 351s sh: Distribution appears to be Ubuntu 352s Reading package lists... 352s Building dependency tree... 352s Reading state information... 353s eatmydata is already the newest version (131-1). 353s dbus is already the newest version (1.14.10-1ubuntu1). 353s 0 upgraded, 0 newly installed, 0 to remove and 26 not upgraded. 353s Reading package lists... 353s Building dependency tree... 353s Reading state information... 354s rng-tools-debian is already the newest version (2.4). 354s 0 upgraded, 0 newly installed, 0 to remove and 26 not upgraded. 354s Reading package lists... 354s Building dependency tree... 354s Reading state information... 355s haveged is already the newest version (1.9.14-1ubuntu1). 355s 0 upgraded, 0 newly installed, 0 to remove and 26 not upgraded. 355s Reading package lists... 355s Building dependency tree... 355s Reading state information... 355s The following packages will be REMOVED: 355s cloud-init* python3-configobj* python3-debconf* 356s 0 upgraded, 0 newly installed, 3 to remove and 26 not upgraded. 356s After this operation, 3190 kB disk space will be freed. 356s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72702 files and directories currently installed.) 356s Removing cloud-init (23.4~3g0cb0b80f-0ubuntu1) ... 356s Removing python3-configobj (5.0.8-2) ... 356s Removing python3-debconf (1.5.82) ... 357s Processing triggers for man-db (2.11.2-3) ... 357s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72313 files and directories currently installed.) 357s Purging configuration files for cloud-init (23.4~3g0cb0b80f-0ubuntu1) ... 358s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 358s Processing triggers for rsyslog (8.2306.0-2ubuntu2) ... 358s Reading package lists... 358s Building dependency tree... 358s Reading state information... 359s linux-generic is already the newest version (6.5.0.9.11). 359s 0 upgraded, 0 newly installed, 0 to remove and 26 not upgraded. 359s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 359s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 359s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 359s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 360s Reading package lists... 361s Reading package lists... 361s Building dependency tree... 361s Reading state information... 361s Calculating upgrade... 362s The following package was automatically installed and is no longer required: 362s libunistring2 362s Use 'sudo apt autoremove' to remove it. 362s The following packages will be upgraded: 362s bash jq libarchive13 libgnutls30 libgpg-error-l10n libgpg-error0 libgpgme11 362s libjq1 libpython3-stdlib libsasl2-2 libsasl2-modules libsasl2-modules-db 362s libseccomp2 libsqlite3-0 libssl3 libuv1 man-db openssl 362s python-babel-localedata python3 python3-babel python3-certifi 362s python3-minimal python3-pyparsing python3-tz secureboot-db 362s 26 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 362s Need to get 14.4 MB of archives. 362s After this operation, 223 kB of additional disk space will be used. 362s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 bash arm64 5.2.15-2ubuntu2 [786 kB] 362s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 python3-minimal arm64 3.11.4-5ubuntu1 [26.9 kB] 362s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 python3 arm64 3.11.4-5ubuntu1 [22.9 kB] 362s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpython3-stdlib arm64 3.11.4-5ubuntu1 [9568 B] 362s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libgpg-error-l10n all 1.47-3 [7936 B] 362s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libgpg-error0 arm64 1.47-3 [69.5 kB] 362s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libgnutls30 arm64 3.8.1-4ubuntu4 [938 kB] 363s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libseccomp2 arm64 2.5.4-2ubuntu1 [50.1 kB] 363s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libsqlite3-0 arm64 3.44.0-1 [692 kB] 363s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libssl3 arm64 3.0.10-1ubuntu3 [1752 kB] 363s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 openssl arm64 3.0.10-1ubuntu3 [1168 kB] 364s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libuv1 arm64 1.46.0-2 [93.3 kB] 364s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 man-db arm64 2.12.0-1 [1224 kB] 364s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 jq arm64 1.7-1 [63.6 kB] 364s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libjq1 arm64 1.7-1 [132 kB] 364s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libarchive13 arm64 3.7.2-1ubuntu1 [374 kB] 364s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libgpgme11 arm64 1.18.0-4ubuntu1 [134 kB] 364s Get:18 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-4 [21.1 kB] 364s Get:19 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-4 [54.5 kB] 364s Get:20 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libsasl2-modules arm64 2.1.28+dfsg1-4 [69.0 kB] 364s Get:21 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 python3-tz all 2023.3.post1-1 [31.3 kB] 364s Get:22 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 python3-babel all 2.10.3-3 [87.5 kB] 364s Get:23 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 python-babel-localedata all 2.10.3-3 [6356 kB] 365s Get:24 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 python3-certifi all 2023.7.22-1 [153 kB] 365s Get:25 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 python3-pyparsing all 3.1.1-1 [86.2 kB] 365s Get:26 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 secureboot-db arm64 1.9 [7408 B] 365s Preconfiguring packages ... 365s Fetched 14.4 MB in 3s (4731 kB/s) 365s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72257 files and directories currently installed.) 365s Preparing to unpack .../bash_5.2.15-2ubuntu2_arm64.deb ... 365s Unpacking bash (5.2.15-2ubuntu2) over (5.2.15-2ubuntu1) ... 365s Setting up bash (5.2.15-2ubuntu2) ... 365s update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode 365s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72257 files and directories currently installed.) 365s Preparing to unpack .../python3-minimal_3.11.4-5ubuntu1_arm64.deb ... 365s Unpacking python3-minimal (3.11.4-5ubuntu1) over (3.11.4-5) ... 365s Setting up python3-minimal (3.11.4-5ubuntu1) ... 366s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72257 files and directories currently installed.) 366s Preparing to unpack .../python3_3.11.4-5ubuntu1_arm64.deb ... 366s Unpacking python3 (3.11.4-5ubuntu1) over (3.11.4-5) ... 366s Preparing to unpack .../libpython3-stdlib_3.11.4-5ubuntu1_arm64.deb ... 366s Unpacking libpython3-stdlib:arm64 (3.11.4-5ubuntu1) over (3.11.4-5) ... 366s Preparing to unpack .../libgpg-error-l10n_1.47-3_all.deb ... 366s Unpacking libgpg-error-l10n (1.47-3) over (1.47-2) ... 366s Preparing to unpack .../libgpg-error0_1.47-3_arm64.deb ... 366s Unpacking libgpg-error0:arm64 (1.47-3) over (1.47-2) ... 366s Setting up libgpg-error0:arm64 (1.47-3) ... 366s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72257 files and directories currently installed.) 366s Preparing to unpack .../libgnutls30_3.8.1-4ubuntu4_arm64.deb ... 366s Unpacking libgnutls30:arm64 (3.8.1-4ubuntu4) over (3.8.1-4ubuntu1) ... 366s Setting up libgnutls30:arm64 (3.8.1-4ubuntu4) ... 366s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72258 files and directories currently installed.) 366s Preparing to unpack .../libseccomp2_2.5.4-2ubuntu1_arm64.deb ... 366s Unpacking libseccomp2:arm64 (2.5.4-2ubuntu1) over (2.5.4-1ubuntu3) ... 366s Setting up libseccomp2:arm64 (2.5.4-2ubuntu1) ... 366s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72258 files and directories currently installed.) 366s Preparing to unpack .../00-libsqlite3-0_3.44.0-1_arm64.deb ... 366s Unpacking libsqlite3-0:arm64 (3.44.0-1) over (3.42.0-1) ... 366s Preparing to unpack .../01-libssl3_3.0.10-1ubuntu3_arm64.deb ... 366s Unpacking libssl3:arm64 (3.0.10-1ubuntu3) over (3.0.10-1ubuntu2.1) ... 366s Preparing to unpack .../02-openssl_3.0.10-1ubuntu3_arm64.deb ... 366s Unpacking openssl (3.0.10-1ubuntu3) over (3.0.10-1ubuntu2.1) ... 366s Preparing to unpack .../03-libuv1_1.46.0-2_arm64.deb ... 366s Unpacking libuv1:arm64 (1.46.0-2) over (1.44.2-1) ... 366s Preparing to unpack .../04-man-db_2.12.0-1_arm64.deb ... 366s Unpacking man-db (2.12.0-1) over (2.11.2-3) ... 366s Preparing to unpack .../05-jq_1.7-1_arm64.deb ... 366s Unpacking jq (1.7-1) over (1.6-3) ... 366s Preparing to unpack .../06-libjq1_1.7-1_arm64.deb ... 366s Unpacking libjq1:arm64 (1.7-1) over (1.6-3) ... 366s Preparing to unpack .../07-libarchive13_3.7.2-1ubuntu1_arm64.deb ... 366s Unpacking libarchive13:arm64 (3.7.2-1ubuntu1) over (3.6.2-1ubuntu1) ... 366s Preparing to unpack .../08-libgpgme11_1.18.0-4ubuntu1_arm64.deb ... 366s Unpacking libgpgme11:arm64 (1.18.0-4ubuntu1) over (1.18.0-3ubuntu2) ... 366s Preparing to unpack .../09-libsasl2-modules-db_2.1.28+dfsg1-4_arm64.deb ... 366s Unpacking libsasl2-modules-db:arm64 (2.1.28+dfsg1-4) over (2.1.28+dfsg1-3) ... 366s Preparing to unpack .../10-libsasl2-2_2.1.28+dfsg1-4_arm64.deb ... 366s Unpacking libsasl2-2:arm64 (2.1.28+dfsg1-4) over (2.1.28+dfsg1-3) ... 366s Preparing to unpack .../11-libsasl2-modules_2.1.28+dfsg1-4_arm64.deb ... 366s Unpacking libsasl2-modules:arm64 (2.1.28+dfsg1-4) over (2.1.28+dfsg1-3) ... 366s Preparing to unpack .../12-python3-tz_2023.3.post1-1_all.deb ... 366s Unpacking python3-tz (2023.3.post1-1) over (2023.3-4) ... 367s Preparing to unpack .../13-python3-babel_2.10.3-3_all.deb ... 367s Unpacking python3-babel (2.10.3-3) over (2.10.3-2) ... 367s Preparing to unpack .../14-python-babel-localedata_2.10.3-3_all.deb ... 367s Unpacking python-babel-localedata (2.10.3-3) over (2.10.3-2) ... 367s Preparing to unpack .../15-python3-certifi_2023.7.22-1_all.deb ... 367s Unpacking python3-certifi (2023.7.22-1) over (2022.9.24-1) ... 367s Preparing to unpack .../16-python3-pyparsing_3.1.1-1_all.deb ... 367s Unpacking python3-pyparsing (3.1.1-1) over (3.1.0-1) ... 367s Preparing to unpack .../17-secureboot-db_1.9_arm64.deb ... 367s Unpacking secureboot-db (1.9) over (1.8) ... 368s Setting up libarchive13:arm64 (3.7.2-1ubuntu1) ... 368s Setting up libjq1:arm64 (1.7-1) ... 368s Setting up libsqlite3-0:arm64 (3.44.0-1) ... 368s Setting up libssl3:arm64 (3.0.10-1ubuntu3) ... 368s Setting up secureboot-db (1.9) ... 368s Setting up man-db (2.12.0-1) ... 369s Updating database of manual pages ... 371s man-db.service is a disabled or a static unit not running, not starting it. 371s Setting up libgpgme11:arm64 (1.18.0-4ubuntu1) ... 371s Setting up python-babel-localedata (2.10.3-3) ... 371s Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-4) ... 371s Setting up libuv1:arm64 (1.46.0-2) ... 371s Setting up libsasl2-2:arm64 (2.1.28+dfsg1-4) ... 371s Setting up jq (1.7-1) ... 371s Setting up openssl (3.0.10-1ubuntu3) ... 371s Setting up libgpg-error-l10n (1.47-3) ... 371s Setting up libpython3-stdlib:arm64 (3.11.4-5ubuntu1) ... 371s Setting up libsasl2-modules:arm64 (2.1.28+dfsg1-4) ... 371s Setting up python3 (3.11.4-5ubuntu1) ... 371s Setting up python3-tz (2023.3.post1-1) ... 372s Setting up python3-pyparsing (3.1.1-1) ... 372s Setting up python3-certifi (2023.7.22-1) ... 372s Setting up python3-babel (2.10.3-3) ... 372s Processing triggers for debianutils (5.14) ... 372s Processing triggers for install-info (7.1-1) ... 372s Processing triggers for libc-bin (2.38-3ubuntu1) ... 372s Reading package lists... 373s Building dependency tree... 373s Reading state information... 373s The following packages will be REMOVED: 373s libunistring2* 373s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. 373s After this operation, 1815 kB disk space will be freed. 373s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72257 files and directories currently installed.) 373s Removing libunistring2:arm64 (1.0-2) ... 373s Processing triggers for libc-bin (2.38-3ubuntu1) ... 374s autopkgtest [18:36:00]: rebooting testbed after setup commands that affected boot 562s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 595s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 604s autopkgtest [18:39:50]: testbed running kernel: Linux 6.5.0-9-generic #9-Ubuntu SMP PREEMPT_DYNAMIC Fri Oct 6 20:34:49 UTC 2023 605s autopkgtest [18:39:51]: testbed dpkg architecture: arm64 606s autopkgtest [18:39:52]: @@@@@@@@@@@@@@@@@@@@ apt-source python-fabio 608s Get:1 http://ftpmaster.internal/ubuntu noble/universe python-fabio 2023.6.0-3build1 (dsc) [2973 B] 608s Get:2 http://ftpmaster.internal/ubuntu noble/universe python-fabio 2023.6.0-3build1 (tar) [713 kB] 608s Get:3 http://ftpmaster.internal/ubuntu noble/universe python-fabio 2023.6.0-3build1 (diff) [8664 B] 608s gpgv: Signature made Thu Nov 2 19:23:52 2023 UTC 608s gpgv: using RSA key D56571B88A8BBAF140BF63D6BD7EAA60778FA6F5 608s gpgv: issuer "doko@ubuntu.com" 608s gpgv: Can't check signature: No public key 608s dpkg-source: warning: cannot verify inline signature for ./python-fabio_2023.6.0-3build1.dsc: no acceptable signature found 608s autopkgtest [18:39:54]: testing package python-fabio version 2023.6.0-3build1 608s autopkgtest [18:39:54]: build not needed 609s autopkgtest [18:39:55]: test command1: preparing testbed 610s Reading package lists... 611s Building dependency tree... 611s Reading state information... 611s Correcting dependencies...Starting pkgProblemResolver with broken count: 0 611s Starting 2 pkgProblemResolver with broken count: 0 611s Done 611s Done 612s Starting pkgProblemResolver with broken count: 0 612s Starting 2 pkgProblemResolver with broken count: 0 612s Done 612s The following additional packages will be installed: 612s blt cpp cpp-13 fontconfig fontconfig-config fonts-dejavu-core 612s fonts-dejavu-mono fonts-lyx g++ g++-13 gcc gcc-13 libaec0 libasan8 612s libatomic1 libavahi-client3 libavahi-common-data libavahi-common3 libblas3 612s libboost-dev libboost1.74-dev libc-dev-bin libc6-dev libcc1-0 libcrypt-dev 612s libcups2 libdeflate0 libdouble-conversion3 libdrm-amdgpu1 libdrm-nouveau2 612s libdrm-radeon1 libegl-mesa0 libegl1 libevdev2 libexpat1-dev libfontconfig1 612s libgbm1 libgcc-13-dev libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa 612s libglvnd0 libglx-mesa0 libglx0 libgomp1 libgraphite2-3 libharfbuzz0b 612s libhdf5-103-1 libhdf5-hl-100 libhwasan0 libice6 libimagequant0 libinput-bin 612s libinput10 libisl23 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery 612s libjs-jquery-ui libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 612s liblcms2-2 liblerc4 libllvm15 liblsan0 liblzf1 libmd4c0 libmpc3 libmtdev1 612s libnsl-dev libopenblas-dev libopenblas-pthread-dev libopenblas0 612s libopenblas0-pthread libopenjp2-7 libpcre2-16-0 libpython3-all-dev 612s libpython3-dev libpython3.11 libpython3.11-dev libpython3.12 612s libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib libqhull-r8.0 612s libqt5core5a libqt5dbus5 libqt5designer5 libqt5gui5 libqt5help5 612s libqt5network5 libqt5printsupport5 libqt5sql5 libqt5test5 libqt5widgets5 612s libqt5xml5 libraqm0 libsensors-config libsensors5 libsharpyuv0 libsm6 612s libstdc++-13-dev libsz2 libtcl8.6 libtiff6 libtirpc-dev libtk8.6 libtsan2 612s libubsan1 libwacom-common libwacom9 libwayland-client0 libwayland-server0 612s libwebp7 libwebpdemux2 libwebpmux3 libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 612s libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 612s libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 612s libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 612s libxcb-xkb1 libxfixes3 libxft2 libxkbcommon-x11-0 libxkbcommon0 libxrender1 612s libxshmfence1 libxsimd-dev libxslt1.1 libxss1 libxxf86vm1 linux-libc-dev 612s python-matplotlib-data python3-all python3-all-dev python3-appdirs 612s python3-beniget python3-brotli python3-contourpy python3-cycler 612s python3-dateutil python3-decorator python3-dev python3-distutils 612s python3-fabio python3-fonttools python3-fs python3-gast python3-h5py 612s python3-h5py-serial python3-kiwisolver python3-lib2to3 python3-lxml 612s python3-lz4 python3-matplotlib python3-mpmath python3-numpy 612s python3-packaging python3-pil python3-pil.imagetk python3-ply python3-pyqt5 612s python3-pyqt5.sip python3-pythran python3-scipy python3-setuptools 612s python3-sympy python3-tk python3-ufolib2 python3.11-dev python3.12 612s python3.12-dev python3.12-minimal rpcsvc-proto tk8.6-blt2.5 unicode-data 612s x11-common zlib1g-dev 612s Suggested packages: 612s blt-demo cpp-doc gcc-13-locales cpp-13-doc gcc-13-doc gcc-multilib 612s manpages-dev autoconf automake libtool flex bison gdb gcc-doc libboost-doc 612s libboost1.74-doc libboost-atomic1.74-dev libboost-chrono1.74-dev 612s libboost-container1.74-dev libboost-context1.74-dev 612s libboost-contract1.74-dev libboost-coroutine1.74-dev 612s libboost-date-time1.74-dev libboost-exception1.74-dev libboost-fiber1.74-dev 612s libboost-filesystem1.74-dev libboost-graph1.74-dev 612s libboost-graph-parallel1.74-dev libboost-iostreams1.74-dev 612s libboost-locale1.74-dev libboost-log1.74-dev libboost-math1.74-dev 612s libboost-mpi1.74-dev libboost-mpi-python1.74-dev libboost-numpy1.74-dev 612s libboost-program-options1.74-dev libboost-python1.74-dev 612s libboost-random1.74-dev libboost-regex1.74-dev 612s libboost-serialization1.74-dev libboost-stacktrace1.74-dev 612s libboost-system1.74-dev libboost-test1.74-dev libboost-thread1.74-dev 612s libboost-timer1.74-dev libboost-type-erasure1.74-dev libboost-wave1.74-dev 612s libboost1.74-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.74-dev 612s glibc-doc cups-common libjs-jquery-ui-docs liblcms2-utils libthai0 612s qgnomeplatform-qt5 qt5-image-formats-plugins lm-sensors libstdc++-13-doc 612s tcl8.6 tk8.6 libwacom-bin libxsimd-doc python-cycler-doc python-fabio-doc 612s python-h5py-doc python-lxml-doc cm-super-minimal dvipng ffmpeg 612s fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common 612s python3-cairocffi python3-gi-cairo python3-gobject python3-sip 612s python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc 612s python3-gmpy2 gfortran python3-pytest python-pil-doc python-ply-doc 612s python-scipy-doc python-setuptools-doc texlive-fonts-extra python-sympy-doc 612s tix python3-tk-dbg python3.12-venv python3.12-doc binfmt-support 612s Recommended packages: 612s manpages manpages-dev libc-devtools libgl1-amber-dri javascript-common 612s qttranslations5-l10n libqt5svg5 qt5-gtk-platformtheme qtwayland5 612s libqt5sql5-sqlite | libqt5sql5-mysql | libqt5sql5-odbc | libqt5sql5-psql 612s | libqt5sql5-tds | libqt5sql5-ibase python3-bs4 python3-html5lib 612s python3-olefile isympy-common 612s The following NEW packages will be installed: 612s blt cpp cpp-13 fontconfig fontconfig-config fonts-dejavu-core 612s fonts-dejavu-mono fonts-lyx g++ g++-13 gcc gcc-13 libaec0 libasan8 612s libatomic1 libavahi-client3 libavahi-common-data libavahi-common3 libblas3 612s libboost-dev libboost1.74-dev libc-dev-bin libc6-dev libcc1-0 libcrypt-dev 612s libcups2 libdeflate0 libdouble-conversion3 libdrm-amdgpu1 libdrm-nouveau2 612s libdrm-radeon1 libegl-mesa0 libegl1 libevdev2 libexpat1-dev libfontconfig1 612s libgbm1 libgcc-13-dev libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa 612s libglvnd0 libglx-mesa0 libglx0 libgomp1 libgraphite2-3 libharfbuzz0b 612s libhdf5-103-1 libhdf5-hl-100 libhwasan0 libice6 libimagequant0 libinput-bin 612s libinput10 libisl23 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery 612s libjs-jquery-ui libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 612s liblcms2-2 liblerc4 libllvm15 liblsan0 liblzf1 libmd4c0 libmpc3 libmtdev1 612s libnsl-dev libopenblas-dev libopenblas-pthread-dev libopenblas0 612s libopenblas0-pthread libopenjp2-7 libpcre2-16-0 libpython3-all-dev 612s libpython3-dev libpython3.11 libpython3.11-dev libpython3.12 612s libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib libqhull-r8.0 612s libqt5core5a libqt5dbus5 libqt5designer5 libqt5gui5 libqt5help5 612s libqt5network5 libqt5printsupport5 libqt5sql5 libqt5test5 libqt5widgets5 612s libqt5xml5 libraqm0 libsensors-config libsensors5 libsharpyuv0 libsm6 612s libstdc++-13-dev libsz2 libtcl8.6 libtiff6 libtirpc-dev libtk8.6 libtsan2 612s libubsan1 libwacom-common libwacom9 libwayland-client0 libwayland-server0 612s libwebp7 libwebpdemux2 libwebpmux3 libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 612s libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 612s libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 612s libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 612s libxcb-xkb1 libxfixes3 libxft2 libxkbcommon-x11-0 libxkbcommon0 libxrender1 612s libxshmfence1 libxsimd-dev libxslt1.1 libxss1 libxxf86vm1 linux-libc-dev 612s python-matplotlib-data python3-all python3-all-dev python3-appdirs 612s python3-beniget python3-brotli python3-contourpy python3-cycler 612s python3-dateutil python3-decorator python3-dev python3-distutils 612s python3-fabio python3-fonttools python3-fs python3-gast python3-h5py 612s python3-h5py-serial python3-kiwisolver python3-lib2to3 python3-lxml 612s python3-lz4 python3-matplotlib python3-mpmath python3-numpy 612s python3-packaging python3-pil python3-pil.imagetk python3-ply python3-pyqt5 612s python3-pyqt5.sip python3-pythran python3-scipy python3-setuptools 612s python3-sympy python3-tk python3-ufolib2 python3.11-dev python3.12 612s python3.12-dev python3.12-minimal rpcsvc-proto tk8.6-blt2.5 unicode-data 612s x11-common zlib1g-dev 613s 0 upgraded, 197 newly installed, 0 to remove and 0 not upgraded. 613s 1 not fully installed or removed. 613s Need to get 215 MB of archives. 613s After this operation, 1029 MB of additional disk space will be used. 613s Get:1 http://ftpmaster.internal/ubuntu noble/main arm64 python3-lib2to3 all 3.11.5-1 [79.0 kB] 613s Get:2 http://ftpmaster.internal/ubuntu noble/main arm64 python3-distutils all 3.11.5-1 [131 kB] 613s Get:3 http://ftpmaster.internal/ubuntu noble/main arm64 libpython3.12-minimal arm64 3.12.0-5 [826 kB] 613s Get:4 http://ftpmaster.internal/ubuntu noble/main arm64 python3.12-minimal arm64 3.12.0-5 [2298 kB] 613s Get:5 http://ftpmaster.internal/ubuntu noble/main arm64 libpython3.12-stdlib arm64 3.12.0-5 [1997 kB] 614s Get:6 http://ftpmaster.internal/ubuntu noble/main arm64 python3.12 arm64 3.12.0-5 [629 kB] 614s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 python3-all arm64 3.11.4-5ubuntu1 [910 B] 614s Get:8 http://ftpmaster.internal/ubuntu noble/main arm64 libblas3 arm64 3.11.0-2build1 [143 kB] 614s Get:9 http://ftpmaster.internal/ubuntu noble/main arm64 libgfortran5 arm64 13.2.0-6ubuntu1 [423 kB] 614s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 libopenblas0-pthread arm64 0.3.25+ds-1 [5445 kB] 614s Get:11 http://ftpmaster.internal/ubuntu noble/main arm64 liblapack3 arm64 3.11.0-2build1 [2134 kB] 615s Get:12 http://ftpmaster.internal/ubuntu noble/main arm64 python3-numpy arm64 1:1.24.2-1ubuntu1 [4525 kB] 615s Get:13 http://ftpmaster.internal/ubuntu noble/universe arm64 libaec0 arm64 1.1.2-1 [21.7 kB] 615s Get:14 http://ftpmaster.internal/ubuntu noble/universe arm64 libsz2 arm64 1.1.2-1 [5168 B] 615s Get:15 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-103-1 arm64 1.10.8+repack1-1ubuntu1 [1185 kB] 615s Get:16 http://ftpmaster.internal/ubuntu noble/universe arm64 libhdf5-hl-100 arm64 1.10.8+repack1-1ubuntu1 [54.9 kB] 615s Get:17 http://ftpmaster.internal/ubuntu noble/universe arm64 liblzf1 arm64 3.6-4 [7426 B] 615s Get:18 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 python3-h5py-serial arm64 3.9.0-4build1 [1448 kB] 616s Get:19 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 python3-h5py all 3.9.0-4build1 [7966 B] 616s Get:20 http://ftpmaster.internal/ubuntu noble/main arm64 libxslt1.1 arm64 1.1.35-1 [161 kB] 616s Get:21 http://ftpmaster.internal/ubuntu noble/main arm64 python3-lxml arm64 4.9.3-1build1 [2001 kB] 616s Get:22 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 616s Get:23 http://ftpmaster.internal/ubuntu noble/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 616s Get:24 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 616s Get:25 http://ftpmaster.internal/ubuntu noble/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 616s Get:26 http://ftpmaster.internal/ubuntu noble/universe arm64 fonts-lyx all 2.3.7-1 [167 kB] 616s Get:27 http://ftpmaster.internal/ubuntu noble/universe arm64 python-matplotlib-data all 3.6.3-1ubuntu3 [2936 kB] 616s Get:28 http://ftpmaster.internal/ubuntu noble/main arm64 python3-dateutil all 2.8.2-3 [79.2 kB] 616s Get:29 http://ftpmaster.internal/ubuntu noble/main arm64 libgomp1 arm64 13.2.0-6ubuntu1 [134 kB] 616s Get:30 http://ftpmaster.internal/ubuntu noble/main arm64 libimagequant0 arm64 2.18.0-1 [37.0 kB] 616s Get:31 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg-turbo8 arm64 2.1.5-2ubuntu1 [160 kB] 616s Get:32 http://ftpmaster.internal/ubuntu noble/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 616s Get:33 http://ftpmaster.internal/ubuntu noble/main arm64 liblcms2-2 arm64 2.14-2 [159 kB] 616s Get:34 http://ftpmaster.internal/ubuntu noble/main arm64 libopenjp2-7 arm64 2.5.0-2 [170 kB] 616s Get:35 http://ftpmaster.internal/ubuntu noble/main arm64 libgraphite2-3 arm64 1.3.14-1build2 [68.9 kB] 616s Get:36 http://ftpmaster.internal/ubuntu noble/main arm64 libharfbuzz0b arm64 8.0.1-1 [451 kB] 616s Get:37 http://ftpmaster.internal/ubuntu noble/main arm64 libraqm0 arm64 0.10.1-1 [14.4 kB] 616s Get:38 http://ftpmaster.internal/ubuntu noble/main arm64 libdeflate0 arm64 1.18-1 [42.6 kB] 616s Get:39 http://ftpmaster.internal/ubuntu noble/main arm64 libjbig0 arm64 2.1-6.1ubuntu1 [28.9 kB] 616s Get:40 http://ftpmaster.internal/ubuntu noble/main arm64 liblerc4 arm64 4.0.0+ds-2ubuntu2 [150 kB] 616s Get:41 http://ftpmaster.internal/ubuntu noble/main arm64 libsharpyuv0 arm64 1.3.2-0.3 [14.0 kB] 616s Get:42 http://ftpmaster.internal/ubuntu noble/main arm64 libwebp7 arm64 1.3.2-0.3 [190 kB] 616s Get:43 http://ftpmaster.internal/ubuntu noble/main arm64 libtiff6 arm64 4.5.1+git230720-1ubuntu1 [189 kB] 616s Get:44 http://ftpmaster.internal/ubuntu noble/main arm64 libwebpdemux2 arm64 1.3.2-0.3 [12.1 kB] 616s Get:45 http://ftpmaster.internal/ubuntu noble/main arm64 libwebpmux3 arm64 1.3.2-0.3 [25.0 kB] 617s Get:46 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 python3-pil arm64 10.1.0-1 [476 kB] 617s Get:47 http://ftpmaster.internal/ubuntu noble/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [980 kB] 617s Get:48 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig-config arm64 2.14.2-4ubuntu1 [35.8 kB] 617s Get:49 http://ftpmaster.internal/ubuntu noble/main arm64 libfontconfig1 arm64 2.14.2-4ubuntu1 [139 kB] 617s Get:50 http://ftpmaster.internal/ubuntu noble/main arm64 libxrender1 arm64 1:0.9.10-1.1 [19.1 kB] 617s Get:51 http://ftpmaster.internal/ubuntu noble/main arm64 libxft2 arm64 2.3.6-1 [43.3 kB] 617s Get:52 http://ftpmaster.internal/ubuntu noble/main arm64 x11-common all 1:7.7+23ubuntu2 [23.4 kB] 617s Get:53 http://ftpmaster.internal/ubuntu noble/main arm64 libxss1 arm64 1:1.2.3-1build2 [8252 B] 617s Get:54 http://ftpmaster.internal/ubuntu noble/main arm64 libtk8.6 arm64 8.6.13-2 [760 kB] 617s Get:55 http://ftpmaster.internal/ubuntu noble/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-4.1build2 [625 kB] 617s Get:56 http://ftpmaster.internal/ubuntu noble/main arm64 blt arm64 2.5.3+dfsg-4.1build2 [4838 B] 617s Get:57 http://ftpmaster.internal/ubuntu noble/main arm64 python3-tk arm64 3.11.5-1 [112 kB] 617s Get:58 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 python3-pil.imagetk arm64 10.1.0-1 [9690 B] 617s Get:59 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-contourpy arm64 1.0.7-1build2 [244 kB] 617s Get:60 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-cycler all 0.11.0-1 [8156 B] 617s Get:61 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-brotli arm64 1.1.0-1 [344 kB] 617s Get:62 http://ftpmaster.internal/ubuntu noble/main arm64 python3-decorator all 5.1.1-5 [10.1 kB] 617s Get:63 http://ftpmaster.internal/ubuntu noble/main arm64 libisl23 arm64 0.26-3 [713 kB] 617s Get:64 http://ftpmaster.internal/ubuntu noble/main arm64 libmpc3 arm64 1.3.1-1 [55.3 kB] 617s Get:65 http://ftpmaster.internal/ubuntu noble/main arm64 cpp-13 arm64 13.2.0-6ubuntu1 [9537 kB] 618s Get:66 http://ftpmaster.internal/ubuntu noble/main arm64 cpp arm64 4:13.2.0-1ubuntu1 [28.9 kB] 618s Get:67 http://ftpmaster.internal/ubuntu noble/main arm64 libcc1-0 arm64 13.2.0-6ubuntu1 [49.6 kB] 618s Get:68 http://ftpmaster.internal/ubuntu noble/main arm64 libitm1 arm64 13.2.0-6ubuntu1 [27.9 kB] 618s Get:69 http://ftpmaster.internal/ubuntu noble/main arm64 libatomic1 arm64 13.2.0-6ubuntu1 [11.6 kB] 618s Get:70 http://ftpmaster.internal/ubuntu noble/main arm64 libasan8 arm64 13.2.0-6ubuntu1 [2751 kB] 618s Get:71 http://ftpmaster.internal/ubuntu noble/main arm64 liblsan0 arm64 13.2.0-6ubuntu1 [1185 kB] 618s Get:72 http://ftpmaster.internal/ubuntu noble/main arm64 libtsan2 arm64 13.2.0-6ubuntu1 [2630 kB] 619s Get:73 http://ftpmaster.internal/ubuntu noble/main arm64 libubsan1 arm64 13.2.0-6ubuntu1 [1090 kB] 619s Get:74 http://ftpmaster.internal/ubuntu noble/main arm64 libhwasan0 arm64 13.2.0-6ubuntu1 [1243 kB] 619s Get:75 http://ftpmaster.internal/ubuntu noble/main arm64 libgcc-13-dev arm64 13.2.0-6ubuntu1 [2463 kB] 619s Get:76 http://ftpmaster.internal/ubuntu noble/main arm64 gcc-13 arm64 13.2.0-6ubuntu1 [19.1 MB] 622s Get:77 http://ftpmaster.internal/ubuntu noble/main arm64 gcc arm64 4:13.2.0-1ubuntu1 [5190 B] 622s Get:78 http://ftpmaster.internal/ubuntu noble/main arm64 libc-dev-bin arm64 2.38-3ubuntu1 [19.4 kB] 622s Get:79 http://ftpmaster.internal/ubuntu noble/main arm64 linux-libc-dev arm64 6.5.0-9.9 [1538 kB] 622s Get:80 http://ftpmaster.internal/ubuntu noble/main arm64 libcrypt-dev arm64 1:4.4.36-2 [118 kB] 622s Get:81 http://ftpmaster.internal/ubuntu noble/main arm64 libtirpc-dev arm64 1.3.4+ds-1 [201 kB] 622s Get:82 http://ftpmaster.internal/ubuntu noble/main arm64 libnsl-dev arm64 1.3.0-3 [71.9 kB] 622s Get:83 http://ftpmaster.internal/ubuntu noble/main arm64 rpcsvc-proto arm64 1.4.2-0ubuntu6 [65.4 kB] 622s Get:84 http://ftpmaster.internal/ubuntu noble/main arm64 libc6-dev arm64 2.38-3ubuntu1 [1573 kB] 622s Get:85 http://ftpmaster.internal/ubuntu noble/main arm64 libstdc++-13-dev arm64 13.2.0-6ubuntu1 [2346 kB] 622s Get:86 http://ftpmaster.internal/ubuntu noble/main arm64 g++-13 arm64 13.2.0-6ubuntu1 [10.9 MB] 623s Get:87 http://ftpmaster.internal/ubuntu noble/main arm64 g++ arm64 4:13.2.0-1ubuntu1 [1108 B] 623s Get:88 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 libopenblas0 arm64 0.3.25+ds-1 [6166 B] 623s Get:89 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 libopenblas-pthread-dev arm64 0.3.25+ds-1 [3683 kB] 624s Get:90 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 libopenblas-dev arm64 0.3.25+ds-1 [19.4 kB] 624s Get:91 http://ftpmaster.internal/ubuntu noble/main arm64 libboost1.74-dev arm64 1.74.0+ds1-23ubuntu2 [9584 kB] 625s Get:92 http://ftpmaster.internal/ubuntu noble/main arm64 libboost-dev arm64 1.74.0.3ubuntu7 [3490 B] 625s Get:93 http://ftpmaster.internal/ubuntu noble/main arm64 libpython3.11 arm64 3.11.6-3 [2165 kB] 625s Get:94 http://ftpmaster.internal/ubuntu noble/main arm64 libexpat1-dev arm64 2.5.0-2 [123 kB] 625s Get:95 http://ftpmaster.internal/ubuntu noble/main arm64 zlib1g-dev arm64 1:1.2.13.dfsg-1ubuntu5 [893 kB] 625s Get:96 http://ftpmaster.internal/ubuntu noble/main arm64 libpython3.11-dev arm64 3.11.6-3 [5001 kB] 626s Get:97 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpython3-dev arm64 3.11.4-5ubuntu1 [9822 B] 626s Get:98 http://ftpmaster.internal/ubuntu noble/main arm64 libpython3.12 arm64 3.12.0-5 [2285 kB] 626s Get:99 http://ftpmaster.internal/ubuntu noble/main arm64 libpython3.12-dev arm64 3.12.0-5 [5387 kB] 627s Get:100 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libpython3-all-dev arm64 3.11.4-5ubuntu1 [916 B] 627s Get:101 http://ftpmaster.internal/ubuntu noble/main arm64 python3.11-dev arm64 3.11.6-3 [508 kB] 627s Get:102 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 627s Get:103 http://ftpmaster.internal/ubuntu noble/main arm64 libjs-sphinxdoc all 7.2.6-2 [149 kB] 627s Get:104 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 python3-dev arm64 3.11.4-5ubuntu1 [26.8 kB] 627s Get:105 http://ftpmaster.internal/ubuntu noble/main arm64 python3.12-dev arm64 3.12.0-5 [506 kB] 627s Get:106 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 python3-all-dev arm64 3.11.4-5ubuntu1 [920 B] 627s Get:107 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 libxsimd-dev arm64 10.0.0-3 [103 kB] 627s Get:108 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-gast all 0.5.2-2 [9394 B] 627s Get:109 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-beniget all 0.4.1-3 [10.0 kB] 627s Get:110 http://ftpmaster.internal/ubuntu noble/main arm64 python3-ply all 3.11-5 [47.5 kB] 627s Get:111 http://ftpmaster.internal/ubuntu noble-proposed/universe arm64 python3-pythran arm64 0.14.0+ds-2 [438 kB] 627s Get:112 http://ftpmaster.internal/ubuntu noble/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1 [27.7 kB] 627s Get:113 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-scipy arm64 1.10.1-5ubuntu1 [18.7 MB] 629s Get:114 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-ufolib2 all 0.16.0+dfsg1-1 [33.5 kB] 629s Get:115 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-mpmath all 1.2.1-2 [419 kB] 629s Get:116 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-sympy all 1.12-6 [3966 kB] 629s Get:117 http://ftpmaster.internal/ubuntu noble/main arm64 python3-appdirs all 1.4.4-4 [10.9 kB] 629s Get:118 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-fs all 2.4.16-2 [91.0 kB] 629s Get:119 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-lz4 arm64 4.0.2+dfsg-1build2 [28.4 kB] 629s Get:120 http://ftpmaster.internal/ubuntu noble/universe arm64 unicode-data all 15.1.0-1 [8878 kB] 629s Get:121 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-fonttools arm64 4.38.0-1build2 [1170 kB] 629s Get:122 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-kiwisolver arm64 1.4.4-1build2 [65.4 kB] 629s Get:123 http://ftpmaster.internal/ubuntu noble/main arm64 python3-packaging all 23.2-1 [40.6 kB] 629s Get:124 http://ftpmaster.internal/ubuntu noble/universe arm64 libqhull-r8.0 arm64 2020.2-6 [188 kB] 630s Get:125 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-matplotlib arm64 3.6.3-1ubuntu3 [7291 kB] 630s Get:126 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pyqt5.sip arm64 12.13.0-1build1 [90.5 kB] 630s Get:127 http://ftpmaster.internal/ubuntu noble/universe arm64 libdouble-conversion3 arm64 3.3.0-1 [37.2 kB] 630s Get:128 http://ftpmaster.internal/ubuntu noble/main arm64 libpcre2-16-0 arm64 10.42-4 [194 kB] 630s Get:129 http://ftpmaster.internal/ubuntu noble/universe arm64 libqt5core5a arm64 5.15.10+dfsg-5 [1958 kB] 630s Get:130 http://ftpmaster.internal/ubuntu noble/universe arm64 libqt5dbus5 arm64 5.15.10+dfsg-5 [222 kB] 630s Get:131 http://ftpmaster.internal/ubuntu noble/main arm64 fontconfig arm64 2.14.2-4ubuntu1 [190 kB] 630s Get:132 http://ftpmaster.internal/ubuntu noble/main arm64 libglvnd0 arm64 1.7.0-1 [60.0 kB] 630s Get:133 http://ftpmaster.internal/ubuntu noble/main arm64 libwayland-server0 arm64 1.22.0-2.1 [34.0 kB] 630s Get:134 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-randr0 arm64 1.15-1 [18.2 kB] 630s Get:135 http://ftpmaster.internal/ubuntu noble/main arm64 libgbm1 arm64 23.2.1-1ubuntu4 [40.9 kB] 630s Get:136 http://ftpmaster.internal/ubuntu noble/main arm64 libglapi-mesa arm64 23.2.1-1ubuntu4 [54.6 kB] 630s Get:137 http://ftpmaster.internal/ubuntu noble/main arm64 libwayland-client0 arm64 1.22.0-2.1 [25.6 kB] 630s Get:138 http://ftpmaster.internal/ubuntu noble/main arm64 libx11-xcb1 arm64 2:1.8.7-1 [7836 B] 630s Get:139 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-dri2-0 arm64 1.15-1 [7244 B] 630s Get:140 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-dri3-0 arm64 1.15-1 [7108 B] 630s Get:141 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-present0 arm64 1.15-1 [5732 B] 630s Get:142 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-sync1 arm64 1.15-1 [9412 B] 630s Get:143 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-xfixes0 arm64 1.15-1 [10.3 kB] 630s Get:144 http://ftpmaster.internal/ubuntu noble/main arm64 libxshmfence1 arm64 1.3-1build4 [5444 B] 630s Get:145 http://ftpmaster.internal/ubuntu noble/main arm64 libegl-mesa0 arm64 23.2.1-1ubuntu4 [114 kB] 630s Get:146 http://ftpmaster.internal/ubuntu noble/main arm64 libegl1 arm64 1.7.0-1 [29.2 kB] 630s Get:147 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-glx0 arm64 1.15-1 [25.2 kB] 630s Get:148 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shm0 arm64 1.15-1 [5780 B] 630s Get:149 http://ftpmaster.internal/ubuntu noble/main arm64 libxfixes3 arm64 1:6.0.0-2 [11.0 kB] 630s Get:150 http://ftpmaster.internal/ubuntu noble/main arm64 libxxf86vm1 arm64 1:1.1.4-1build3 [10.3 kB] 630s Get:151 http://ftpmaster.internal/ubuntu noble/main arm64 libdrm-amdgpu1 arm64 2.4.117-1 [20.2 kB] 630s Get:152 http://ftpmaster.internal/ubuntu noble/main arm64 libdrm-nouveau2 arm64 2.4.117-1 [17.8 kB] 630s Get:153 http://ftpmaster.internal/ubuntu noble/main arm64 libdrm-radeon1 arm64 2.4.117-1 [20.6 kB] 630s Get:154 http://ftpmaster.internal/ubuntu noble-proposed/main arm64 libllvm15 arm64 1:15.0.7-10build1 [24.4 MB] 631s Get:155 http://ftpmaster.internal/ubuntu noble/main arm64 libsensors-config all 1:3.6.0-7ubuntu1 [5274 B] 631s Get:156 http://ftpmaster.internal/ubuntu noble/main arm64 libsensors5 arm64 1:3.6.0-7ubuntu1 [26.1 kB] 631s Get:157 http://ftpmaster.internal/ubuntu noble/main arm64 libgl1-mesa-dri arm64 23.2.1-1ubuntu4 [8123 kB] 631s Get:158 http://ftpmaster.internal/ubuntu noble/main arm64 libglx-mesa0 arm64 23.2.1-1ubuntu4 [162 kB] 631s Get:159 http://ftpmaster.internal/ubuntu noble/main arm64 libglx0 arm64 1.7.0-1 [32.4 kB] 631s Get:160 http://ftpmaster.internal/ubuntu noble/main arm64 libgl1 arm64 1.7.0-1 [107 kB] 631s Get:161 http://ftpmaster.internal/ubuntu noble/main arm64 libice6 arm64 2:1.0.10-1build2 [41.7 kB] 631s Get:162 http://ftpmaster.internal/ubuntu noble/main arm64 libevdev2 arm64 1.13.1+dfsg-1 [35.1 kB] 631s Get:163 http://ftpmaster.internal/ubuntu noble/main arm64 libmtdev1 arm64 1.1.6-1build4 [14.4 kB] 631s Get:164 http://ftpmaster.internal/ubuntu noble/main arm64 libwacom-common all 2.8.0-1 [61.5 kB] 631s Get:165 http://ftpmaster.internal/ubuntu noble/main arm64 libwacom9 arm64 2.8.0-1 [23.0 kB] 631s Get:166 http://ftpmaster.internal/ubuntu noble/main arm64 libinput-bin arm64 1.23.0-2 [21.1 kB] 631s Get:167 http://ftpmaster.internal/ubuntu noble/main arm64 libinput10 arm64 1.23.0-2 [127 kB] 631s Get:168 http://ftpmaster.internal/ubuntu noble/universe arm64 libmd4c0 arm64 0.4.8-1 [41.2 kB] 631s Get:169 http://ftpmaster.internal/ubuntu noble/universe arm64 libqt5network5 arm64 5.15.10+dfsg-5 [737 kB] 631s Get:170 http://ftpmaster.internal/ubuntu noble/main arm64 libsm6 arm64 2:1.2.3-1build2 [16.1 kB] 631s Get:171 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-icccm4 arm64 0.4.1-1.1build2 [11.0 kB] 631s Get:172 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-util1 arm64 0.4.0-1build2 [11.2 kB] 631s Get:173 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-image0 arm64 0.4.0-2 [11.1 kB] 631s Get:174 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-keysyms1 arm64 0.4.0-1build3 [8606 B] 631s Get:175 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render0 arm64 1.15-1 [16.1 kB] 631s Get:176 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-render-util0 arm64 0.3.9-1build3 [10.2 kB] 631s Get:177 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-shape0 arm64 1.15-1 [6106 B] 631s Get:178 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-xinerama0 arm64 1.15-1 [5434 B] 631s Get:179 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-xinput0 arm64 1.15-1 [33.5 kB] 631s Get:180 http://ftpmaster.internal/ubuntu noble/main arm64 libxcb-xkb1 arm64 1.15-1 [31.7 kB] 631s Get:181 http://ftpmaster.internal/ubuntu noble/main arm64 libxkbcommon0 arm64 1.6.0-1 [121 kB] 631s Get:182 http://ftpmaster.internal/ubuntu noble/main arm64 libxkbcommon-x11-0 arm64 1.6.0-1 [13.6 kB] 631s Get:183 http://ftpmaster.internal/ubuntu noble/universe arm64 libqt5gui5 arm64 5.15.10+dfsg-5 [3562 kB] 631s Get:184 http://ftpmaster.internal/ubuntu noble/universe arm64 libqt5widgets5 arm64 5.15.10+dfsg-5 [2554 kB] 631s Get:185 http://ftpmaster.internal/ubuntu noble/universe arm64 libqt5xml5 arm64 5.15.10+dfsg-5 [124 kB] 631s Get:186 http://ftpmaster.internal/ubuntu noble/universe arm64 libqt5designer5 arm64 5.15.10-5 [2834 kB] 631s Get:187 http://ftpmaster.internal/ubuntu noble/universe arm64 libqt5sql5 arm64 5.15.10+dfsg-5 [123 kB] 631s Get:188 http://ftpmaster.internal/ubuntu noble/universe arm64 libqt5help5 arm64 5.15.10-5 [163 kB] 631s Get:189 http://ftpmaster.internal/ubuntu noble/main arm64 libavahi-common-data arm64 0.8-13ubuntu1 [29.1 kB] 631s Get:190 http://ftpmaster.internal/ubuntu noble/main arm64 libavahi-common3 arm64 0.8-13ubuntu1 [23.1 kB] 631s Get:191 http://ftpmaster.internal/ubuntu noble/main arm64 libavahi-client3 arm64 0.8-13ubuntu1 [27.2 kB] 631s Get:192 http://ftpmaster.internal/ubuntu noble/main arm64 libcups2 arm64 2.4.6-0ubuntu3 [270 kB] 631s Get:193 http://ftpmaster.internal/ubuntu noble/universe arm64 libqt5printsupport5 arm64 5.15.10+dfsg-5 [208 kB] 631s Get:194 http://ftpmaster.internal/ubuntu noble/universe arm64 libqt5test5 arm64 5.15.10+dfsg-5 [143 kB] 631s Get:195 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-pyqt5 arm64 5.15.10+dfsg-1 [2554 kB] 631s Get:196 http://ftpmaster.internal/ubuntu noble/universe arm64 python3-fabio arm64 2023.6.0-3build1 [835 kB] 631s Get:197 http://ftpmaster.internal/ubuntu noble/main arm64 python3-setuptools all 68.1.2-2 [396 kB] 632s Fetched 215 MB in 19s (11.3 MB/s) 632s Selecting previously unselected package python3-lib2to3. 632s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72252 files and directories currently installed.) 632s Preparing to unpack .../000-python3-lib2to3_3.11.5-1_all.deb ... 632s Unpacking python3-lib2to3 (3.11.5-1) ... 632s Selecting previously unselected package python3-distutils. 632s Preparing to unpack .../001-python3-distutils_3.11.5-1_all.deb ... 632s Unpacking python3-distutils (3.11.5-1) ... 632s Selecting previously unselected package libpython3.12-minimal:arm64. 632s Preparing to unpack .../002-libpython3.12-minimal_3.12.0-5_arm64.deb ... 632s Unpacking libpython3.12-minimal:arm64 (3.12.0-5) ... 632s Selecting previously unselected package python3.12-minimal. 632s Preparing to unpack .../003-python3.12-minimal_3.12.0-5_arm64.deb ... 632s Unpacking python3.12-minimal (3.12.0-5) ... 633s Selecting previously unselected package libpython3.12-stdlib:arm64. 633s Preparing to unpack .../004-libpython3.12-stdlib_3.12.0-5_arm64.deb ... 633s Unpacking libpython3.12-stdlib:arm64 (3.12.0-5) ... 633s Selecting previously unselected package python3.12. 633s Preparing to unpack .../005-python3.12_3.12.0-5_arm64.deb ... 633s Unpacking python3.12 (3.12.0-5) ... 633s Selecting previously unselected package python3-all. 633s Preparing to unpack .../006-python3-all_3.11.4-5ubuntu1_arm64.deb ... 633s Unpacking python3-all (3.11.4-5ubuntu1) ... 633s Selecting previously unselected package libblas3:arm64. 633s Preparing to unpack .../007-libblas3_3.11.0-2build1_arm64.deb ... 633s Unpacking libblas3:arm64 (3.11.0-2build1) ... 633s Selecting previously unselected package libgfortran5:arm64. 633s Preparing to unpack .../008-libgfortran5_13.2.0-6ubuntu1_arm64.deb ... 633s Unpacking libgfortran5:arm64 (13.2.0-6ubuntu1) ... 633s Selecting previously unselected package libopenblas0-pthread:arm64. 633s Preparing to unpack .../009-libopenblas0-pthread_0.3.25+ds-1_arm64.deb ... 633s Unpacking libopenblas0-pthread:arm64 (0.3.25+ds-1) ... 633s Selecting previously unselected package liblapack3:arm64. 633s Preparing to unpack .../010-liblapack3_3.11.0-2build1_arm64.deb ... 633s Unpacking liblapack3:arm64 (3.11.0-2build1) ... 633s Selecting previously unselected package python3-numpy. 633s Preparing to unpack .../011-python3-numpy_1%3a1.24.2-1ubuntu1_arm64.deb ... 633s Unpacking python3-numpy (1:1.24.2-1ubuntu1) ... 633s Selecting previously unselected package libaec0:arm64. 633s Preparing to unpack .../012-libaec0_1.1.2-1_arm64.deb ... 633s Unpacking libaec0:arm64 (1.1.2-1) ... 633s Selecting previously unselected package libsz2:arm64. 633s Preparing to unpack .../013-libsz2_1.1.2-1_arm64.deb ... 633s Unpacking libsz2:arm64 (1.1.2-1) ... 633s Selecting previously unselected package libhdf5-103-1:arm64. 633s Preparing to unpack .../014-libhdf5-103-1_1.10.8+repack1-1ubuntu1_arm64.deb ... 633s Unpacking libhdf5-103-1:arm64 (1.10.8+repack1-1ubuntu1) ... 633s Selecting previously unselected package libhdf5-hl-100:arm64. 633s Preparing to unpack .../015-libhdf5-hl-100_1.10.8+repack1-1ubuntu1_arm64.deb ... 633s Unpacking libhdf5-hl-100:arm64 (1.10.8+repack1-1ubuntu1) ... 633s Selecting previously unselected package liblzf1:arm64. 633s Preparing to unpack .../016-liblzf1_3.6-4_arm64.deb ... 633s Unpacking liblzf1:arm64 (3.6-4) ... 633s Selecting previously unselected package python3-h5py-serial. 633s Preparing to unpack .../017-python3-h5py-serial_3.9.0-4build1_arm64.deb ... 633s Unpacking python3-h5py-serial (3.9.0-4build1) ... 633s Selecting previously unselected package python3-h5py. 633s Preparing to unpack .../018-python3-h5py_3.9.0-4build1_all.deb ... 633s Unpacking python3-h5py (3.9.0-4build1) ... 633s Selecting previously unselected package libxslt1.1:arm64. 633s Preparing to unpack .../019-libxslt1.1_1.1.35-1_arm64.deb ... 633s Unpacking libxslt1.1:arm64 (1.1.35-1) ... 633s Selecting previously unselected package python3-lxml:arm64. 633s Preparing to unpack .../020-python3-lxml_4.9.3-1build1_arm64.deb ... 633s Unpacking python3-lxml:arm64 (4.9.3-1build1) ... 634s Selecting previously unselected package libjs-jquery. 634s Preparing to unpack .../021-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 634s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 634s Selecting previously unselected package libjs-jquery-ui. 634s Preparing to unpack .../022-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 634s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 634s Selecting previously unselected package fonts-dejavu-mono. 634s Preparing to unpack .../023-fonts-dejavu-mono_2.37-8_all.deb ... 634s Unpacking fonts-dejavu-mono (2.37-8) ... 634s Selecting previously unselected package fonts-dejavu-core. 634s Preparing to unpack .../024-fonts-dejavu-core_2.37-8_all.deb ... 634s Unpacking fonts-dejavu-core (2.37-8) ... 634s Selecting previously unselected package fonts-lyx. 634s Preparing to unpack .../025-fonts-lyx_2.3.7-1_all.deb ... 634s Unpacking fonts-lyx (2.3.7-1) ... 634s Selecting previously unselected package python-matplotlib-data. 634s Preparing to unpack .../026-python-matplotlib-data_3.6.3-1ubuntu3_all.deb ... 634s Unpacking python-matplotlib-data (3.6.3-1ubuntu3) ... 634s Selecting previously unselected package python3-dateutil. 634s Preparing to unpack .../027-python3-dateutil_2.8.2-3_all.deb ... 634s Unpacking python3-dateutil (2.8.2-3) ... 634s Selecting previously unselected package libgomp1:arm64. 634s Preparing to unpack .../028-libgomp1_13.2.0-6ubuntu1_arm64.deb ... 634s Unpacking libgomp1:arm64 (13.2.0-6ubuntu1) ... 634s Selecting previously unselected package libimagequant0:arm64. 634s Preparing to unpack .../029-libimagequant0_2.18.0-1_arm64.deb ... 634s Unpacking libimagequant0:arm64 (2.18.0-1) ... 634s Selecting previously unselected package libjpeg-turbo8:arm64. 634s Preparing to unpack .../030-libjpeg-turbo8_2.1.5-2ubuntu1_arm64.deb ... 634s Unpacking libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 634s Selecting previously unselected package libjpeg8:arm64. 634s Preparing to unpack .../031-libjpeg8_8c-2ubuntu11_arm64.deb ... 634s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 634s Selecting previously unselected package liblcms2-2:arm64. 634s Preparing to unpack .../032-liblcms2-2_2.14-2_arm64.deb ... 634s Unpacking liblcms2-2:arm64 (2.14-2) ... 634s Selecting previously unselected package libopenjp2-7:arm64. 634s Preparing to unpack .../033-libopenjp2-7_2.5.0-2_arm64.deb ... 634s Unpacking libopenjp2-7:arm64 (2.5.0-2) ... 634s Selecting previously unselected package libgraphite2-3:arm64. 634s Preparing to unpack .../034-libgraphite2-3_1.3.14-1build2_arm64.deb ... 634s Unpacking libgraphite2-3:arm64 (1.3.14-1build2) ... 634s Selecting previously unselected package libharfbuzz0b:arm64. 634s Preparing to unpack .../035-libharfbuzz0b_8.0.1-1_arm64.deb ... 634s Unpacking libharfbuzz0b:arm64 (8.0.1-1) ... 634s Selecting previously unselected package libraqm0:arm64. 634s Preparing to unpack .../036-libraqm0_0.10.1-1_arm64.deb ... 634s Unpacking libraqm0:arm64 (0.10.1-1) ... 634s Selecting previously unselected package libdeflate0:arm64. 634s Preparing to unpack .../037-libdeflate0_1.18-1_arm64.deb ... 634s Unpacking libdeflate0:arm64 (1.18-1) ... 634s Selecting previously unselected package libjbig0:arm64. 634s Preparing to unpack .../038-libjbig0_2.1-6.1ubuntu1_arm64.deb ... 634s Unpacking libjbig0:arm64 (2.1-6.1ubuntu1) ... 634s Selecting previously unselected package liblerc4:arm64. 634s Preparing to unpack .../039-liblerc4_4.0.0+ds-2ubuntu2_arm64.deb ... 634s Unpacking liblerc4:arm64 (4.0.0+ds-2ubuntu2) ... 634s Selecting previously unselected package libsharpyuv0:arm64. 634s Preparing to unpack .../040-libsharpyuv0_1.3.2-0.3_arm64.deb ... 634s Unpacking libsharpyuv0:arm64 (1.3.2-0.3) ... 634s Selecting previously unselected package libwebp7:arm64. 634s Preparing to unpack .../041-libwebp7_1.3.2-0.3_arm64.deb ... 634s Unpacking libwebp7:arm64 (1.3.2-0.3) ... 634s Selecting previously unselected package libtiff6:arm64. 634s Preparing to unpack .../042-libtiff6_4.5.1+git230720-1ubuntu1_arm64.deb ... 634s Unpacking libtiff6:arm64 (4.5.1+git230720-1ubuntu1) ... 634s Selecting previously unselected package libwebpdemux2:arm64. 634s Preparing to unpack .../043-libwebpdemux2_1.3.2-0.3_arm64.deb ... 634s Unpacking libwebpdemux2:arm64 (1.3.2-0.3) ... 634s Selecting previously unselected package libwebpmux3:arm64. 634s Preparing to unpack .../044-libwebpmux3_1.3.2-0.3_arm64.deb ... 634s Unpacking libwebpmux3:arm64 (1.3.2-0.3) ... 634s Selecting previously unselected package python3-pil:arm64. 634s Preparing to unpack .../045-python3-pil_10.1.0-1_arm64.deb ... 634s Unpacking python3-pil:arm64 (10.1.0-1) ... 634s Selecting previously unselected package libtcl8.6:arm64. 634s Preparing to unpack .../046-libtcl8.6_8.6.13+dfsg-2_arm64.deb ... 634s Unpacking libtcl8.6:arm64 (8.6.13+dfsg-2) ... 634s Selecting previously unselected package fontconfig-config. 634s Preparing to unpack .../047-fontconfig-config_2.14.2-4ubuntu1_arm64.deb ... 635s Unpacking fontconfig-config (2.14.2-4ubuntu1) ... 635s Selecting previously unselected package libfontconfig1:arm64. 635s Preparing to unpack .../048-libfontconfig1_2.14.2-4ubuntu1_arm64.deb ... 635s Unpacking libfontconfig1:arm64 (2.14.2-4ubuntu1) ... 635s Selecting previously unselected package libxrender1:arm64. 635s Preparing to unpack .../049-libxrender1_1%3a0.9.10-1.1_arm64.deb ... 635s Unpacking libxrender1:arm64 (1:0.9.10-1.1) ... 635s Selecting previously unselected package libxft2:arm64. 635s Preparing to unpack .../050-libxft2_2.3.6-1_arm64.deb ... 635s Unpacking libxft2:arm64 (2.3.6-1) ... 635s Selecting previously unselected package x11-common. 635s Preparing to unpack .../051-x11-common_1%3a7.7+23ubuntu2_all.deb ... 635s Unpacking x11-common (1:7.7+23ubuntu2) ... 635s Selecting previously unselected package libxss1:arm64. 635s Preparing to unpack .../052-libxss1_1%3a1.2.3-1build2_arm64.deb ... 635s Unpacking libxss1:arm64 (1:1.2.3-1build2) ... 635s Selecting previously unselected package libtk8.6:arm64. 635s Preparing to unpack .../053-libtk8.6_8.6.13-2_arm64.deb ... 635s Unpacking libtk8.6:arm64 (8.6.13-2) ... 635s Selecting previously unselected package tk8.6-blt2.5. 635s Preparing to unpack .../054-tk8.6-blt2.5_2.5.3+dfsg-4.1build2_arm64.deb ... 635s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-4.1build2) ... 635s Selecting previously unselected package blt. 635s Preparing to unpack .../055-blt_2.5.3+dfsg-4.1build2_arm64.deb ... 635s Unpacking blt (2.5.3+dfsg-4.1build2) ... 635s Selecting previously unselected package python3-tk:arm64. 635s Preparing to unpack .../056-python3-tk_3.11.5-1_arm64.deb ... 635s Unpacking python3-tk:arm64 (3.11.5-1) ... 635s Selecting previously unselected package python3-pil.imagetk:arm64. 635s Preparing to unpack .../057-python3-pil.imagetk_10.1.0-1_arm64.deb ... 635s Unpacking python3-pil.imagetk:arm64 (10.1.0-1) ... 635s Selecting previously unselected package python3-contourpy. 635s Preparing to unpack .../058-python3-contourpy_1.0.7-1build2_arm64.deb ... 635s Unpacking python3-contourpy (1.0.7-1build2) ... 635s Selecting previously unselected package python3-cycler. 635s Preparing to unpack .../059-python3-cycler_0.11.0-1_all.deb ... 635s Unpacking python3-cycler (0.11.0-1) ... 635s Selecting previously unselected package python3-brotli. 635s Preparing to unpack .../060-python3-brotli_1.1.0-1_arm64.deb ... 635s Unpacking python3-brotli (1.1.0-1) ... 635s Selecting previously unselected package python3-decorator. 635s Preparing to unpack .../061-python3-decorator_5.1.1-5_all.deb ... 635s Unpacking python3-decorator (5.1.1-5) ... 635s Selecting previously unselected package libisl23:arm64. 635s Preparing to unpack .../062-libisl23_0.26-3_arm64.deb ... 635s Unpacking libisl23:arm64 (0.26-3) ... 635s Selecting previously unselected package libmpc3:arm64. 635s Preparing to unpack .../063-libmpc3_1.3.1-1_arm64.deb ... 635s Unpacking libmpc3:arm64 (1.3.1-1) ... 635s Selecting previously unselected package cpp-13. 635s Preparing to unpack .../064-cpp-13_13.2.0-6ubuntu1_arm64.deb ... 635s Unpacking cpp-13 (13.2.0-6ubuntu1) ... 635s Selecting previously unselected package cpp. 635s Preparing to unpack .../065-cpp_4%3a13.2.0-1ubuntu1_arm64.deb ... 635s Unpacking cpp (4:13.2.0-1ubuntu1) ... 635s Selecting previously unselected package libcc1-0:arm64. 635s Preparing to unpack .../066-libcc1-0_13.2.0-6ubuntu1_arm64.deb ... 635s Unpacking libcc1-0:arm64 (13.2.0-6ubuntu1) ... 635s Selecting previously unselected package libitm1:arm64. 635s Preparing to unpack .../067-libitm1_13.2.0-6ubuntu1_arm64.deb ... 635s Unpacking libitm1:arm64 (13.2.0-6ubuntu1) ... 635s Selecting previously unselected package libatomic1:arm64. 635s Preparing to unpack .../068-libatomic1_13.2.0-6ubuntu1_arm64.deb ... 635s Unpacking libatomic1:arm64 (13.2.0-6ubuntu1) ... 635s Selecting previously unselected package libasan8:arm64. 635s Preparing to unpack .../069-libasan8_13.2.0-6ubuntu1_arm64.deb ... 635s Unpacking libasan8:arm64 (13.2.0-6ubuntu1) ... 635s Selecting previously unselected package liblsan0:arm64. 635s Preparing to unpack .../070-liblsan0_13.2.0-6ubuntu1_arm64.deb ... 635s Unpacking liblsan0:arm64 (13.2.0-6ubuntu1) ... 635s Selecting previously unselected package libtsan2:arm64. 635s Preparing to unpack .../071-libtsan2_13.2.0-6ubuntu1_arm64.deb ... 635s Unpacking libtsan2:arm64 (13.2.0-6ubuntu1) ... 635s Selecting previously unselected package libubsan1:arm64. 635s Preparing to unpack .../072-libubsan1_13.2.0-6ubuntu1_arm64.deb ... 635s Unpacking libubsan1:arm64 (13.2.0-6ubuntu1) ... 636s Selecting previously unselected package libhwasan0:arm64. 636s Preparing to unpack .../073-libhwasan0_13.2.0-6ubuntu1_arm64.deb ... 636s Unpacking libhwasan0:arm64 (13.2.0-6ubuntu1) ... 636s Selecting previously unselected package libgcc-13-dev:arm64. 636s Preparing to unpack .../074-libgcc-13-dev_13.2.0-6ubuntu1_arm64.deb ... 636s Unpacking libgcc-13-dev:arm64 (13.2.0-6ubuntu1) ... 636s Selecting previously unselected package gcc-13. 636s Preparing to unpack .../075-gcc-13_13.2.0-6ubuntu1_arm64.deb ... 636s Unpacking gcc-13 (13.2.0-6ubuntu1) ... 636s Selecting previously unselected package gcc. 636s Preparing to unpack .../076-gcc_4%3a13.2.0-1ubuntu1_arm64.deb ... 636s Unpacking gcc (4:13.2.0-1ubuntu1) ... 636s Selecting previously unselected package libc-dev-bin. 636s Preparing to unpack .../077-libc-dev-bin_2.38-3ubuntu1_arm64.deb ... 636s Unpacking libc-dev-bin (2.38-3ubuntu1) 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Preparing to unpack .../083-libc6-dev_2.38-3ubuntu1_arm64.deb ... 636s Unpacking libc6-dev:arm64 (2.38-3ubuntu1) ... 637s Selecting previously unselected package libstdc++-13-dev:arm64. 637s Preparing to unpack .../084-libstdc++-13-dev_13.2.0-6ubuntu1_arm64.deb ... 637s Unpacking libstdc++-13-dev:arm64 (13.2.0-6ubuntu1) ... 637s Selecting previously unselected package g++-13. 637s Preparing to unpack .../085-g++-13_13.2.0-6ubuntu1_arm64.deb ... 637s Unpacking g++-13 (13.2.0-6ubuntu1) ... 637s Selecting previously unselected package g++. 637s Preparing to unpack .../086-g++_4%3a13.2.0-1ubuntu1_arm64.deb ... 637s Unpacking g++ (4:13.2.0-1ubuntu1) ... 637s Selecting previously unselected package libopenblas0:arm64. 637s Preparing to unpack .../087-libopenblas0_0.3.25+ds-1_arm64.deb ... 637s Unpacking libopenblas0:arm64 (0.3.25+ds-1) ... 637s Selecting previously unselected package libopenblas-pthread-dev:arm64. 637s Preparing to unpack .../088-libopenblas-pthread-dev_0.3.25+ds-1_arm64.deb 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Unpacking libpython3.12-dev:arm64 (3.12.0-5) ... 640s Selecting previously unselected package libpython3-all-dev:arm64. 640s Preparing to unpack .../099-libpython3-all-dev_3.11.4-5ubuntu1_arm64.deb ... 640s Unpacking libpython3-all-dev:arm64 (3.11.4-5ubuntu1) ... 640s Selecting previously unselected package python3.11-dev. 640s Preparing to unpack .../100-python3.11-dev_3.11.6-3_arm64.deb ... 640s Unpacking python3.11-dev (3.11.6-3) ... 640s Selecting previously unselected package libjs-underscore. 640s Preparing to unpack .../101-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 640s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 640s Selecting previously unselected package libjs-sphinxdoc. 640s Preparing to unpack .../102-libjs-sphinxdoc_7.2.6-2_all.deb ... 640s Unpacking libjs-sphinxdoc (7.2.6-2) ... 640s Selecting previously unselected package python3-dev. 640s Preparing to unpack .../103-python3-dev_3.11.4-5ubuntu1_arm64.deb ... 640s Unpacking python3-dev (3.11.4-5ubuntu1) ... 640s Selecting previously unselected package python3.12-dev. 640s Preparing to unpack .../104-python3.12-dev_3.12.0-5_arm64.deb ... 640s Unpacking python3.12-dev (3.12.0-5) ... 640s Selecting previously unselected package python3-all-dev. 640s Preparing to unpack .../105-python3-all-dev_3.11.4-5ubuntu1_arm64.deb ... 640s Unpacking python3-all-dev (3.11.4-5ubuntu1) ... 640s Selecting previously unselected package libxsimd-dev:arm64. 640s Preparing to unpack .../106-libxsimd-dev_10.0.0-3_arm64.deb ... 640s Unpacking libxsimd-dev:arm64 (10.0.0-3) ... 640s Selecting previously unselected package python3-gast. 640s Preparing to unpack .../107-python3-gast_0.5.2-2_all.deb ... 640s Unpacking python3-gast (0.5.2-2) ... 640s Selecting previously unselected package python3-beniget. 640s Preparing to unpack .../108-python3-beniget_0.4.1-3_all.deb ... 640s Unpacking python3-beniget (0.4.1-3) ... 640s Selecting previously unselected package python3-ply. 640s Preparing to unpack .../109-python3-ply_3.11-5_all.deb ... 640s Unpacking python3-ply (3.11-5) ... 640s Selecting previously unselected package python3-pythran. 640s Preparing to unpack .../110-python3-pythran_0.14.0+ds-2_arm64.deb ... 640s Unpacking python3-pythran (0.14.0+ds-2) ... 640s Selecting previously unselected package liblbfgsb0:arm64. 640s Preparing to unpack .../111-liblbfgsb0_3.0+dfsg.4-1_arm64.deb ... 640s Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1) ... 640s Selecting previously unselected package python3-scipy. 640s Preparing to unpack .../112-python3-scipy_1.10.1-5ubuntu1_arm64.deb ... 640s Unpacking python3-scipy (1.10.1-5ubuntu1) ... 641s Selecting previously unselected package python3-ufolib2. 641s Preparing to unpack .../113-python3-ufolib2_0.16.0+dfsg1-1_all.deb ... 641s Unpacking python3-ufolib2 (0.16.0+dfsg1-1) ... 641s Selecting previously unselected package python3-mpmath. 641s Preparing to unpack .../114-python3-mpmath_1.2.1-2_all.deb ... 641s Unpacking python3-mpmath (1.2.1-2) ... 641s Selecting previously unselected package python3-sympy. 641s Preparing to unpack .../115-python3-sympy_1.12-6_all.deb ... 641s Unpacking python3-sympy (1.12-6) ... 641s Selecting previously unselected package python3-appdirs. 641s Preparing to unpack .../116-python3-appdirs_1.4.4-4_all.deb ... 641s Unpacking python3-appdirs (1.4.4-4) ... 641s Selecting previously unselected package python3-fs. 641s Preparing to unpack .../117-python3-fs_2.4.16-2_all.deb ... 641s Unpacking python3-fs (2.4.16-2) ... 641s Selecting previously unselected package python3-lz4. 641s Preparing to unpack .../118-python3-lz4_4.0.2+dfsg-1build2_arm64.deb ... 641s Unpacking python3-lz4 (4.0.2+dfsg-1build2) ... 642s Selecting previously unselected package unicode-data. 642s Preparing to unpack .../119-unicode-data_15.1.0-1_all.deb ... 642s Unpacking unicode-data (15.1.0-1) ... 642s Selecting previously unselected package python3-fonttools. 642s Preparing to unpack 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.../125-python3-pyqt5.sip_12.13.0-1build1_arm64.deb ... 642s Unpacking python3-pyqt5.sip (12.13.0-1build1) ... 642s Selecting previously unselected package libdouble-conversion3:arm64. 642s Preparing to unpack .../126-libdouble-conversion3_3.3.0-1_arm64.deb ... 642s Unpacking libdouble-conversion3:arm64 (3.3.0-1) ... 642s Selecting previously unselected package libpcre2-16-0:arm64. 642s Preparing to unpack .../127-libpcre2-16-0_10.42-4_arm64.deb ... 642s Unpacking libpcre2-16-0:arm64 (10.42-4) ... 642s Selecting previously unselected package libqt5core5a:arm64. 642s Preparing to unpack .../128-libqt5core5a_5.15.10+dfsg-5_arm64.deb ... 642s Unpacking libqt5core5a:arm64 (5.15.10+dfsg-5) ... 642s Selecting previously unselected package libqt5dbus5:arm64. 642s Preparing to unpack .../129-libqt5dbus5_5.15.10+dfsg-5_arm64.deb ... 642s Unpacking libqt5dbus5:arm64 (5.15.10+dfsg-5) ... 642s Selecting previously unselected package fontconfig. 642s Preparing to unpack .../130-fontconfig_2.14.2-4ubuntu1_arm64.deb ... 642s Unpacking fontconfig (2.14.2-4ubuntu1) ... 642s Selecting previously unselected package libglvnd0:arm64. 642s Preparing to unpack .../131-libglvnd0_1.7.0-1_arm64.deb ... 642s Unpacking libglvnd0:arm64 (1.7.0-1) ... 642s Selecting previously unselected package libwayland-server0:arm64. 642s Preparing to unpack .../132-libwayland-server0_1.22.0-2.1_arm64.deb ... 642s Unpacking libwayland-server0:arm64 (1.22.0-2.1) ... 642s Selecting previously unselected package libxcb-randr0:arm64. 642s Preparing to unpack .../133-libxcb-randr0_1.15-1_arm64.deb ... 642s Unpacking libxcb-randr0:arm64 (1.15-1) ... 642s Selecting previously unselected package libgbm1:arm64. 642s Preparing to unpack .../134-libgbm1_23.2.1-1ubuntu4_arm64.deb ... 642s Unpacking libgbm1:arm64 (23.2.1-1ubuntu4) ... 642s Selecting previously unselected package libglapi-mesa:arm64. 642s Preparing to unpack .../135-libglapi-mesa_23.2.1-1ubuntu4_arm64.deb ... 642s Unpacking libglapi-mesa:arm64 (23.2.1-1ubuntu4) ... 643s Selecting previously unselected package libwayland-client0:arm64. 643s Preparing to unpack .../136-libwayland-client0_1.22.0-2.1_arm64.deb ... 643s Unpacking libwayland-client0:arm64 (1.22.0-2.1) ... 643s Selecting previously unselected package libx11-xcb1:arm64. 643s Preparing to unpack .../137-libx11-xcb1_2%3a1.8.7-1_arm64.deb ... 643s Unpacking libx11-xcb1:arm64 (2:1.8.7-1) ... 643s Selecting previously unselected package libxcb-dri2-0:arm64. 643s Preparing to unpack .../138-libxcb-dri2-0_1.15-1_arm64.deb ... 643s Unpacking libxcb-dri2-0:arm64 (1.15-1) ... 643s Selecting previously unselected package libxcb-dri3-0:arm64. 643s Preparing to unpack .../139-libxcb-dri3-0_1.15-1_arm64.deb ... 643s Unpacking libxcb-dri3-0:arm64 (1.15-1) ... 643s Selecting previously unselected package libxcb-present0:arm64. 643s Preparing to unpack .../140-libxcb-present0_1.15-1_arm64.deb ... 643s Unpacking libxcb-present0:arm64 (1.15-1) ... 643s Selecting previously unselected package libxcb-sync1:arm64. 643s Preparing to unpack .../141-libxcb-sync1_1.15-1_arm64.deb ... 643s Unpacking libxcb-sync1:arm64 (1.15-1) ... 643s Selecting previously unselected package libxcb-xfixes0:arm64. 643s Preparing to unpack .../142-libxcb-xfixes0_1.15-1_arm64.deb ... 643s Unpacking libxcb-xfixes0:arm64 (1.15-1) ... 643s Selecting previously unselected package libxshmfence1:arm64. 643s Preparing to unpack .../143-libxshmfence1_1.3-1build4_arm64.deb ... 643s Unpacking libxshmfence1:arm64 (1.3-1build4) ... 643s Selecting previously unselected package libegl-mesa0:arm64. 643s Preparing to unpack .../144-libegl-mesa0_23.2.1-1ubuntu4_arm64.deb ... 643s Unpacking libegl-mesa0:arm64 (23.2.1-1ubuntu4) ... 643s Selecting previously unselected package libegl1:arm64. 643s Preparing to unpack .../145-libegl1_1.7.0-1_arm64.deb ... 643s Unpacking libegl1:arm64 (1.7.0-1) ... 643s Selecting previously unselected package libxcb-glx0:arm64. 643s Preparing to unpack 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libdrm-nouveau2:arm64 (2.4.117-1) ... 643s Selecting previously unselected package libdrm-radeon1:arm64. 643s Preparing to unpack .../152-libdrm-radeon1_2.4.117-1_arm64.deb ... 643s Unpacking libdrm-radeon1:arm64 (2.4.117-1) ... 643s Selecting previously unselected package libllvm15:arm64. 643s Preparing to unpack .../153-libllvm15_1%3a15.0.7-10build1_arm64.deb ... 643s Unpacking libllvm15:arm64 (1:15.0.7-10build1) ... 644s Selecting previously unselected package libsensors-config. 644s Preparing to unpack .../154-libsensors-config_1%3a3.6.0-7ubuntu1_all.deb ... 644s Unpacking libsensors-config (1:3.6.0-7ubuntu1) ... 644s Selecting previously unselected package libsensors5:arm64. 644s Preparing to unpack .../155-libsensors5_1%3a3.6.0-7ubuntu1_arm64.deb ... 644s Unpacking libsensors5:arm64 (1:3.6.0-7ubuntu1) ... 644s Selecting previously unselected package libgl1-mesa-dri:arm64. 644s Preparing to unpack .../156-libgl1-mesa-dri_23.2.1-1ubuntu4_arm64.deb ... 644s Unpacking libgl1-mesa-dri:arm64 (23.2.1-1ubuntu4) ... 644s Selecting previously unselected package libglx-mesa0:arm64. 644s Preparing to unpack .../157-libglx-mesa0_23.2.1-1ubuntu4_arm64.deb ... 644s Unpacking libglx-mesa0:arm64 (23.2.1-1ubuntu4) ... 644s Selecting previously unselected package libglx0:arm64. 644s Preparing to unpack .../158-libglx0_1.7.0-1_arm64.deb ... 644s Unpacking libglx0:arm64 (1.7.0-1) ... 644s Selecting previously unselected package libgl1:arm64. 644s Preparing to unpack .../159-libgl1_1.7.0-1_arm64.deb ... 644s Unpacking libgl1:arm64 (1.7.0-1) ... 644s Selecting previously unselected package libice6:arm64. 644s Preparing to unpack .../160-libice6_2%3a1.0.10-1build2_arm64.deb ... 644s Unpacking libice6:arm64 (2:1.0.10-1build2) ... 644s Selecting previously unselected package libevdev2:arm64. 644s Preparing to unpack .../161-libevdev2_1.13.1+dfsg-1_arm64.deb ... 644s Unpacking libevdev2:arm64 (1.13.1+dfsg-1) ... 644s Selecting previously unselected package libmtdev1:arm64. 644s Preparing to unpack .../162-libmtdev1_1.1.6-1build4_arm64.deb ... 644s Unpacking libmtdev1:arm64 (1.1.6-1build4) ... 644s Selecting previously unselected package libwacom-common. 644s Preparing to unpack .../163-libwacom-common_2.8.0-1_all.deb ... 644s Unpacking libwacom-common (2.8.0-1) ... 644s Selecting previously unselected package libwacom9:arm64. 644s Preparing to unpack .../164-libwacom9_2.8.0-1_arm64.deb ... 644s Unpacking libwacom9:arm64 (2.8.0-1) ... 644s Selecting previously unselected package libinput-bin. 644s Preparing to unpack .../165-libinput-bin_1.23.0-2_arm64.deb ... 644s Unpacking libinput-bin (1.23.0-2) ... 644s Selecting previously unselected package libinput10:arm64. 644s Preparing to unpack .../166-libinput10_1.23.0-2_arm64.deb ... 644s Unpacking libinput10:arm64 (1.23.0-2) ... 644s Selecting previously unselected package libmd4c0:arm64. 644s Preparing to unpack .../167-libmd4c0_0.4.8-1_arm64.deb ... 644s Unpacking libmd4c0:arm64 (0.4.8-1) 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package libxcb-keysyms1:arm64. 645s Preparing to unpack .../173-libxcb-keysyms1_0.4.0-1build3_arm64.deb ... 645s Unpacking libxcb-keysyms1:arm64 (0.4.0-1build3) ... 645s Selecting previously unselected package libxcb-render0:arm64. 645s Preparing to unpack .../174-libxcb-render0_1.15-1_arm64.deb ... 645s Unpacking libxcb-render0:arm64 (1.15-1) ... 645s Selecting previously unselected package libxcb-render-util0:arm64. 645s Preparing to unpack .../175-libxcb-render-util0_0.3.9-1build3_arm64.deb ... 645s Unpacking libxcb-render-util0:arm64 (0.3.9-1build3) ... 645s Selecting previously unselected package libxcb-shape0:arm64. 645s Preparing to unpack .../176-libxcb-shape0_1.15-1_arm64.deb ... 645s Unpacking libxcb-shape0:arm64 (1.15-1) ... 645s Selecting previously unselected package libxcb-xinerama0:arm64. 645s Preparing to unpack .../177-libxcb-xinerama0_1.15-1_arm64.deb ... 645s Unpacking libxcb-xinerama0:arm64 (1.15-1) ... 645s Selecting previously unselected package 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646s Setting up libdouble-conversion3:arm64 (3.3.0-1) ... 646s Setting up libdrm-nouveau2:arm64 (2.4.117-1) ... 646s Setting up libxcb-xfixes0:arm64 (1.15-1) ... 646s Setting up liblerc4:arm64 (4.0.0+ds-2ubuntu2) ... 646s Setting up libpython3.11:arm64 (3.11.6-3) ... 646s Setting up libxcb-xinput0:arm64 (1.15-1) ... 646s Setting up libxrender1:arm64 (1:0.9.10-1.1) ... 646s Setting up python3-lz4 (4.0.2+dfsg-1build2) ... 646s Setting up libxcb-render0:arm64 (1.15-1) ... 646s Setting up libdrm-radeon1:arm64 (2.4.117-1) ... 646s Setting up libglvnd0:arm64 (1.7.0-1) ... 646s Setting up fonts-lyx (2.3.7-1) ... 646s Setting up libxcb-glx0:arm64 (1.15-1) ... 646s Setting up python3-ply (3.11-5) ... 646s Setting up libxcb-keysyms1:arm64 (0.4.0-1build3) ... 646s Setting up libxcb-shape0:arm64 (1.15-1) ... 646s Setting up libpython3.12-minimal:arm64 (3.12.0-5) ... 646s Setting up x11-common (1:7.7+23ubuntu2) ... 647s Setting up libsensors-config (1:3.6.0-7ubuntu1) ... 647s Setting up python3-gast (0.5.2-2) ... 647s Setting up libdeflate0:arm64 (1.18-1) ... 647s Setting up linux-libc-dev:arm64 (6.5.0-9.9) ... 647s Setting up libqhull-r8.0:arm64 (2020.2-6) ... 647s Setting up libxcb-render-util0:arm64 (0.3.9-1build3) ... 647s Setting up libxcb-shm0:arm64 (1.15-1) ... 647s Setting up libxcb-icccm4:arm64 (0.4.1-1.1build2) ... 647s Setting up libgomp1:arm64 (13.2.0-6ubuntu1) ... 647s Setting up libjbig0:arm64 (2.1-6.1ubuntu1) ... 647s Setting up libpcre2-16-0:arm64 (10.42-4) ... 647s Setting up libaec0:arm64 (1.1.2-1) ... 647s Setting up libxcb-util1:arm64 (0.4.0-1build2) ... 647s Setting up libxxf86vm1:arm64 (1:1.1.4-1build3) ... 647s Setting up libxcb-xkb1:arm64 (1.15-1) ... 647s Setting up libxcb-image0:arm64 (0.4.0-2) ... 647s Setting up libxcb-present0:arm64 (1.15-1) ... 647s Setting up unicode-data (15.1.0-1) ... 647s Setting up python3-beniget (0.4.1-3) ... 647s Setting up libxsimd-dev:arm64 (10.0.0-3) ... 647s Setting up python3-decorator (5.1.1-5) ... 647s 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(8.6.13+dfsg-2) ... 648s Setting up fonts-dejavu-core (2.37-8) ... 648s Setting up libsensors5:arm64 (1:3.6.0-7ubuntu1) ... 648s Setting up libjpeg-turbo8:arm64 (2.1.5-2ubuntu1) ... 648s Setting up libqt5core5a:arm64 (5.15.10+dfsg-5) ... 648s Setting up libglapi-mesa:arm64 (23.2.1-1ubuntu4) ... 648s Setting up libgfortran5:arm64 (13.2.0-6ubuntu1) ... 648s Setting up libmtdev1:arm64 (1.1.6-1build4) ... 648s Setting up libwebp7:arm64 (1.3.2-0.3) ... 648s Setting up libubsan1:arm64 (13.2.0-6ubuntu1) ... 648s Setting up libxcb-dri2-0:arm64 (1.15-1) ... 648s Setting up python3-pyqt5.sip (12.13.0-1build1) ... 648s Setting up libnsl-dev:arm64 (1.3.0-3) ... 648s Setting up libxshmfence1:arm64 (1.3-1build4) ... 648s Setting up libhwasan0:arm64 (13.2.0-6ubuntu1) ... 648s Setting up libqt5dbus5:arm64 (5.15.10+dfsg-5) ... 648s Setting up libcrypt-dev:arm64 (1:4.4.36-2) ... 648s Setting up libxcb-randr0:arm64 (1.15-1) ... 648s Setting up libasan8:arm64 (13.2.0-6ubuntu1) ... 648s Setting up libllvm15:arm64 (1:15.0.7-10build1) ... 648s Setting up libxslt1.1:arm64 (1.1.35-1) ... 648s Setting up libmd4c0:arm64 (0.4.8-1) ... 648s Setting up libopenjp2-7:arm64 (2.5.0-2) ... 648s Setting up libharfbuzz0b:arm64 (8.0.1-1) ... 648s Setting up python3-dateutil (2.8.2-3) ... 649s Setting up libxss1:arm64 (1:1.2.3-1build2) ... 649s Setting up libtsan2:arm64 (13.2.0-6ubuntu1) ... 649s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 649s Setting up python3-mpmath (1.2.1-2) ... 649s Setting up libisl23:arm64 (0.26-3) ... 649s Setting up libc-dev-bin (2.38-3ubuntu1) ... 649s Setting up libqt5test5:arm64 (5.15.10+dfsg-5) ... 649s Setting up python-matplotlib-data (3.6.3-1ubuntu3) ... 649s Setting up libwebpmux3:arm64 (1.3.2-0.3) ... 649s Setting up python3-lib2to3 (3.11.5-1) ... 650s Setting up python3-appdirs (1.4.4-4) ... 650s Setting up libevdev2:arm64 (1.13.1+dfsg-1) ... 650s Setting up libcc1-0:arm64 (13.2.0-6ubuntu1) ... 650s Setting up liblsan0:arm64 (13.2.0-6ubuntu1) ... 650s Setting up libsz2:arm64 (1.1.2-1) ... 650s Setting up libitm1:arm64 (13.2.0-6ubuntu1) ... 650s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 650s Setting up libdrm-amdgpu1:arm64 (2.4.117-1) ... 650s Setting up libwacom-common (2.8.0-1) ... 650s Setting up libxkbcommon0:arm64 (1.6.0-1) ... 650s Setting up libwayland-client0:arm64 (1.22.0-2.1) ... 650s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 650s Setting up python3-distutils (3.11.5-1) ... 650s python3.12: can't get files for byte-compilation 650s Setting up python3-sympy (1.12-6) ... 659s Setting up python3.12-minimal (3.12.0-5) ... 660s Setting up libice6:arm64 (2:1.0.10-1build2) ... 660s Setting up liblapack3:arm64 (3.11.0-2build1) ... 660s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 660s Setting up libopenblas0-pthread:arm64 (0.3.25+ds-1) ... 660s update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 660s update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 660s update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/aarch64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-aarch64-linux-gnu) in auto mode 660s Setting up libpython3.12-stdlib:arm64 (3.12.0-5) ... 660s Setting up python3-setuptools (68.1.2-2) ... 660s Setting up cpp-13 (13.2.0-6ubuntu1) ... 660s Setting up libgbm1:arm64 (23.2.1-1ubuntu4) ... 660s Setting up libwacom9:arm64 (2.8.0-1) ... 660s Setting up fontconfig-config (2.14.2-4ubuntu1) ... 661s Setting up libwebpdemux2:arm64 (1.3.2-0.3) ... 661s Setting up python3.12 (3.12.0-5) ... 661s Setting up libgl1-mesa-dri:arm64 (23.2.1-1ubuntu4) ... 661s Setting up libavahi-common3:arm64 (0.8-13ubuntu1) ... 661s Setting up python3-all (3.11.4-5ubuntu1) ... 661s Setting up libqt5network5:arm64 (5.15.10+dfsg-5) ... 661s Setting up libinput-bin (1.23.0-2) ... 661s Setting up python3-fs (2.4.16-2) ... 662s Setting up libqt5sql5:arm64 (5.15.10+dfsg-5) ... 662s Setting up libqt5xml5:arm64 (5.15.10+dfsg-5) ... 662s Setting up libegl-mesa0:arm64 (23.2.1-1ubuntu4) ... 662s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 662s Setting up libraqm0:arm64 (0.10.1-1) ... 662s Setting up libxkbcommon-x11-0:arm64 (1.6.0-1) ... 662s Setting up python3-numpy (1:1.24.2-1ubuntu1) ... 665s Setting up libjs-sphinxdoc (7.2.6-2) ... 665s Setting up libhdf5-103-1:arm64 (1.10.8+repack1-1ubuntu1) ... 665s Setting up libgcc-13-dev:arm64 (13.2.0-6ubuntu1) ... 665s Setting up libopenblas0:arm64 (0.3.25+ds-1) ... 665s Setting up python3-lxml:arm64 (4.9.3-1build1) ... 665s Setting up libtiff6:arm64 (4.5.1+git230720-1ubuntu1) ... 665s Setting up cpp (4:13.2.0-1ubuntu1) ... 665s Setting up libegl1:arm64 (1.7.0-1) ... 665s Setting up libc6-dev:arm64 (2.38-3ubuntu1) ... 665s Setting up python3-contourpy (1.0.7-1build2) ... 665s Setting up libsm6:arm64 (2:1.2.3-1build2) ... 665s Setting up libpython3.12:arm64 (3.12.0-5) ... 665s Setting up libavahi-client3:arm64 (0.8-13ubuntu1) ... 665s Setting up libstdc++-13-dev:arm64 (13.2.0-6ubuntu1) ... 665s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1) ... 665s Setting up libhdf5-hl-100:arm64 (1.10.8+repack1-1ubuntu1) ... 665s Setting up libopenblas-pthread-dev:arm64 (0.3.25+ds-1) ... 666s update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 666s update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 666s update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/libopenblas.so to provide /usr/lib/aarch64-linux-gnu/libopenblas.so (libopenblas.so-aarch64-linux-gnu) in auto mode 666s Setting up libinput10:arm64 (1.23.0-2) ... 666s Setting up libboost1.74-dev:arm64 (1.74.0+ds1-23ubuntu2) ... 666s Setting up libglx-mesa0:arm64 (23.2.1-1ubuntu4) ... 666s Setting up libglx0:arm64 (1.7.0-1) ... 666s Setting up python3-h5py-serial (3.9.0-4build1) ... 666s Setting up python3-pil:arm64 (10.1.0-1) ... 666s Setting up libopenblas-dev:arm64 (0.3.25+ds-1) ... 666s Setting up libgl1:arm64 (1.7.0-1) ... 666s Setting up libexpat1-dev:arm64 (2.5.0-2) ... 666s Setting up python3-h5py (3.9.0-4build1) ... 667s Setting up gcc-13 (13.2.0-6ubuntu1) ... 667s Setting up libcups2:arm64 (2.4.6-0ubuntu3) ... 667s Setting up zlib1g-dev:arm64 (1:1.2.13.dfsg-1ubuntu5) ... 667s Setting up libboost-dev:arm64 (1.74.0.3ubuntu7) ... 667s Setting up g++-13 (13.2.0-6ubuntu1) ... 667s Setting up libpython3.12-dev:arm64 (3.12.0-5) ... 667s Setting up gcc (4:13.2.0-1ubuntu1) ... 667s Setting up libpython3.11-dev:arm64 (3.11.6-3) ... 667s Setting up python3.12-dev (3.12.0-5) ... 667s Setting up g++ (4:13.2.0-1ubuntu1) ... 667s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 667s Setting up libpython3-dev:arm64 (3.11.4-5ubuntu1) ... 667s Setting up python3.11-dev (3.11.6-3) ... 667s Setting up libpython3-all-dev:arm64 (3.11.4-5ubuntu1) ... 667s Setting up python3-dev (3.11.4-5ubuntu1) ... 667s Setting up python3-all-dev (3.11.4-5ubuntu1) ... 667s Setting up python3-pythran (0.14.0+ds-2) ... 667s Setting up python3-scipy (1.10.1-5ubuntu1) ... 672s Setting up python3-fonttools (4.38.0-1build2) ... 672s /usr/lib/python3/dist-packages/fontTools/cffLib/specializer.py:40: SyntaxWarning: invalid escape sequence '\_' 672s """Takes a T2CharString program list and returns list of commands. 673s Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... 673s Processing triggers for sgml-base (1.31) ... 673s Setting up libfontconfig1:arm64 (2.14.2-4ubuntu1) ... 673s Setting up fontconfig (2.14.2-4ubuntu1) ... 675s Regenerating fonts cache... done. 675s Setting up libxft2:arm64 (2.3.6-1) ... 675s Setting up libtk8.6:arm64 (8.6.13-2) ... 676s Processing triggers for libc-bin (2.38-3ubuntu1) ... 676s Setting up libqt5gui5:arm64 (5.15.10+dfsg-5) ... 676s Setting up libqt5widgets5:arm64 (5.15.10+dfsg-5) ... 676s Processing triggers for systemd (253.5-1ubuntu7) ... 676s Processing triggers for man-db (2.12.0-1) ... 676s Setting up libqt5help5:arm64 (5.15.10-5) ... 676s Setting up libqt5printsupport5:arm64 (5.15.10+dfsg-5) ... 676s Processing triggers for udev (253.5-1ubuntu7) ... 677s Setting up tk8.6-blt2.5 (2.5.3+dfsg-4.1build2) ... 677s Setting up libqt5designer5:arm64 (5.15.10-5) ... 677s Setting up blt (2.5.3+dfsg-4.1build2) ... 677s Setting up python3-tk:arm64 (3.11.5-1) ... 677s Setting up python3-pil.imagetk:arm64 (10.1.0-1) ... 677s Setting up python3-pyqt5 (5.15.10+dfsg-1) ... 677s Setting up python3-matplotlib (3.6.3-1ubuntu3) ... 680s Setting up python3-fabio (2023.6.0-3build1) ... 680s Setting up autopkgtest-satdep (0) ... 680s Processing triggers for libc-bin (2.38-3ubuntu1) ... 688s (Reading database ... 102891 files and directories currently installed.) 688s Removing autopkgtest-satdep (0) ... 689s autopkgtest [18:41:15]: test command1: set -efu ; cp bootstrap.py pyproject.toml run_tests.py README.rst "$AUTOPKGTEST_TMP" ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py run_tests.py -v -m --installed ; done 689s autopkgtest [18:41:15]: test command1: [----------------------- 689s Testing with python3.12: 690s WARNING:run_tests:Test fabio 2023.6.0 from /usr/lib/python3/dist-packages/fabio 690s test_iter_abort_iteration (fabio.test.test_fabio_image.TestFabioImage.test_iter_abort_iteration) ... ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestFabioImage.test_iter_abort_iteration 690s testcopy (fabio.test.test_fabio_image.Test50000.testcopy) 690s test the copy statement ... ok 690s INFO:memProf:Time: 0.023s RAM: 6.144 Mb fabio.test.test_fabio_image.Test50000.testcopy 690s testgetmax (fabio.test.test_fabio_image.Test50000.testgetmax) 690s check max ... ok 690s INFO:memProf:Time: 0.003s RAM: 0.656 Mb fabio.test.test_fabio_image.Test50000.testgetmax 690s testgetmean (fabio.test.test_fabio_image.Test50000.testgetmean) 690s check mean ... ok 690s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.test_fabio_image.Test50000.testgetmean 690s testgetmin (fabio.test.test_fabio_image.Test50000.testgetmin) 690s check min ... ok 690s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_fabio_image.Test50000.testgetmin 690s testgetstddev (fabio.test.test_fabio_image.Test50000.testgetstddev) 690s check stddev ... ok 690s INFO:memProf:Time: 0.010s RAM: 8.132 Mb fabio.test.test_fabio_image.Test50000.testgetstddev 690s testRebin (fabio.test.test_fabio_image.TestSlices.testRebin) 690s Test the rebin method ... ok 690s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testRebin 690s testgetmax (fabio.test.test_fabio_image.TestSlices.testgetmax) 690s check max ... ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testgetmax 690s testgetmin (fabio.test.test_fabio_image.TestSlices.testgetmin) 690s check min ... ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testgetmin 690s testintegratearea (fabio.test.test_fabio_image.TestSlices.testintegratearea) 690s check integrations ... ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testintegratearea 690s testFlat (fabio.test.test_fabio_image.TestOpen.testFlat) 690s no compression ... ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testFlat 690s test_badtype (fabio.test.test_fabio_image.TestOpen.test_badtype) ... ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.test_badtype 690s test_pathlib (fabio.test.test_fabio_image.TestOpen.test_pathlib) ... ok 690s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.test_pathlib 690s testbz2 (fabio.test.test_fabio_image.TestOpen.testbz2) 690s bzipped ... ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testbz2 690s testgz (fabio.test.test_fabio_image.TestOpen.testgz) 690s gzipped ... ok 690s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testgz 690s testpil (fabio.test.test_fabio_image.TestPilImage.testpil) ... WARNING:fabio.DEPRECATION:Function toPIL16 is deprecated since fabio version 0.9. Reason: Not maintained. Use 'fabio.utils.pilutils.create_pil_16' instead. 690s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 209, in testpil 690s pim = img.toPIL16() 690s ok 690s INFO:memProf:Time: 0.049s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage.testpil 690s testpil (fabio.test.test_fabio_image.TestPilImage2.testpil) ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py:232: RuntimeWarning: invalid value encountered in cast 690s return (numpy.random.random(shape) * sys.maxsize / 10).astype(typ) 690s 690s ok 690s INFO:memProf:Time: 0.054s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage2.testpil 690s testpil (fabio.test.test_fabio_image.TestPilImage3.testpil) ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py:240: RuntimeWarning: invalid value encountered in cast 690s return ((numpy.random.random(shape) - 0.5) * sys.maxsize / 10).astype(typ) 690s 690s ok 690s INFO:memProf:Time: 0.056s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage3.testpil 690s test_cleanup_pilimage_cache (fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_cleanup_pilimage_cache) ... WARNING:fabio.DEPRECATION:Function pilimage is deprecated. Reason: Setting pilimage not supported. This attrbute is not cached anymore. 690s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 257, in test_cleanup_pilimage_cache 690s image.pilimage = None 690s ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_cleanup_pilimage_cache 690s test_patch_dim (fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_patch_dim) ... WARNING:fabio.DEPRECATION:Function dim2 is deprecated. Reason: dim2 should not be updated. 690s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 249, in test_patch_dim 690s image.dim2, image.dim1 = data.shape 690s WARNING:fabio.DEPRECATION:Function dim1 is deprecated. Reason: dim1 should not be updated. 690s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 249, in test_patch_dim 690s image.dim2, image.dim1 = data.shape 690s ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_patch_dim 690s test_many_cases (fabio.test.test_filenames.TestFilenames.test_many_cases) 690s loop over CASES ... ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_many_cases 690s test_more_cases (fabio.test.test_filenames.TestFilenames.test_more_cases) ... ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_more_cases 690s test_more_cases_jump (fabio.test.test_filenames.TestFilenames.test_more_cases_jump) ... ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_more_cases_jump 690s test_FileNameObject_can_iterate (fabio.test.test_filenames.TestFilenameObjects.test_FileNameObject_can_iterate) 690s Regression test for Fable ... ok 690s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenameObjects.test_FileNameObject_can_iterate 690s test_files_are_being_opened (fabio.test.test_filenames.TestFilenameObjects.test_files_are_being_opened) 690s Regression test for Fable ... ok 690s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenameObjects.test_files_are_being_opened 690s testfirst (fabio.test.test_file_series.TestRandomSeries.testfirst) 690s check first ... ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testfirst 690s testjump (fabio.test.test_file_series.TestRandomSeries.testjump) 690s check jump ... ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testjump 690s testlast (fabio.test.test_file_series.TestRandomSeries.testlast) 690s check first ... ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testlast 690s testfirst (fabio.test.test_file_series.TestEdfNumbered.testfirst) 690s first in series ... ok 690s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testfirst 690s testlast (fabio.test.test_file_series.TestEdfNumbered.testlast) 690s last in series ... ok 690s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testlast 690s testlen (fabio.test.test_file_series.TestEdfNumbered.testlen) 690s check len ... ok 690s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testlen 690s testnext (fabio.test.test_file_series.TestEdfNumbered.testnext) 690s check all in order ... ok 690s INFO:memProf:Time: 0.012s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testnext 690s testnextjump (fabio.test.test_file_series.TestEdfNumbered.testnextjump) 690s check current ... ok 690s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testnextjump 690s testprevious (fabio.test.test_file_series.TestEdfNumbered.testprevious) 690s check all in order ... ok 690s INFO:memProf:Time: 0.012s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testprevious 690s testprevjump (fabio.test.test_file_series.TestEdfNumbered.testprevjump) 690s check current ... ok 690s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testprevjump 690s test_anyframe_frames (fabio.test.test_file_series.TestFileSeries.test_anyframe_frames) ... ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_frames 690s test_anyframe_getframe (fabio.test.test_file_series.TestFileSeries.test_anyframe_getframe) ... ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_getframe 690s test_anyframe_getframes (fabio.test.test_file_series.TestFileSeries.test_anyframe_getframes) ... ok 690s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_getframes 690s test_anyframe_nframes (fabio.test.test_file_series.TestFileSeries.test_anyframe_nframes) ... ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_nframes 690s test_anyframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_anyframe_nofiles) ... ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_nofiles 690s test_filename_generator (fabio.test.test_file_series.TestFileSeries.test_filename_generator) ... ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_filename_generator 690s test_filename_iterator (fabio.test.test_file_series.TestFileSeries.test_filename_iterator) ... ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_filename_iterator 690s test_multiframe_frames (fabio.test.test_file_series.TestFileSeries.test_multiframe_frames) ... ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_frames 690s test_multiframe_getframe (fabio.test.test_file_series.TestFileSeries.test_multiframe_getframe) ... ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_getframe 690s test_multiframe_nframes (fabio.test.test_file_series.TestFileSeries.test_multiframe_nframes) ... ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_nframes 690s test_multiframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_multiframe_nofiles) ... ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_nofiles 690s test_singleframe_frames (fabio.test.test_file_series.TestFileSeries.test_singleframe_frames) ... ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_frames 690s test_singleframe_getframe (fabio.test.test_file_series.TestFileSeries.test_singleframe_getframe) ... ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_getframe 690s test_singleframe_nframes (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes) ... ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes 690s test_singleframe_nframes2 (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes2) ... ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes2 690s test_singleframe_nframes3 (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes3) ... ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes3 690s test_singleframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_singleframe_nofiles) ... ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nofiles 690s test_with_filename_series (fabio.test.test_file_series.TestFileSeries.test_with_filename_series) ... ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_with_filename_series 690s test_with_numbered_file_series (fabio.test.test_file_series.TestFileSeries.test_with_numbered_file_series) ... ok 690s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_with_numbered_file_series 690s test_next1 (fabio.test.test_filename_steps.TestNext.test_next1) ... ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestNext.test_next1 690s test_prev1 (fabio.test.test_filename_steps.TestPrev.test_prev1) ... ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestPrev.test_prev1 690s test_jump1 (fabio.test.test_filename_steps.TestJump.test_jump1) ... ok 690s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestJump.test_jump1 690s testheader (fabio.test.test_header_not_singleton.TestHeaderNotSingleton.testheader) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 691s INFO:fabio.utils.ExternalResources:Image mb_LP_1_001.img.bz2 successfully downloaded. 694s ok 694s INFO:memProf:Time: 4.213s RAM: 50.284 Mb fabio.test.test_header_not_singleton.TestHeaderNotSingleton.testheader 694s testcase (fabio.test.test_open_header.Test1.testcase) 694s check openheader can read edf headers ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675_header_only.edf.bz2') 695s INFO:fabio.utils.ExternalResources:Image F2K_Seb_Lyso0675_header_only.edf.bz2 successfully downloaded. 695s ERROR 695s INFO:memProf:Time: 0.171s RAM: 0.000 Mb fabio.test.test_open_header.Test1.testcase 695s testAdsc (fabio.test.test_open_image.TestOpenDtrek.testAdsc) 695s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 695s ok 695s INFO:memProf:Time: 0.140s RAM: 147.480 Mb fabio.test.test_open_image.TestOpenDtrek.testAdsc 695s testAdscBz2 (fabio.test.test_open_image.TestOpenDtrek.testAdscBz2) 695s openimage opening adsc bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 697s ok 697s INFO:memProf:Time: 1.894s RAM: 1.636 Mb fabio.test.test_open_image.TestOpenDtrek.testAdscBz2 697s testAdscGz (fabio.test.test_open_image.TestOpenDtrek.testAdscGz) 697s openimage opening adsc gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.gz') 697s ERROR 697s INFO:memProf:Time: 0.081s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenDtrek.testAdscGz 697s testBruker (fabio.test.test_open_image.TestOpenBruker.testBruker) 697s openimage opening bruker ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 697s INFO:fabio.utils.ExternalResources:Image Cr8F8140k103.0026.bz2 successfully downloaded. 697s ok 697s INFO:memProf:Time: 0.426s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBruker 697s testBrukerBz2 (fabio.test.test_open_image.TestOpenBruker.testBrukerBz2) 697s openimage opening bruker bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 697s ok 697s INFO:memProf:Time: 0.046s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBrukerBz2 697s testBrukerGz (fabio.test.test_open_image.TestOpenBruker.testBrukerGz) 697s openimage opening bruker gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.gz') 697s ERROR 697s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBrukerGz 697s testEdf (fabio.test.test_open_image.TestOpenEdf.testEdf) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 699s INFO:fabio.utils.ExternalResources:Image F2K_Seb_Lyso0675.edf.bz2 successfully downloaded. 700s ok 700s INFO:memProf:Time: 2.983s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdf 700s testEdfBz2 (fabio.test.test_open_image.TestOpenEdf.testEdfBz2) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 702s ok 702s INFO:memProf:Time: 1.753s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdfBz2 702s testEdfGz (fabio.test.test_open_image.TestOpenEdf.testEdfGz) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.gz') 702s ok 702s INFO:memProf:Time: 0.222s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdfGz 702s testMask (fabio.test.test_open_image.TestOpenMask.testMask) 702s openimage opening fit2d msk ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 702s INFO:fabio.utils.ExternalResources:Image face.msk.bz2 successfully downloaded. 702s ok 702s INFO:memProf:Time: 0.169s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMask 702s testMaskBz2 (fabio.test.test_open_image.TestOpenMask.testMaskBz2) 702s openimage opening fit2d msk bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 702s ok 702s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMaskBz2 702s testMaskGz (fabio.test.test_open_image.TestOpenMask.testMaskGz) 702s openimage opening fit2d msk gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.gz') 702s ERROR 702s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMaskGz 702s testMccd (fabio.test.test_open_image.TestOpenMccd.testMccd) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 703s INFO:fabio.utils.ExternalResources:Image somedata_0001.mccd.bz2 successfully downloaded. 703s ok 703s INFO:memProf:Time: 0.829s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccd 703s testMccdBz2 (fabio.test.test_open_image.TestOpenMccd.testMccdBz2) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 703s ok 703s INFO:memProf:Time: 0.192s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccdBz2 703s testMccdGz (fabio.test.test_open_image.TestOpenMccd.testMccdGz) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.gz') 703s ERROR 703s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccdGz 703s testOxd (fabio.test.test_open_image.TestOpenOxd.testOxd) 703s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 704s INFO:fabio.utils.ExternalResources:Image b191_1_9_1.img.bz2 successfully downloaded. 704s ok 704s INFO:memProf:Time: 0.466s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenOxd.testOxd 704s testOxdUnc (fabio.test.test_open_image.TestOpenOxd.testOxdUnc) 704s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 704s INFO:fabio.utils.ExternalResources:Image b191_1_9_1_uncompressed.img.bz2 successfully downloaded. 705s ok 705s INFO:memProf:Time: 1.700s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenOxd.testOxdUnc 705s testComp (fabio.test.test_compression.TestByteOffset.testComp) ... ok 705s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_compression.TestByteOffset.testComp 705s testSC (fabio.test.test_compression.TestByteOffset.testSC) 705s test that datasets are unchanged after various compression/decompressions ... ok 705s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_compression.TestByteOffset.testSC 706s test_from_time (fabio.test.test_nexus.TestNexus.test_from_time) ... ok 706s INFO:memProf:Time: 0.019s RAM: 0.000 Mb fabio.test.test_nexus.TestNexus.test_from_time 706s test_nexus (fabio.test.test_nexus.TestNexus.test_nexus) 706s Test creation of Nexus files ... ok 706s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.test_nexus.TestNexus.test_nexus 706s testDefaultOption (fabio.test.test_fabio_convert.TestFabioConvert.testDefaultOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -F=msk -o=output 706s INFO:fabio.test.test_fabio_convert:Return code: 0 706s ok 706s INFO:memProf:Time: 0.250s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testDefaultOption 706s testForceOption (fabio.test.test_fabio_convert.TestFabioConvert.testForceOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -f -F=msk -o=output 706s INFO:fabio.test.test_fabio_convert:Return code: 0 706s ok 706s INFO:memProf:Time: 0.223s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testForceOption 706s testFullFormatName (fabio.test.test_fabio_convert.TestFabioConvert.testFullFormatName) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.* -F=numpyimage -o=output 706s INFO:fabio.test.test_fabio_convert:Return code: 0 706s ok 706s INFO:memProf:Time: 0.240s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testFullFormatName 706s testInteractiveOption (fabio.test.test_fabio_convert.TestFabioConvert.testInteractiveOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -n -i -F=msk -o=output 706s INFO:fabio.test.test_fabio_convert:Return code: 0 706s ok 706s INFO:memProf:Time: 0.235s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testInteractiveOption 706s testNoClobberOption (fabio.test.test_fabio_convert.TestFabioConvert.testNoClobberOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -n -F=msk -o=output 707s INFO:fabio.test.test_fabio_convert:Return code: 0 707s ok 707s INFO:memProf:Time: 0.238s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testNoClobberOption 707s testRemoveDestinationOption (fabio.test.test_fabio_convert.TestFabioConvert.testRemoveDestinationOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf --remove-destination -F=msk -o=output 707s INFO:fabio.test.test_fabio_convert:Return code: 0 707s ok 707s INFO:memProf:Time: 0.237s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testRemoveDestinationOption 707s testSingleFile (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFile) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.edf -o=output/03.msk 707s INFO:fabio.test.test_fabio_convert:Return code: 0 707s ok 707s INFO:memProf:Time: 0.235s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFile 707s testSingleFileToDir (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileToDir) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.edf -F=msk -o=output 707s INFO:fabio.test.test_fabio_convert:Return code: 0 707s ok 707s INFO:memProf:Time: 0.233s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileToDir 707s testSingleFileWithWildcardToDir (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileWithWildcardToDir) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.* -F=msk -o=output 708s INFO:fabio.test.test_fabio_convert:Return code: 0 708s ok 708s INFO:memProf:Time: 0.222s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileWithWildcardToDir 708s testUpdateOption (fabio.test.test_fabio_convert.TestFabioConvert.testUpdateOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.12 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf --update -F=msk -o=output 708s INFO:fabio.test.test_fabio_convert:Return code: 0 708s ok 708s INFO:memProf:Time: 0.226s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testUpdateOption 708s test_missing_file (fabio.test.test_failing_files.TestFailingFiles.test_missing_file) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_missing_file 708s test_wrong_dm3 (fabio.test.test_failing_files.TestFailingFiles.test_wrong_dm3) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_dm3 708s test_wrong_edf (fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf 708s test_wrong_edf2 (fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf2) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf2 708s test_wrong_format (fabio.test.test_failing_files.TestFailingFiles.test_wrong_format) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_format 708s test_wrong_msk (fabio.test.test_failing_files.TestFailingFiles.test_wrong_msk) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_msk 708s test_wrong_numpy (fabio.test.test_failing_files.TestFailingFiles.test_wrong_numpy) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_numpy 708s test_annotation (fabio.test.test_formats.TestRegistration.test_annotation) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_annotation 708s test_deprecated_fabioimage_factory (fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory) 708s Check that it is still working ... ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory 708s test_deprecated_fabioimage_factory_missing_format (fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory_missing_format) 708s Check that it is still working ... ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory_missing_format 708s test_fabio_factory (fabio.test.test_formats.TestRegistration.test_fabio_factory) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabio_factory 708s test_fabio_factory_missing_format (fabio.test.test_formats.TestRegistration.test_fabio_factory_missing_format) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabio_factory_missing_format 708s test_fabioformats_factory (fabio.test.test_formats.TestRegistration.test_fabioformats_factory) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabioformats_factory 708s test_fabioformats_factory_missing_format (fabio.test.test_formats.TestRegistration.test_fabioformats_factory_missing_format) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabioformats_factory_missing_format 708s test_function (fabio.test.test_formats.TestRegistration.test_function) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_function 708s test_not_existing (fabio.test.test_formats.TestRegistration.test_not_existing) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_not_existing 708s test_edf_to_tiff (fabio.test.test_image_convert.TestImageConvert.test_edf_to_tiff) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf') 708s INFO:fabio.utils.ExternalResources:Image face.edf.bz2 successfully downloaded. 708s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 708s ok 708s INFO:memProf:Time: 0.191s RAM: 0.000 Mb fabio.test.test_image_convert.TestImageConvert.test_edf_to_tiff 708s test_append (fabio.test.test_tiffio.TestTiffIO.test_append) ... ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_append 708s test_read (fabio.test.test_tiffio.TestTiffIO.test_read) ... INFO:fabio.test.test_tiffio:nRows = 100 708s INFO:fabio.test.test_tiffio:nColumns = 100 708s INFO:fabio.test.test_tiffio:nBits = 16 708s INFO:fabio.test.test_tiffio:compression = False 708s INFO:fabio.test.test_tiffio:compression_type = 1 708s INFO:fabio.test.test_tiffio:imageDescription = Title=1st 708s 708s INFO:fabio.test.test_tiffio:stripOffsets = [168] 708s INFO:fabio.test.test_tiffio:rowsPerStrip = 100 708s INFO:fabio.test.test_tiffio:stripByteCounts = [20000] 708s INFO:fabio.test.test_tiffio:software = PyMca.TiffIO 708s INFO:fabio.test.test_tiffio:date = Unknown Date 708s INFO:fabio.test.test_tiffio:sampleFormat = 1 708s INFO:fabio.test.test_tiffio:photometricInterpretation = 1 708s INFO:fabio.test.test_tiffio:info = {'Title': '1st'} 708s INFO:fabio.test.test_tiffio:data [0, 0:10] = [0 1 2 3 4 5 6 7 8 9] 708s ok 708s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_read 708s test_write (fabio.test.test_tiffio.TestTiffIO.test_write) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_write 708s test_single_frame_iterator (fabio.test.test_frames.TestFabioImage.test_single_frame_iterator) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestFabioImage.test_single_frame_iterator 708s test_content (fabio.test.test_frames.TestVirtualEdf.test_content) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_content 708s test_frames_abort_iteration (fabio.test.test_frames.TestVirtualEdf.test_frames_abort_iteration) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_abort_iteration 708s test_frames_full_iteration (fabio.test.test_frames.TestVirtualEdf.test_frames_full_iteration) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_full_iteration 708s test_frames_random_access (fabio.test.test_frames.TestVirtualEdf.test_frames_random_access) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_random_access 708s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 708s INFO:fabio.utils.ExternalResources:Image multiframes.edf.bz2 successfully downloaded. 708s test_content (fabio.test.test_frames.TestEdf.test_content) ... ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_content 708s test_frames_abort_iteration (fabio.test.test_frames.TestEdf.test_frames_abort_iteration) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_abort_iteration 708s test_frames_full_iteration (fabio.test.test_frames.TestEdf.test_frames_full_iteration) ... ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_full_iteration 708s test_frames_random_access (fabio.test.test_frames.TestEdf.test_frames_random_access) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_random_access 708s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.tif.bz2') 708s INFO:fabio.utils.ExternalResources:Image multiframes.tif.bz2 successfully downloaded. 708s test_content (fabio.test.test_frames.TestTiff.test_content) ... ok 708s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_content 708s test_frames_abort_iteration (fabio.test.test_frames.TestTiff.test_frames_abort_iteration) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_abort_iteration 708s test_frames_full_iteration (fabio.test.test_frames.TestTiff.test_frames_full_iteration) ... ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_full_iteration 708s test_frames_random_access (fabio.test.test_frames.TestTiff.test_frames_random_access) ... ok 708s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_random_access 708s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.tif.bz2') 708s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 708s test_frames_abort_iteration (fabio.test.test_frames.TestFileSeries.test_frames_abort_iteration) ... ok 708s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_abort_iteration 708s test_frames_full_iteration (fabio.test.test_frames.TestFileSeries.test_frames_full_iteration) ... ok 708s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_full_iteration 708s test_frames_random_access (fabio.test.test_frames.TestFileSeries.test_frames_random_access) ... ok 708s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_random_access 708s test_open (fabio.test.test_fabio.TestFabio.test_open) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 708s ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open 708s test_open_bytesio (fabio.test.test_fabio.TestFabio.test_open_bytesio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 708s ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_bytesio 708s test_open_fabio_bytesio (fabio.test.test_fabio.TestFabio.test_open_fabio_bytesio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 708s ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_fabio_bytesio 708s test_open_series (fabio.test.test_fabio.TestFabio.test_open_series) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 708s ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series 708s test_open_series_first_filename (fabio.test.test_fabio.TestFabio.test_open_series_first_filename) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 708s ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series_first_filename 708s test_open_series_with (fabio.test.test_fabio.TestFabio.test_open_series_with) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 708s ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series_with 708s test_open_with (fabio.test.test_fabio.TestFabio.test_open_with) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 708s ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_with 708s test_getstats (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_getstats) 708s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 708s ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_getstats 708s test_headers (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 708s ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_headers 708s test_read (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_read) 708s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 708s ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_read 708s test_getstats (fabio.test.codecs.test_edfimage.TestBzipEdf.test_getstats) 708s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 708s ok 708s INFO:memProf:Time: 0.060s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_getstats 708s test_headers (fabio.test.codecs.test_edfimage.TestBzipEdf.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 708s ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_headers 708s test_read (fabio.test.codecs.test_edfimage.TestBzipEdf.test_read) 708s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 708s ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_read 708s test_getstats (fabio.test.codecs.test_edfimage.TestGzipEdf.test_getstats) 708s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 708s ok 708s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_getstats 708s test_headers (fabio.test.codecs.test_edfimage.TestGzipEdf.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 708s ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_headers 708s test_read (fabio.test.codecs.test_edfimage.TestGzipEdf.test_read) 708s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/im0000.edf (frame 0) misses mandatory keys: HEADERID SIZE 708s ok 708s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_read 708s test_read (fabio.test.codecs.test_edfimage.TestEdfs.test_read) 708s check we can read these images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 708s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('id13_badPadding.edf.bz2') 709s INFO:fabio.utils.ExternalResources:Image id13_badPadding.edf.bz2 successfully downloaded. 710s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf Mean: exp=1504.29, obt=1504.291387796402 710s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf StdDev: exp=217.61, obt=217.60628547694915 711s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.bz2 Mean: exp=1504.29, obt=1504.291387796402 711s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.bz2 StdDev: exp=217.61, obt=217.60628547694915 711s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.gz Mean: exp=1504.29, obt=1504.291387796402 711s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.gz StdDev: exp=217.61, obt=217.60628547694915 711s INFO:fabio.test.codecs.test_edfimage:id13_badPadding.edf Mean: exp=275.62, obt=275.6165885925293 711s INFO:fabio.test.codecs.test_edfimage:id13_badPadding.edf StdDev: exp=583.44, obt=583.4356660155632 711s ok 711s INFO:memProf:Time: 2.638s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfs.test_read 711s test_rebin (fabio.test.codecs.test_edfimage.TestEdfs.test_rebin) 711s test the rebin of edfdata ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 711s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('id13_badPadding.edf.bz2') 711s ok 711s INFO:memProf:Time: 0.013s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfs.test_rebin 711s test_read (fabio.test.codecs.test_edfimage.TestEdfCompressedData.test_read) 711s check we can read these images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfGzip_U16.edf.bz2') 713s INFO:fabio.utils.ExternalResources:Image edfGzip_U16.edf.bz2 successfully downloaded. 713s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfCompressed_U16.edf.bz2') 714s INFO:fabio.utils.ExternalResources:Image edfCompressed_U16.edf.bz2 successfully downloaded. 715s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfUncompressed_U16.edf.bz2') 716s INFO:fabio.utils.ExternalResources:Image edfUncompressed_U16.edf.bz2 successfully downloaded. 718s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 718s INFO:fabio.edfimage:Data stream is padded : 8389062 > required 8388608 bytes 718s ok 718s INFO:memProf:Time: 7.058s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfCompressedData.test_read 718s test_getFrame_mono (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_mono) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 719s INFO:fabio.utils.ExternalResources:Image MultiFrame.edf.bz2 successfully downloaded. 721s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 721s INFO:fabio.utils.ExternalResources:Image MultiFrame-Frame0.edf.bz2 successfully downloaded. 723s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 723s INFO:fabio.utils.ExternalResources:Image MultiFrame-Frame1.edf.bz2 successfully downloaded. 724s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 724s ok 724s INFO:memProf:Time: 5.940s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_mono 724s test_getFrame_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 724s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 724s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 724s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 724s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 724s ok 724s INFO:memProf:Time: 0.008s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_multi 724s test_next_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_next_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 724s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 724s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 724s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 724s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 724s ok 724s INFO:memProf:Time: 0.008s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_next_multi 724s test_openimage_multiframes (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_openimage_multiframes) 724s test if openimage can directly read first or second frame of a multi-frame ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 724s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 724s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 724s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 724s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 724s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 724s ok 724s INFO:memProf:Time: 0.012s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_openimage_multiframes 724s test_previous_mono (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_mono) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 724s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 724s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 724s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 724s ok 724s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_mono 724s test_previous_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 724s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 724s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 724s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 724s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 724s ok 724s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_multi 724s test_fastread (fabio.test.codecs.test_edfimage.TestEdfFastRead.test_fastread) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 724s ok 724s INFO:memProf:Time: 0.330s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfFastRead.test_fastread 724s testBzip2 (fabio.test.codecs.test_edfimage.TestEdfWrite.testBzip2) ... ok 724s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testBzip2 724s testFlat (fabio.test.codecs.test_edfimage.TestEdfWrite.testFlat) ... ok 724s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testFlat 724s testGzip (fabio.test.codecs.test_edfimage.TestEdfWrite.testGzip) ... ok 724s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testGzip 724s test_bug_27 (fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_27) 725s import fabio ... ok 725s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_27 725s test_bug_459 (fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_459) ... ok 725s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_459 725s test_remove_metadata_header (fabio.test.codecs.test_edfimage.TestEdfRegression.test_remove_metadata_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf.bz2') 725s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 725s ok 725s INFO:memProf:Time: 0.020s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_remove_metadata_header 725s test_base (fabio.test.codecs.test_edfimage.TestBadFiles.test_base) ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_base.edf (frame 0) misses mandatory keys: HEADERID SIZE 725s INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_base.edf (frame 1) misses mandatory keys: HEADERID SIZE 725s ok 725s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_base 725s test_empty (fabio.test.codecs.test_edfimage.TestBadFiles.test_empty) ... ok 725s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_empty 725s test_full_frame_plus_half_header (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header) ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header.edf (frame 0) misses mandatory keys: HEADERID SIZE 725s ok 725s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header 725s test_full_frame_plus_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data.edf (frame 0) misses mandatory keys: HEADERID SIZE 725s INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data.edf (frame 1) misses mandatory keys: HEADERID SIZE 725s ERROR:fabio.edfimage:Data stream is incomplete: 131072 < expected 262144 bytes 725s ok 725s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data 725s test_full_frame_plus_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data.edf (frame 0) misses mandatory keys: HEADERID SIZE 725s INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data.edf (frame 1) misses mandatory keys: HEADERID SIZE 725s ok 725s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data 725s test_half_header (fabio.test.codecs.test_edfimage.TestBadFiles.test_half_header) ... ok 725s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_half_header 725s test_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data.edf (frame 0) misses mandatory keys: HEADERID SIZE 725s ERROR:fabio.edfimage:Data stream is incomplete: 131072 < expected 262144 bytes 725s ok 725s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data 725s test_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data.edf (frame 0) misses mandatory keys: HEADERID SIZE 725s ok 725s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data 725s test_wrong_magic (fabio.test.codecs.test_edfimage.TestBadFiles.test_wrong_magic) ... ok 725s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_wrong_magic 725s test_base (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base) ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 725s INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base.edf.gz (frame 1) misses mandatory keys: HEADERID SIZE 725s ok 725s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base 725s test_empty (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_empty) ... ok 725s INFO:memProf:Time: 0.011s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_empty 725s test_full_frame_plus_half_header (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header) ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 725s ok 725s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header 725s test_full_frame_plus_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 725s INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data.edf.gz (frame 1) misses mandatory keys: HEADERID SIZE 725s ok 725s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data 725s test_full_frame_plus_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 725s INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data.edf.gz (frame 1) misses mandatory keys: HEADERID SIZE 725s ok 725s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data 725s test_half_header (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_half_header) ... ok 725s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_half_header 725s test_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 725s ok 725s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data 725s test_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_l38lfv6s_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data.edf.gz (frame 0) misses mandatory keys: HEADERID SIZE 725s ok 725s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data 725s test_wrong_magic (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_wrong_magic) ... ok 725s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_wrong_magic 725s test_multi_frame (fabio.test.codecs.test_edfimage.TestEdfIterator.test_multi_frame) 725s Test iterator on a multi-frame EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 725s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 725s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 725s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 725s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 725s ok 725s INFO:memProf:Time: 0.891s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfIterator.test_multi_frame 725s test_single_frame (fabio.test.codecs.test_edfimage.TestEdfIterator.test_single_frame) 725s Test iterator on a single frame EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfCompressed_U16.edf') 726s ok 726s INFO:memProf:Time: 0.418s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfIterator.test_single_frame 726s test_all_images (fabio.test.codecs.test_edfimage.TestSphere2SaxsSamples.test_all_images) ... INFO:fabio.utils.ExternalResources:Image sphere2saxs_output.tar.bz2 successfully downloaded. 726s WARNING:py.warnings:/usr/lib/python3.12/tarfile.py:2220: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 726s warnings.warn( 726s 726s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 726s INFO:fabio.edfimage:Data stream is padded : 80484 > required 80000 bytes 726s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 726s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 726s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 726s ok 726s INFO:memProf:Time: 0.510s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestSphere2SaxsSamples.test_all_images 726s testNonAsciiHeader (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testNonAsciiHeader) 726s Non-ascii characters are skipped. ... WARNING:fabio.edfimage:Non ASCII in key-value: Drop b'mykey' = b'\xc3\xa9yvalue' 726s ok 726s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testNonAsciiHeader 726s testReadBadPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadBadPadding) 726s Some old data were found with headers padded with 0xcd (issue #373) ... ok 726s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadBadPadding 726s testReadGoodPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadGoodPadding) ... ok 726s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadGoodPadding 726s testReadZeroPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadZeroPadding) ... ok 726s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadZeroPadding 726s test_edf6_single_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edf6_single_raw_bf_gblk_gz) 727s Test reading gzipped data files linking to an external binary data file. ... INFO:fabio.utils.ExternalResources:Image ehf_images2.tar.bz2 successfully downloaded. 727s WARNING:py.warnings:/usr/lib/python3.12/tarfile.py:2220: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 727s warnings.warn( 727s 727s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 727s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 727s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 727s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 727s ok 727s INFO:memProf:Time: 0.878s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edf6_single_raw_bf_gblk_gz 727s test_edfblocktypes (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfblocktypes) 727s Test reading (gzipped) extended edf multi frame data files with and without a general block ... INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 727s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 727s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 727s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 727s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 727s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 727s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 727s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 727s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 727s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 727s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 727s INFO:fabio.edfimage:Data stream is padded : 2875 > required 2400 bytes 727s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 727s INFO:fabio.edfimage:Data stream is padded : 2874 > required 2400 bytes 727s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 727s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 727s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 727s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 727s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 727s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 727s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 727s INFO:fabio.edfimage:Data stream is padded : 2875 > required 2400 bytes 727s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 727s INFO:fabio.edfimage:Data stream is padded : 2874 > required 2400 bytes 727s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 727s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 727s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 727s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 727s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 727s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 727s ok 727s INFO:memProf:Time: 0.230s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfblocktypes 727s test_edfmulti_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk) 728s Reading an uncompressed edf-multi-frame-file with references to data ... WARNING:py.warnings:/usr/lib/python3.12/tarfile.py:2220: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 728s warnings.warn( 728s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 728s ok 728s INFO:memProf:Time: 0.259s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk 728s test_edfmulti_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk_gz) 728s Test reading the files of the test test_edfmulti_raw_bf_gblk after ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 728s ok 728s INFO:memProf:Time: 0.272s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk_gz 728s test_edfmulti_raw_dark_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_dark_raw_bf_gblk) 728s Linking data of several frames to different parts of a single external ... INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 728s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 728s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 728s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 728s ok 728s INFO:memProf:Time: 0.162s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_dark_raw_bf_gblk 728s test_edfsingle_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk) 728s Reading an uncompressed edf-single-frame-file with references to data ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 728s ok 728s INFO:memProf:Time: 0.152s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk 728s test_edfsingle_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk_gz) 728s Test reading gzipped data files linking to an external binary data file. ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 728s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 728s ok 728s INFO:memProf:Time: 0.153s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk_gz 728s test_pitfalls (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_pitfalls) 729s multi5+headerblob_edf1.edf.gz ... INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 729s ok 729s INFO:memProf:Time: 0.186s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_pitfalls 729s test_special (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_special) 729s 09_special/face_ok.edf.gz ... INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_ok.edf.gz (frame 0) misses mandatory keys: SIZE 729s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_ok.edf.gz (frame 0) misses mandatory keys: SIZE 729s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary1.edf.gz (frame 0) misses mandatory keys: SIZE 729s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary1.edf.gz (frame 0) misses mandatory keys: SIZE 729s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary2.edf.gz (frame 0) misses mandatory keys: SIZE 729s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary2.edf.gz (frame 0) misses mandatory keys: SIZE 729s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary3.edf.gz (frame 0) misses mandatory keys: SIZE 729s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary3.edf.gz (frame 0) misses mandatory keys: SIZE 729s ok 729s INFO:memProf:Time: 0.151s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_special 729s test_bug_388 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_388) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 729s INFO:fabio.utils.ExternalResources:Image run2_1_00148.edf.bz2 successfully downloaded. 754s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 755s INFO:fabio.utils.ExternalResources:Image run2_1_00148.cbf.bz2 successfully downloaded. 756s ok 756s INFO:memProf:Time: 27.026s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_388 756s test_bug_408 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_408) 756s Bug when reading files generated by XDS ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 756s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 756s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XDS.cbf.bz2') 756s INFO:fabio.utils.ExternalResources:Image XDS.cbf.bz2 successfully downloaded. 757s ok 757s INFO:memProf:Time: 1.117s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_408 757s test_bug_528 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_528) 757s Bug when writing/reading small files ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 757s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 757s ok 757s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_528 757s test_byte_offset (fabio.test.codecs.test_cbfimage.TestCbfReader.test_byte_offset) 757s check byte offset algorithm ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 757s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 757s INFO:fabio.test.codecs.test_cbfimage:Timing for Numpy method : 0.189s 757s INFO:fabio.test.codecs.test_cbfimage:Timing for Cython method : 0.015s, max delta= 0 757s ok 757s INFO:memProf:Time: 0.295s RAM: 15.312 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_byte_offset 757s test_cif (fabio.test.codecs.test_cbfimage.TestCbfReader.test_cif) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 757s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 757s ok 757s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_cif 757s test_consitency_convert (fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_convert) 757s Test if an image can be read and saved and the results are "similar" ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 757s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 757s ok 757s INFO:memProf:Time: 0.097s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_convert 757s test_consitency_manual (fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_manual) 757s Test if an image can be read and saved and the results are "similar" ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 757s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 757s ok 757s INFO:memProf:Time: 0.099s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_manual 757s test_read (fabio.test.codecs.test_cbfimage.TestCbfReader.test_read) 757s check whole reader ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 757s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 757s INFO:fabio.test.codecs.test_cbfimage:Reading CBF took 0.028s whereas the same EDF took 0.000s 757s ok 757s INFO:memProf:Time: 0.050s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_read 757s test_unicode (fabio.test.codecs.test_cbfimage.TestCbfReader.test_unicode) 757s Test if an image can be read and saved to an unicode named ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 757s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 758s ok 758s INFO:memProf:Time: 0.100s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_unicode 758s test_write (fabio.test.codecs.test_cbfimage.TestCbfReader.test_write) 758s Rest writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 758s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 758s ok 758s INFO:memProf:Time: 0.099s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_write 758s testsame (fabio.test.codecs.test_dtrekimage.TestMatch.testsame) 758s test ADSC image match to EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 758s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.edf.bz2') 759s INFO:fabio.utils.ExternalResources:Image mb_LP_1_001.edf.bz2 successfully downloaded. 792s ok 792s INFO:memProf:Time: 34.417s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestMatch.testsame 792s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 792s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('HSA_1_5mg_C1_0004.img.bz2') 793s INFO:fabio.utils.ExternalResources:Image HSA_1_5mg_C1_0004.img.bz2 successfully downloaded. 794s test_read (fabio.test.codecs.test_dtrekimage.TestRealSamples.test_read) 795s check we can read flat ADSC images ... ok 795s INFO:memProf:Time: 1.120s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestRealSamples.test_read 795s test_write_and_read (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read) ... WARNING:fabio.dtrekimage:Data type uint64 unsupported. Store it as uint32. 795s WARNING:fabio.dtrekimage:Data type int64 unsupported. Store it as int32. 795s WARNING:fabio.dtrekimage:Data type float16 unsupported. Store it as float32. 795s ok 795s INFO:memProf:Time: 0.020s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read 795s test_write_and_read_cube (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_cube) ... ok 795s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_cube 795s test_write_and_read_empty (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_empty) ... ok 795s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_empty 795s test_getmatch (fabio.test.codecs.test_fit2dmaskimage.TestFaceMask.test_getmatch) 795s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 795s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf.bz2') 795s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 795s ok 795s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestFaceMask.test_getmatch 795s test_getmatch (fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_getmatch) 795s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.msk.bz2') 795s INFO:fabio.utils.ExternalResources:Image fit2d_click.msk.bz2 successfully downloaded. 795s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.edf.bz2') 795s INFO:fabio.utils.ExternalResources:Image fit2d_click.edf.bz2 successfully downloaded. 795s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/fit2d_click.edf (frame 0) misses mandatory keys: SIZE 795s ok 795s INFO:memProf:Time: 0.408s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_getmatch 795s test_read (fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_read) 795s Check it reads a mask OK ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.msk.bz2') 795s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.edf.bz2') 795s ok 795s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_read 795s testBzip2 (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testBzip2) ... ok 795s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testBzip2 795s testFlat (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testFlat) ... ok 795s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testFlat 795s testGzip (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testGzip) ... ok 795s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testGzip 795s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.spr.bz2') 796s INFO:fabio.utils.ExternalResources:Image example.spr.bz2 successfully downloaded. 798s test_read (fabio.test.codecs.test_fit2dspreadsheetimage.TestRealSamples.test_read) 800s check we can read flat ADSC images ... ok 800s INFO:memProf:Time: 2.672s RAM: 0.000 Mb fabio.test.codecs.test_fit2dspreadsheetimage.TestRealSamples.test_read 800s test_read (fabio.test.codecs.test_geimage.TestGE.test_read) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529.bz2') 801s INFO:fabio.utils.ExternalResources:Image GE_aSI_detector_image_1529.bz2 successfully downloaded. 804s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529.gz') 804s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529') 806s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_image_1frame_intact_header.ge') 807s INFO:fabio.utils.ExternalResources:Image GE_image_1frame_intact_header.ge.bz2 successfully downloaded. 809s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_image_1frame_blanked_header.ge') 810s INFO:fabio.utils.ExternalResources:Image GE_image_1frame_blanked_header.ge.bz2 successfully downloaded. 812s 812s test_read (fabio.test.codecs.test_geimage.TestGE.test_read) (name='GE_aSI_detector_image_1529.gz') ... ERROR 812s INFO:memProf:Time: 11.374s RAM: 0.000 Mb fabio.test.codecs.test_geimage.TestGE.test_read 812s test_aux (fabio.test.codecs.test_mar345image.TestMar345.test_aux) 812s test auxillary functions ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 813s INFO:fabio.utils.ExternalResources:Image example.mar2300.bz2 successfully downloaded. 813s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 815s INFO:fabio.utils.ExternalResources:Image Fe3O4_023_101.mar2560.bz2 successfully downloaded. 815s ok 815s INFO:memProf:Time: 3.369s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_aux 815s test_byteswap_write (fabio.test.codecs.test_mar345image.TestMar345.test_byteswap_write) 815s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 815s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 819s ok 819s INFO:memProf:Time: 4.196s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_byteswap_write 819s test_memoryleak (fabio.test.codecs.test_mar345image.TestMar345.test_memoryleak) 819s This test takes a lot of time, so only in debug mode. ... skipped 'very slow test' 819s INFO:memProf:Time: 4.196s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_memoryleak 819s test_read (fabio.test.codecs.test_mar345image.TestMar345.test_read) 819s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 819s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 819s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300') 820s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 820s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.gz') 820s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560') 821s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 821s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.gz') 821s ok 821s INFO:memProf:Time: 2.068s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_read 821s test_write (fabio.test.codecs.test_mar345image.TestMar345.test_write) 821s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 821s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 825s ok 825s INFO:memProf:Time: 4.138s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_write 825s test_read (fabio.test.codecs.test_brukerimage.TestBruker.test_read) 825s see if we can read the test image ... ok 825s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBruker.test_read 825s test_read (fabio.test.codecs.test_brukerimage.TestBzipBruker.test_read) 825s see if we can read the test image ... ok 825s INFO:memProf:Time: 0.032s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBzipBruker.test_read 825s test_read (fabio.test.codecs.test_brukerimage.TestGzipBruker.test_read) 825s see if we can read the test image ... ok 825s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestGzipBruker.test_read 825s test_read (fabio.test.codecs.test_brukerimage.TestRealImg.test_read) 825s check we can read bruker images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 825s ok 825s INFO:memProf:Time: 0.023s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestRealImg.test_read 825s test_write (fabio.test.codecs.test_brukerimage.TestRealImg.test_write) 825s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 826s ok 826s INFO:memProf:Time: 0.135s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestRealImg.test_write 826s test_linear (fabio.test.codecs.test_brukerimage.TestBrukerLinear.test_linear) 826s test for self consistency of random data read/write ... WARNING:fabio.brukerimage:performing correction with slope=5.960441029627385e-08, offset=4.5975997e-07 (LINEAR=5.960441029627385e-08 4.5975997e-07) 826s ok 826s INFO:memProf:Time: 0.008s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBrukerLinear.test_linear 826s test_conversion (fabio.test.codecs.test_bruker100image.TestBruker100.test_conversion) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 826s INFO:fabio.utils.ExternalResources:Image NaCl_10_01_0009.npy.bz2 successfully downloaded. 827s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 828s INFO:fabio.utils.ExternalResources:Image NaCl_10_01_0009.sfrm.bz2 successfully downloaded. 828s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('testcbf.cbf.bz2') 828s INFO:fabio.utils.ExternalResources:Image testcbf.cbf.bz2 successfully downloaded. 828s ok 828s INFO:memProf:Time: 2.498s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_conversion 828s test_read (fabio.test.codecs.test_bruker100image.TestBruker100.test_read) 828s check we can read bruker100 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 828s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 828s ERROR 828s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_read 828s test_same (fabio.test.codecs.test_bruker100image.TestBruker100.test_same) 828s check we can read bruker100 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 828s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 828s ERROR 828s INFO:memProf:Time: 0.053s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_same 828s test_split_merge (fabio.test.codecs.test_bruker100image.TestBruker100.test_split_merge) 828s Pretty challanging random example ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 828s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 828s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (65165,) overflow1 (100,) overflow2: (94,) 828s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (1641,) overflow1 (155,) overflow2: (94,) 828s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (0,) overflow1 (1659,) overflow2: (1598,) 828s ok 828s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_split_merge 828s test_write (fabio.test.codecs.test_bruker100image.TestBruker100.test_write) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 828s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 828s ok 828s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_write 828s test_read (fabio.test.codecs.test_mccdimage.TestFlatMccds.test_read) 828s check we can read MarCCD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('corkcont2_H_0089.mccd.bz2') 829s INFO:fabio.utils.ExternalResources:Image corkcont2_H_0089.mccd.bz2 successfully downloaded. 831s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 831s ERROR 831s INFO:memProf:Time: 3.013s RAM: 0.000 Mb fabio.test.codecs.test_mccdimage.TestFlatMccds.test_read 831s test_read_openimage (fabio.test.codecs.test_mccdimage.TestNormalTiffOK.test_read_openimage) ... ok 831s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_mccdimage.TestNormalTiffOK.test_read_openimage 831s test_read (fabio.test.codecs.test_oxdimage.TestOxd.test_read) 831s Test reading of compressed OXD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 831s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 831s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('100nmfilmonglass_1_1.img.bz2') 832s INFO:fabio.utils.ExternalResources:Image 100nmfilmonglass_1_1.img.bz2 successfully downloaded. 832s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus300k.rod_img.bz2') 832s INFO:fabio.utils.ExternalResources:Image pilatus300k.rod_img.bz2 successfully downloaded. 834s INFO:fabio.OXDimage:Compressed with the TY5 compression 834s INFO:fabio.OXDimage:TY5 decompression is slow for now 836s INFO:fabio.OXDimage:TY5: Exception: 16bits: 2844, 32bits: 0 836s ok 836s INFO:memProf:Time: 4.777s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxd.test_read 836s test_write (fabio.test.codecs.test_oxdimage.TestOxd.test_write) 836s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 836s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 836s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('100nmfilmonglass_1_1.img.bz2') 836s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus300k.rod_img.bz2') 836s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 836s INFO:fabio.OXDimage:Compressed with the TY5 compression 836s INFO:fabio.OXDimage:TY5 decompression is slow for now 838s INFO:fabio.OXDimage:TY5: Exception: 16bits: 2844, 32bits: 0 838s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 838s INFO:fabio.test.codecs.test_oxdimage:Skip write test for now 838s ok 838s INFO:memProf:Time: 2.455s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxd.test_write 838s test_same (fabio.test.codecs.test_oxdimage.TestOxdSame.test_same) 838s test if images are actually the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 838s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 838s ok 838s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxdSame.test_same 838s test_same (fabio.test.codecs.test_oxdimage.TestOxdBig.test_same) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('d80_60s.img.bz2') 839s INFO:fabio.utils.ExternalResources:Image d80_60s.img.bz2 successfully downloaded. 844s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('d80_60s.edf.bz2') 846s INFO:fabio.utils.ExternalResources:Image d80_60s.edf.bz2 successfully downloaded. 850s WARNING:fabio.edfimage:Unknown compression scheme TY1 850s ok 850s INFO:memProf:Time: 11.743s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxdBig.test_same 850s test_convert (fabio.test.codecs.test_oxdimage.TestConvert.test_convert) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 850s WARNING:fabio.OXDimage:Enforce TY1 compression 850s ok 850s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestConvert.test_convert 850s test_read (fabio.test.codecs.test_kcdimage.TestKcd.test_read) 850s check we can read kcd images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.kcd.bz2') 851s INFO:fabio.utils.ExternalResources:Image i01f0001.kcd.bz2 successfully downloaded. 852s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.edf.bz2') 852s INFO:fabio.utils.ExternalResources:Image i01f0001.edf.bz2 successfully downloaded. 855s WARNING:fabio.kcdimage:seeking from end is not implemeneted for file /tmp/fabio_testdata_ubuntu/i01f0001.kcd.gz 855s ERROR:fabio.test.codecs.test_kcdimage:unable to read: /tmp/fabio_testdata_ubuntu/i01f0001.kcd.gz 855s ERROR 855s INFO:memProf:Time: 4.879s RAM: 0.000 Mb fabio.test.codecs.test_kcdimage.TestKcd.test_read 855s test_same (fabio.test.codecs.test_kcdimage.TestKcd.test_same) 855s see if we can read kcd images and if they are the same as the EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.kcd.bz2') 855s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.edf.bz2') 855s ok 855s INFO:memProf:Time: 0.292s RAM: 0.000 Mb fabio.test.codecs.test_kcdimage.TestKcd.test_same 855s test_bug502 (fabio.test.codecs.test_tifimage.TestTif.test_bug502) 855s Test the reading of a frame with wrong Photometric interpretation ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('frame_00017.npy') 857s INFO:fabio.utils.ExternalResources:Image frame_00017.npy.bz2 successfully downloaded. 866s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('frame_00017.tif') 867s INFO:fabio.utils.ExternalResources:Image frame_00017.tif.bz2 successfully downloaded. 877s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 877s ok 877s INFO:memProf:Time: 21.278s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_bug502 877s test_frame (fabio.test.codecs.test_tifimage.TestTif.test_frame) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 877s INFO:fabio.utils.ExternalResources:Image Feb09-bright-00.300s_WAXS.bz2 successfully downloaded. 878s WARNING:fabio.TiffIO:Bogus StripByteCounts information 878s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 878s ERROR 878s INFO:memProf:Time: 1.096s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_frame 878s test_header (fabio.test.codecs.test_tifimage.TestTif.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 878s WARNING:fabio.TiffIO:Bogus StripByteCounts information 878s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 878s ERROR 878s INFO:memProf:Time: 0.137s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_header 878s test_read (fabio.test.codecs.test_tifimage.TestTif.test_read) 878s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 878s WARNING:fabio.TiffIO:Bogus StripByteCounts information 878s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 878s ERROR 878s INFO:memProf:Time: 0.145s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_read 878s test1 (fabio.test.codecs.test_tifimage.TestGzipTif.test1) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.tif.bz2') 878s INFO:fabio.utils.ExternalResources:Image oPPA_5grains_0001.tif.bz2 successfully downloaded. 878s ERROR 878s INFO:memProf:Time: 0.387s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestGzipTif.test1 878s test1 (fabio.test.codecs.test_tifimage.TestTif_Rect.test1) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('testmap1_0002.tif.bz2') 879s INFO:fabio.utils.ExternalResources:Image testmap1_0002.tif.bz2 successfully downloaded. 879s ERROR 879s INFO:memProf:Time: 0.166s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Rect.test1 879s test1 (fabio.test.codecs.test_tifimage.TestTifImage_A0009.test1) 879s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('a0009.tif.bz2') 879s INFO:fabio.utils.ExternalResources:Image a0009.tif.bz2 successfully downloaded. 879s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('a0009.edf.bz2') 880s INFO:fabio.utils.ExternalResources:Image a0009.edf.bz2 successfully downloaded. 880s WARNING:fabio.TiffIO:Non standard TIFF. Rows per strip TAG missing 880s WARNING:fabio.TiffIO:Non standard TIFF. Strip byte counts TAG missing 880s ok 880s INFO:memProf:Time: 1.935s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_A0009.test1 880s test1 (fabio.test.codecs.test_tifimage.TestTifImage_fit2d.test1) 880s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 881s INFO:fabio.utils.ExternalResources:Image fit2d.tif.bz2 successfully downloaded. 881s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.edf.bz2') 881s INFO:fabio.utils.ExternalResources:Image fit2d.edf.bz2 successfully downloaded. 881s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 881s WARNING:fabio.edfimage:Unknown compression scheme FALSE 881s ok 881s INFO:memProf:Time: 0.349s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_fit2d.test1 881s test1 (fabio.test.codecs.test_tifimage.TestTifImage_Packbits.test1) 881s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.tif.bz2') 881s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.edf.bz2') 881s INFO:fabio.utils.ExternalResources:Image oPPA_5grains_0001.edf.bz2 successfully downloaded. 882s ok 882s INFO:memProf:Time: 0.706s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_Packbits.test1 882s test1 (fabio.test.codecs.test_tifimage.TestTifImage_Pilatus.test1) 882s Testing pilatus tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus2M.tif.bz2') 882s INFO:fabio.utils.ExternalResources:Image pilatus2M.tif.bz2 successfully downloaded. 892s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus2M.edf.bz2') 893s INFO:fabio.utils.ExternalResources:Image pilatus2M.edf.bz2 successfully downloaded. 903s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 904s ok 904s INFO:memProf:Time: 22.157s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_Pilatus.test1 904s test_pil (fabio.test.codecs.test_tifimage.TestTif_Colormap.test_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('indexed_color.tif.bz2') 904s INFO:fabio.utils.ExternalResources:Image indexed_color.tif.bz2 successfully downloaded. 904s ok 904s INFO:memProf:Time: 0.285s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Colormap.test_pil 904s test_tiffio (fabio.test.codecs.test_tifimage.TestTif_Colormap.test_tiffio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('indexed_color.tif.bz2') 904s WARNING:fabio.tifimage:Third dimension is the color 904s WARNING:fabio.tifimage:Third dimension is the color 904s WARNING:fabio.tifimage:Third dimension is the color 904s ok 904s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Colormap.test_tiffio 905s test_all_images (fabio.test.codecs.test_tifimage.TestTif_LibTiffPic.test_all_images) ... INFO:fabio.utils.ExternalResources:Image libtiffpic.tar.gz successfully downloaded. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif with TiffIO due to Unsupported number of bits for unsigned int: (4, 4, 4), trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif: no tiff reader managed to read the file. 905s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif with TiffIO due to could not broadcast input array from shape (10,640,3) into shape (15,640,3), trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif with PIL: image file is truncated (1280 bytes not processed) 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif with TiffIO due to Unsupported number of bits for unsigned int: (10, 10, 10), trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Third dimension is the color 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif with TiffIO due to Unsupported number of bits for unsigned int: (12, 12, 12), trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif: no tiff reader managed to read the file. 905s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif: no tiff reader managed to read the file. 905s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/zackthecat.tif with TiffIO due to 273 is not in list, trying PIL 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif with TiffIO due to Unsupported number of bits for unsigned int: (10, 10, 10), trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-02.tif with TiffIO due to Unsupported number of bits for unsigned int: 2, trying PIL 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif with TiffIO due to Unsupported number of bits for unsigned int: (14, 14, 14), trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-08.tif with TiffIO due to cannot reshape array of size 3139 into shape (73,3), trying PIL 905s WARNING:fabio.tifimage:Third dimension is the color 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif with TiffIO due to Unsupported number of bits for unsigned int: (12, 12, 12), trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-04.tif with TiffIO due to Unsupported number of bits for unsigned int: 4, trying PIL 905s WARNING:fabio.tifimage:Third dimension is the color 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/ycbcr-cat.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif with TiffIO due to Unsupported number of bits for unsigned int: (14, 14, 14), trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif with TiffIO due to Unsupported number of bits for unsigned int: 6, trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/fax2d.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif with TiffIO due to Unsupported number of bits for unsigned int: 10, trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-16.tif with TiffIO due to cannot reshape array of size 3139 into shape (73,3), trying PIL 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/strike.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 905s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-08.tif with TiffIO due to Unsupported number of bits for unsigned int: (8, 8, 8, 8), trying PIL 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif with TiffIO due to Unsupported number of bits for unsigned int: 12, trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif with TiffIO due to cannot reshape array of size 65536 into shape (800), trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif with PIL: image file is truncated (126 bytes not processed) 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif with TiffIO due to %d format: a real number is required, not bytes, trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/text.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 905s ThunderDecode: Not enough data at scanline 320 (0 != 1512). 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/smallliz.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/g3test.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif with TiffIO due to Unsupported number of bits for unsigned int: 14, trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/oxford.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 905s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-08.tif with TiffIO due to Unsupported number of bits for unsigned int: (8, 8, 8, 8), trying PIL 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-tile.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-lzw.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif with TiffIO due to %d format: a real number is required, not bytes, trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif: no tiff reader managed to read the file. 905s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif with TiffIO due to Unsupported number of bits for unsigned int: (16, 16, 16, 16), trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/jim___ah.tif with TiffIO due to Unsupported number of bits for unsigned int: 1, trying PIL 905s WARNING:fabio.tifimage:Third dimension is the color 905s WARNING:fabio.tifimage:Third dimension is the color 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-palette-02.tif with TiffIO due to Unsupported number of bits for unsigned int: 2, trying PIL 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif with TiffIO due to Unsupported number of bits for unsigned int: (2, 2, 2), trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Third dimension is the color 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-palette-04.tif with TiffIO due to Unsupported number of bits for unsigned int: 4, trying PIL 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif with TiffIO due to Unsupported number of bits for unsigned int: 24, trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif with TiffIO due to Unsupported number of bits for unsigned int: (4, 4, 4), trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif: no tiff reader managed to read the file. 905s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/ladoga.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 905s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif with TiffIO due to Unsupported number of bits for unsigned int: (16, 16, 16, 16), trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-jpeg.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif with TiffIO due to Unsupported number of bits for unsigned int: (2, 2, 2), trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif with TiffIO due to cannot reshape array of size 2044 into shape (73,3), trying PIL 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif with PIL: cannot identify image file <_io.FileIO name='/tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif' mode='rb' closefd=True> 905s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif: no tiff reader managed to read the file. 905s WARNING:fabio.tifimage:Third dimension is the color 905s ok 905s INFO:memProf:Time: 1.450s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_LibTiffPic.test_all_images 905s test_invert (fabio.test.codecs.test_xsdimage.TestXSD.test_invert) 905s Tests that 2 matrixes are invert ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 906s INFO:fabio.utils.ExternalResources:Image XSDataImage.edf.bz2 successfully downloaded. 907s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 907s INFO:fabio.utils.ExternalResources:Image XSDataImage.xml.bz2 successfully downloaded. 908s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 908s INFO:fabio.utils.ExternalResources:Image XSDataImageInv.xml.bz2 successfully downloaded. 909s ok 909s INFO:memProf:Time: 3.134s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_invert 909s test_read (fabio.test.codecs.test_xsdimage.TestXSD.test_read) 909s Test reading of XSD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 909s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 909s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 909s INFO:fabio.test.codecs.test_xsdimage:XSDataImage.xml 667.15 667.1489268499176 909s INFO:fabio.test.codecs.test_xsdimage:XSDataImageInv.xml 0.01 0.010599090552568758 909s ok 909s INFO:memProf:Time: 0.015s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_read 909s test_same (fabio.test.codecs.test_xsdimage.TestXSD.test_same) 909s test if an image is the same as the EDF equivalent ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 909s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 909s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 909s ok 909s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_same 909s test_memoryleak (fabio.test.codecs.test_raxisimage.TestRaxisImage.test_memoryleak) 909s This test takes a lot of time, so only in debug mode. ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mgzn-20hpt.img.bz2') 910s INFO:fabio.utils.ExternalResources:Image mgzn-20hpt.img.bz2 successfully downloaded. 910s ok 910s INFO:memProf:Time: 1.717s RAM: 0.000 Mb fabio.test.codecs.test_raxisimage.TestRaxisImage.test_memoryleak 910s test_read (fabio.test.codecs.test_raxisimage.TestRaxisImage.test_read) 910s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mgzn-20hpt.img.bz2') 911s ERROR:fabio.raxisimage:Uncommon error encountered when reading file: Compressed file ended before the end-of-stream marker was reached 911s ERROR 911s INFO:memProf:Time: 0.655s RAM: 0.000 Mb fabio.test.codecs.test_raxisimage.TestRaxisImage.test_read 911s test_read (fabio.test.codecs.test_pnmimage.TestPNM.test_read) 911s check we can read pnm images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('image0001.pgm.bz2') 911s INFO:fabio.utils.ExternalResources:Image image0001.pgm.bz2 successfully downloaded. 911s ok 911s INFO:memProf:Time: 0.205s RAM: 0.000 Mb fabio.test.codecs.test_pnmimage.TestPNM.test_read 911s test_write (fabio.test.codecs.test_pnmimage.TestPNM.test_write) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('image0001.pgm.bz2') 911s ok 911s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pnmimage.TestPNM.test_write 911s test_multidim (fabio.test.codecs.test_numpyimage.TestNumpy.test_multidim) ... ok 911s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_multidim 911s test_read (fabio.test.codecs.test_numpyimage.TestNumpy.test_read) 911s check we can read pnm images ... ok 911s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_read 911s test_write (fabio.test.codecs.test_numpyimage.TestNumpy.test_write) 911s check we can write numpy images ... ok 911s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_write 911s test_frame (fabio.test.codecs.test_pilatusimage.TestPilatus.test_frame) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 912s INFO:fabio.utils.ExternalResources:Image lysb_5mg-1.90s_SAXS.bz2 successfully downloaded. 913s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 913s ERROR 913s INFO:memProf:Time: 1.617s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_frame 913s test_header (fabio.test.codecs.test_pilatusimage.TestPilatus.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 913s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 913s ERROR 913s INFO:memProf:Time: 0.043s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_header 913s test_read (fabio.test.codecs.test_pilatusimage.TestPilatus.test_read) 913s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 913s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 913s ERROR 913s INFO:memProf:Time: 0.044s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_read 913s test_header (fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif.bz2') 914s INFO:fabio.utils.ExternalResources:Image Pilatus1M.tif.bz2 successfully downloaded. 914s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 914s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif') 914s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 914s ok 914s INFO:memProf:Time: 0.946s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_header 914s test_read (fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_read) 914s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif.bz2') 914s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 914s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif') 914s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 914s ok 914s INFO:memProf:Time: 0.084s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_read 914s test_bug_479 (fabio.test.codecs.test_eigerimage.TestEiger.test_bug_479) ... WARNING:fabio.eigerimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 914s ok 914s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_bug_479 914s test_frames_abort_iteration (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_abort_iteration) ... ok 914s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_abort_iteration 914s test_frames_full_iteration (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_full_iteration) ... ok 914s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_full_iteration 914s test_frames_random_access (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_random_access) ... ok 914s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_random_access 914s test_open (fabio.test.codecs.test_eigerimage.TestEiger.test_open) 914s check we can read images from Eiger ... ok 914s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_open 914s test_read (fabio.test.codecs.test_eigerimage.TestEiger.test_read) 914s check we can read images from Eiger ... ok 914s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_read 914s test_write (fabio.test.codecs.test_eigerimage.TestEiger.test_write) ... WARNING:fabio.eigerimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 914s ok 914s INFO:memProf:Time: 0.011s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_write 914s test_iterate (fabio.test.codecs.test_hdf5image.TestHdf5.test_iterate) ... ok 914s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_iterate 914s test_next_frames (fabio.test.codecs.test_hdf5image.TestHdf5.test_next_frames) 914s check the legacy next API ... ok 914s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_next_frames 914s test_open (fabio.test.codecs.test_hdf5image.TestHdf5.test_open) 914s check we can read images from Eiger ... ok 914s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_open 914s test_read (fabio.test.codecs.test_hdf5image.TestHdf5.test_read) 914s check we can read images from Eiger ... ok 914s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_read 914s test_mask (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_mask) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 914s INFO:fabio.utils.ExternalResources:Image fit2d.f2d.bz2 successfully downloaded. 914s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 914s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.f2d.bz2') 915s INFO:fabio.utils.ExternalResources:Image Pilatus1M.f2d.bz2 successfully downloaded. 918s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.cbf.bz2') 919s INFO:fabio.utils.ExternalResources:Image Pilatus1M.cbf.bz2 successfully downloaded. 919s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.msk.bz2') 919s INFO:fabio.utils.ExternalResources:Image Pilatus1M.msk.bz2 successfully downloaded. 919s ok 919s INFO:memProf:Time: 5.363s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_mask 919s test_match (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_match) 919s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 919s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 919s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 919s ok 919s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_match 919s test_read (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_read) 919s Check it reads a mask OK ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 919s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 919s ok 919s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_read 919s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v2.SPE.bz2') 920s INFO:fabio.utils.ExternalResources:Image v2.SPE.bz2 successfully downloaded. 920s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v2_converted.SPE.bz2') 921s INFO:fabio.utils.ExternalResources:Image v2_converted.SPE.bz2 successfully downloaded. 921s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3.spe.bz2') 921s INFO:fabio.utils.ExternalResources:Image v3.spe.bz2 successfully downloaded. 921s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3_custom_roi.spe.bz2') 921s INFO:fabio.utils.ExternalResources:Image v3_custom_roi.spe.bz2 successfully downloaded. 921s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3_2frames.spe.bz2') 922s INFO:fabio.utils.ExternalResources:Image v3_2frames.spe.bz2 successfully downloaded. 926s test_calibration (fabio.test.codecs.test_speimage.TestSpeImage.test_calibration) ... ok 926s INFO:memProf:Time: 0.018s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_calibration 926s test_center_wavelength (fabio.test.codecs.test_speimage.TestSpeImage.test_center_wavelength) ... ok 926s INFO:memProf:Time: 0.014s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_center_wavelength 926s test_detector (fabio.test.codecs.test_speimage.TestSpeImage.test_detector) ... ok 926s INFO:memProf:Time: 0.012s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_detector 926s test_exposure_time (fabio.test.codecs.test_speimage.TestSpeImage.test_exposure_time) ... ok 926s INFO:memProf:Time: 0.012s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_exposure_time 926s test_fabio_integration (fabio.test.codecs.test_speimage.TestSpeImage.test_fabio_integration) ... ok 926s INFO:memProf:Time: 0.158s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_fabio_integration 926s test_grating (fabio.test.codecs.test_speimage.TestSpeImage.test_grating) ... ok 926s INFO:memProf:Time: 0.014s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_grating 926s test_multiple_frames (fabio.test.codecs.test_speimage.TestSpeImage.test_multiple_frames) ... ok 926s INFO:memProf:Time: 0.028s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_multiple_frames 926s test_read_data (fabio.test.codecs.test_speimage.TestSpeImage.test_read_data) ... ok 926s INFO:memProf:Time: 0.012s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_read_data 926s test_reading_version2_spe (fabio.test.codecs.test_speimage.TestSpeImage.test_reading_version2_spe) ... ok 926s INFO:memProf:Time: 0.012s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_reading_version2_spe 926s test_roi (fabio.test.codecs.test_speimage.TestSpeImage.test_roi) ... ok 926s INFO:memProf:Time: 0.020s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_roi 926s test_time (fabio.test.codecs.test_speimage.TestSpeImage.test_time) ... ok 926s INFO:memProf:Time: 0.012s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_time 926s test_read_empty_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_empty_file) ... ok 926s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_empty_file 926s test_read_failing_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_failing_file) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 926s INFO:fabio.utils.ExternalResources:Image rand_uint8.jpg.bz2 successfully downloaded. 926s ok 926s INFO:memProf:Time: 0.164s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_failing_file 926s test_read_missing_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_missing_file) ... ok 926s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_missing_file 926s test_read_uint8 (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 926s ok 926s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_uint8 926s test_read_uint8 (fabio.test.codecs.test_jpegimage.TestJpegImageInsideFabio.test_read_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 926s ok 926s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImageInsideFabio.test_read_uint8 926s test_with_pil (fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_with_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 926s ok 926s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_with_pil 926s test_without_pil (fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_without_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 926s ok 926s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_without_pil 926s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_missing_file) ... ok 926s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_missing_file 926s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 926s INFO:fabio.utils.ExternalResources:Image binned_data_uint16.jp2.bz2 successfully downloaded. 926s ok 926s INFO:memProf:Time: 0.240s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint16 926s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 926s INFO:fabio.utils.ExternalResources:Image binned_data_uint8.jp2.bz2 successfully downloaded. 926s ok 926s INFO:memProf:Time: 0.242s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint8 926s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 926s ok 926s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_wrong_format 926s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_missing_file) ... ok 926s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_missing_file 926s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 926s ok 926s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint16 926s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 926s ok 926s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint8 926s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 926s ok 926s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_wrong_format 926s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_missing_file) ... skipped 'glymur is not available or too old' 926s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_missing_file 926s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint16) ... skipped 'glymur is not available or too old' 926s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint16 926s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint8) ... skipped 'glymur is not available or too old' 926s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint8 926s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_wrong_format) ... skipped 'glymur is not available or too old' 926s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_wrong_format 926s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_missing_file) ... ok 926s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_missing_file 926s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 927s ok 927s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint16 927s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 927s ok 927s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint8 927s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 927s ok 927s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_wrong_format 927s test_read (fabio.test.codecs.test_mpaimage.TestMpa.test_read) 927s Test the reading of multiwire images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mpa_test.mpa.bz2') 927s INFO:fabio.utils.ExternalResources:Image mpa_test.mpa.bz2 successfully downloaded. 931s ok 931s INFO:memProf:Time: 3.682s RAM: 0.000 Mb fabio.test.codecs.test_mpaimage.TestMpa.test_read 931s test_read (fabio.test.codecs.test_dm3image.TestDm3Image.test_read) 931s check we can read dm3 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('ref_d20x_310mm.dm3.bz2') 931s INFO:fabio.utils.ExternalResources:Image ref_d20x_310mm.dm3.bz2 successfully downloaded. 934s ERROR 934s INFO:memProf:Time: 3.518s RAM: 0.000 Mb fabio.test.codecs.test_dm3image.TestDm3Image.test_read 934s test_read (fabio.test.codecs.test_mrcimage.TestMrc.test_read) 934s check we can read mrc images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.map.bz2') 934s INFO:fabio.utils.ExternalResources:Image EMD-3001.map.bz2 successfully downloaded. 934s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.mrc.bz2') 936s INFO:fabio.utils.ExternalResources:Image 0p67_5s_0000.mrc.bz2 successfully downloaded. 958s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.npy.bz2') 958s INFO:fabio.utils.ExternalResources:Image EMD-3001.npy.bz2 successfully downloaded. 958s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.npy.bz2') 960s INFO:fabio.utils.ExternalResources:Image 0p67_5s_0000.npy.bz2 successfully downloaded. 983s INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.mrcimage:Expected 'MAP ', got ok 983s INFO:memProf:Time: 49.623s RAM: 0.000 Mb fabio.test.codecs.test_mrcimage.TestMrc.test_read 983s test_same (fabio.test.codecs.test_mrcimage.TestMrc.test_same) 983s see if we can read mrc images and if they are the same as the numpy dump ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.map.bz2') 983s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.mrc.bz2') 983s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.npy.bz2') 983s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.npy.bz2') 983s INFO:fabio.test.codecs.test_mrcimage:Comparing files EMD-3001.map and EMD-3001.npy 983s INFO:fabio.mrcimage:Expected 'MAP ', got INFO:fabio.test.codecs.test_mrcimage:Comparing files 0p67_5s_0000.mrc and 0p67_5s_0000.npy 983s ok 983s INFO:memProf:Time: 0.016s RAM: 0.000 Mb fabio.test.codecs.test_mrcimage.TestMrc.test_same 983s test_file_series (fabio.test.codecs.test_pixiimage.TestPixiImage.test_file_series) ... ok 983s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_file_series 983s test_frames_abort_iteration (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_abort_iteration) ... ok 983s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_abort_iteration 983s test_frames_full_iteration (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_full_iteration) ... ok 983s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_full_iteration 983s test_frames_random_access (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_random_access) ... ok 983s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_random_access 983s test_multi_frame (fabio.test.codecs.test_pixiimage.TestPixiImage.test_multi_frame) ... ok 983s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_multi_frame 983s test_single_frame (fabio.test.codecs.test_pixiimage.TestPixiImage.test_single_frame) ... ok 983s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_single_frame 983s test_data (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_data) ... INFO:fabio.esperantoimage:Esperanto accepts only integer data, rounding 983s INFO:fabio.esperantoimage:Padding image to be square, multiple of 4 and of size between 256 and 4096 983s ok 983s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_data 983s test_header (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('sucrose_1s__1_1.esperanto.bz2') 985s INFO:fabio.utils.ExternalResources:Image sucrose_1s__1_1.esperanto.bz2 successfully downloaded. 986s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_l38lfv6s_ubuntu/4bytes_long.esperanto 986s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_l38lfv6s_ubuntu/agi_bitfield.esperanto 988s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 988s INFO:fabio.utils.ExternalResources:Image reference.esperanto.bz2 successfully downloaded. 988s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_l38lfv6s_ubuntu/4bytes_long.esperanto 988s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_l38lfv6s_ubuntu/agi_bitfield.esperanto 988s ok 988s INFO:memProf:Time: 4.570s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_header 988s test_read (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_read) 988s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('sucrose_1s__1_1.esperanto.bz2') 989s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 989s ok 989s INFO:memProf:Time: 1.418s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_read 989s test_values (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_values) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 989s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.npy.bz2') 990s INFO:fabio.utils.ExternalResources:Image reference.npy.bz2 successfully downloaded. 990s ok 990s INFO:memProf:Time: 0.593s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_values 990s test_frames_abort_iteration (fabio.test.codecs.test_limaimage.TestLima.test_frames_abort_iteration) ... ok 990s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_abort_iteration 990s test_frames_full_iteration (fabio.test.codecs.test_limaimage.TestLima.test_frames_full_iteration) ... ok 990s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_full_iteration 990s test_frames_random_access (fabio.test.codecs.test_limaimage.TestLima.test_frames_random_access) ... ok 990s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_random_access 990s test_identify (fabio.test.codecs.test_limaimage.TestLima.test_identify) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('output_sparse_0_00000.h5') 992s INFO:fabio.utils.ExternalResources:Image output_sparse_0_00000.h5.bz2 successfully downloaded. 994s ok 994s INFO:memProf:Time: 4.190s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_identify 994s test_open (fabio.test.codecs.test_limaimage.TestLima.test_open) 994s test_open check we can read images from Lima ... ok 994s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_open 994s test_read (fabio.test.codecs.test_limaimage.TestLima.test_read) 994s test_read check we can read images from Lima ... ok 994s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_read 994s test_write (fabio.test.codecs.test_limaimage.TestLima.test_write) ... WARNING:fabio.limaimage:hdf5plugin is needed for bitshuffle-LZ4 compression, falling back on gzip (slower) 994s ok 994s INFO:memProf:Time: 0.011s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_write 994s test_read (fabio.test.codecs.test_hipicimage.TestHiPiCImage.test_read) 994s check we can read dm3 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Radiograph_SP8_BL47XU_HiPicimage.img.bz2') 995s INFO:fabio.utils.ExternalResources:Image Radiograph_SP8_BL47XU_HiPicimage.img.bz2 successfully downloaded. 996s ERROR 996s INFO:memProf:Time: 2.288s RAM: 0.000 Mb fabio.test.codecs.test_hipicimage.TestHiPiCImage.test_read 996s test_read (fabio.test.codecs.test_binaryimage.TestBinaryImage.test_read) 996s check we can read images from Eiger ... ok 996s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_binaryimage.TestBinaryImage.test_read 996s test_write (fabio.test.codecs.test_binaryimage.TestBinaryImage.test_write) ... ok 996s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_binaryimage.TestBinaryImage.test_write 996s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0001.ccd') 997s INFO:fabio.utils.ExternalResources:Image scan0001.ccd.bz2 successfully downloaded. 997s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0005.ccd') 997s INFO:fabio.utils.ExternalResources:Image scan0005.ccd.bz2 successfully downloaded. 997s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0050.ccd') 997s INFO:fabio.utils.ExternalResources:Image scan0050.ccd.bz2 successfully downloaded. 997s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0059.ccd') 997s INFO:fabio.utils.ExternalResources:Image scan0059.ccd.bz2 successfully downloaded. 997s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0066.ccd') 997s INFO:fabio.utils.ExternalResources:Image scan0066.ccd.bz2 successfully downloaded. 997s test_parse (fabio.test.codecs.test_xcaliburimage.TestCcdCharacteristiscs.test_parse) ... ok 997s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_xcaliburimage.TestCcdCharacteristiscs.test_parse 997s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.cbf') 997s test_decomposition (fabio.test.codecs.test_xcaliburimage.testXcalibureImage.test_decomposition) ... WARNING:fabio.test.codecs.test_xcaliburimage:PyFAI not available: only a coarse description of the mask is provided 997s WARNING:fabio.xcaliburimage:PyFAI not available: only a coarse description of the mask is provided 997s ok 997s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_xcaliburimage.testXcalibureImage.test_decomposition 997s test_compress_decode_field_overflow (fabio.test.test_agi_bitfield.TestUtil.test_compress_decode_field_overflow) ... ok 997s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_compress_decode_field_overflow 997s test_compress_decompress_field_small (fabio.test.test_agi_bitfield.TestUtil.test_compress_decompress_field_small) ... ok 997s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_compress_decompress_field_small 997s test_full_compress_decompress_field (fabio.test.test_agi_bitfield.TestUtil.test_full_compress_decompress_field) ... ok 997s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_full_compress_decompress_field 997s test_get_fieldsize (fabio.test.test_agi_bitfield.TestUtil.test_get_fieldsize) ... ok 997s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_get_fieldsize 997s test_mask_conv (fabio.test.test_agi_bitfield.TestUtil.test_mask_conv) ... ok 997s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_mask_conv 998s test_compress_row_small (fabio.test.test_agi_bitfield.TestRow.test_compress_row_small) ... ok 998s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestRow.test_compress_row_small 998s test_compress_row_zero (fabio.test.test_agi_bitfield.TestRow.test_compress_row_zero) ... ok 998s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestRow.test_compress_row_zero 998s test_full_rand (fabio.test.test_agi_bitfield.TestCompression.test_full_rand) ... ok 998s INFO:memProf:Time: 0.059s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestCompression.test_full_rand 998s test_cython (fabio.test.test_densification.TestDensification.test_cython) ... ok 998s INFO:memProf:Time: 0.089s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_cython 998s test_rng_normal (fabio.test.test_densification.TestDensification.test_rng_normal) ... ok 998s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_rng_normal 998s test_rng_uniform (fabio.test.test_densification.TestDensification.test_rng_uniform) ... ok 998s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_rng_uniform 998s setUpClass (fabio.test.test_io_limits.TestEdf) ... skipped 'test requires debug level logging' 998s setUpClass (fabio.test.test_io_limits.TestTiff) ... skipped 'test requires debug level logging' 998s test_coverage (fabio.test.test_utils_cli.TestUtilShell.test_coverage) 998s test function coverage ... ok 998s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_utils_cli.TestUtilShell.test_coverage 998s test_expand_args (fabio.test.test_utils_cli.TestUtilShell.test_expand_args) ... ok 998s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_utils_cli.TestUtilShell.test_expand_args 998s 998s ====================================================================== 998s ERROR: testcase (fabio.test.test_open_header.Test1.testcase) 998s check openheader can read edf headers 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/test_open_header.py", line 48, in testcase 998s obj = openheader(name) 998s ^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 207, in openheader 998s obj.readheader(obj.filename) 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 695, in readheader 998s self._readheader(fin) 998s File "/usr/lib/python3/dist-packages/fabio/edfimage.py", line 1104, in _readheader 998s raise IOError("Empty file") 998s OSError: Empty file 998s 998s ====================================================================== 998s ERROR: testAdscGz (fabio.test.test_open_image.TestOpenDtrek.testAdscGz) 998s openimage opening adsc gzip 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/test_open_image.py", line 187, in testAdscGz 998s self.checkFile(filename) 998s File "/usr/lib/python3/dist-packages/fabio/test/test_open_image.py", line 170, in checkFile 998s obj = openimage(filename) 998s ^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 196, in openimage 998s obj = obj.read(obj.filename, frame) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/dtrekimage.py", line 94, in read 998s binary = infile.read() 998s ^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 118, in readall 998s while data := self.read(sys.maxsize): 998s ^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 0 998s 1 998s 2 998s 3 998s 4 998s 5 998s 6 998s 7 998s 8 998s 9 998s 10 998s 11 998s 12 998s 13 998s 14 998s 15 998s 16 998s 17 998s 18 998s 19 998s 20 998s 21 998s 22 998s 23 998s 24 998s 25 998s 26 998s 27 998s 28 998s 29 998s 30 998s 31 998s 32 998s 33 998s 34 998s 35 998s 36 998s 37 998s 38 998s 39 998s 40 998s 41 998s 42 998s 43 998s 44 998s 45 998s 46 998s 47 998s 48 998s 49 998s jpeg2kimage.PIL: 998s jpeg2kimage.PIL: 998s jpeg2kimage.PIL: 998s jpeg2kimage.PIL: 998s jpeg2kimage.PIL: 998s jpeg2kimage.PIL: 998s jpeg2kimage.PIL: 998s jpeg2kimage.PIL: 998s jpeg2kimage.PIL: 998s jpeg2kimage.PIL: 998s jpeg2kimage.PIL: 998s jpeg2kimage.PIL: 998s /tmp/fabio_l38lfv6s_ubuntu/lima3d.h5 998s /tmp/fabio_l38lfv6s_ubuntu/binary.npy 998s speed-up: 11.86757179483522 998s ##### 0 998s ##### 1 998s ##### 2 998s ##### 3 998s ##### 4 998s ##### 5 998s ##### 6 998s ##### 7 998s aaa [ ] 7% toto aaa [■■■■■■ ] 70% toto aaa [■■■■■■■■■■] 132% toto 998s ====================================================================== 998s ERROR: testBrukerGz (fabio.test.test_open_image.TestOpenBruker.testBrukerGz) 998s openimage opening bruker gzip 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/test_open_image.py", line 156, in testBrukerGz 998s self.checkFile(filename) 998s File "/usr/lib/python3/dist-packages/fabio/test/test_open_image.py", line 139, in checkFile 998s obj = openimage(filename) 998s ^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 196, in openimage 998s obj = obj.read(obj.filename, frame) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/brukerimage.py", line 245, in read 998s data = numpy.frombuffer(infile.read(rows * cols * npixelb), dtype=self.bpp_to_numpy[npixelb]).copy() 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 68, in readinto 998s data = self.read(len(byte_view)) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s ====================================================================== 998s ERROR: testMaskGz (fabio.test.test_open_image.TestOpenMask.testMaskGz) 998s openimage opening fit2d msk gzip 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/test_open_image.py", line 125, in testMaskGz 998s self.checkFile(filename) 998s File "/usr/lib/python3/dist-packages/fabio/test/test_open_image.py", line 107, in checkFile 998s obj = openimage(filename) 998s ^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 196, in openimage 998s obj = obj.read(obj.filename, frame) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fit2dmaskimage.py", line 82, in read 998s self._readheader(fin) 998s File "/usr/lib/python3/dist-packages/fabio/fit2dmaskimage.py", line 66, in _readheader 998s if header[j] != i[0]: 998s ~~~~~~^^^ 998s IndexError: index out of range 998s 998s ====================================================================== 998s ERROR: testMccdGz (fabio.test.test_open_image.TestOpenMccd.testMccdGz) 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/test_open_image.py", line 94, in testMccdGz 998s self.checkFile(filename) 998s File "/usr/lib/python3/dist-packages/fabio/test/test_open_image.py", line 79, in checkFile 998s obj = openimage(filename) 998s ^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 196, in openimage 998s obj = obj.read(obj.filename, frame) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/tifimage.py", line 161, in read 998s infile = self._open(fname, "rb") 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 774, in _open 998s fileObject = self._compressed_stream(fname, 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 819, in _compressed_stream 998s fobj = fabioutils.BytesIO(fo.read(), fname, mode) 998s ^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 118, in readall 998s while data := self.read(sys.maxsize): 998s ^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s ====================================================================== 998s ERROR: test_read (fabio.test.codecs.test_geimage.TestGE.test_read) (name='GE_aSI_detector_image_1529.gz') 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_geimage.py", line 73, in test_read 998s obj.read(os.path.join(UtilsTest.resources.data_home, name)) 998s File "/usr/lib/python3/dist-packages/fabio/GEimage.py", line 275, in read 998s infile = self._open(fname, "rb") 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 774, in _open 998s fileObject = self._compressed_stream(fname, 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 819, in _compressed_stream 998s fobj = fabioutils.BytesIO(fo.read(), fname, mode) 998s ^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 118, in readall 998s while data := self.read(sys.maxsize): 998s ^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s ====================================================================== 998s ERROR: test_read (fabio.test.codecs.test_bruker100image.TestBruker100.test_read) 998s check we can read bruker100 images 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_bruker100image.py", line 72, in test_read 998s obj.read(os.path.join(self.im_dir, name)) 998s File "/usr/lib/python3/dist-packages/fabio/bruker100image.py", line 238, in read 998s raw_data = infile.read(data_size_padded) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 68, in readinto 998s data = self.read(len(byte_view)) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s ====================================================================== 998s ERROR: test_same (fabio.test.codecs.test_bruker100image.TestBruker100.test_same) 998s check we can read bruker100 images 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_bruker100image.py", line 83, in test_same 998s obt = openimage(os.path.join(self.im_dir, line.split()[0])) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 196, in openimage 998s obj = obj.read(obj.filename, frame) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/bruker100image.py", line 238, in read 998s raw_data = infile.read(data_size_padded) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 68, in readinto 998s data = self.read(len(byte_view)) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s ====================================================================== 998s ERROR: test_read (fabio.test.codecs.test_mccdimage.TestFlatMccds.test_read) 998s check we can read MarCCD images 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_mccdimage.py", line 107, in test_read 998s obj.read(self.fn[name]) 998s File "/usr/lib/python3/dist-packages/fabio/tifimage.py", line 161, in read 998s infile = self._open(fname, "rb") 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 774, in _open 998s fileObject = self._compressed_stream(fname, 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 819, in _compressed_stream 998s fobj = fabioutils.BytesIO(fo.read(), fname, mode) 998s ^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 118, in readall 998s while data := self.read(sys.maxsize): 998s ^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s ====================================================================== 998s ERROR: test_read (fabio.test.codecs.test_kcdimage.TestKcd.test_read) 998s check we can read kcd images 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/kcdimage.py", line 144, in read 998s infile.seek(-expected_size, SEEK_END) 998s File "/usr/lib/python3.12/gzip.py", line 421, in seek 998s return self._buffer.seek(offset, whence) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 139, in seek 998s while self.read(io.DEFAULT_BUFFER_SIZE): 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s During handling of the above exception, another exception occurred: 998s 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_kcdimage.py", line 72, in test_read 998s raise err 998s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_kcdimage.py", line 69, in test_read 998s obj = openimage(self.fn[self.kcdfilename] + ext) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 196, in openimage 998s obj = obj.read(obj.filename, frame) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/kcdimage.py", line 149, in read 998s fileSize = infile.measure_size() 998s ^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioutils.py", line 593, in measure_size 998s end_pos = len(gzip.GzipFile.read(self)) + pos 998s ^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 118, in readall 998s while data := self.read(sys.maxsize): 998s ^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s ====================================================================== 998s ERROR: test_frame (fabio.test.codecs.test_tifimage.TestTif.test_frame) 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_tifimage.py", line 99, in test_frame 998s obj.read(UtilsTest.getimage(name)) 998s File "/usr/lib/python3/dist-packages/fabio/tifimage.py", line 161, in read 998s infile = self._open(fname, "rb") 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 774, in _open 998s fileObject = self._compressed_stream(fname, 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 819, in _compressed_stream 998s fobj = fabioutils.BytesIO(fo.read(), fname, mode) 998s ^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 118, in readall 998s while data := self.read(sys.maxsize): 998s ^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s ====================================================================== 998s ERROR: test_header (fabio.test.codecs.test_tifimage.TestTif.test_header) 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_tifimage.py", line 72, in test_header 998s obj.read(UtilsTest.getimage(name)) 998s File "/usr/lib/python3/dist-packages/fabio/tifimage.py", line 161, in read 998s infile = self._open(fname, "rb") 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 774, in _open 998s fileObject = self._compressed_stream(fname, 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 819, in _compressed_stream 998s fobj = fabioutils.BytesIO(fo.read(), fname, mode) 998s ^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 118, in readall 998s while data := self.read(sys.maxsize): 998s ^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s ====================================================================== 998s ERROR: test_read (fabio.test.codecs.test_tifimage.TestTif.test_read) 998s Test the reading of Mar345 images 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_tifimage.py", line 59, in test_read 998s obj.read(UtilsTest.getimage(name)) 998s File "/usr/lib/python3/dist-packages/fabio/tifimage.py", line 161, in read 998s infile = self._open(fname, "rb") 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 774, in _open 998s fileObject = self._compressed_stream(fname, 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 819, in _compressed_stream 998s fobj = fabioutils.BytesIO(fo.read(), fname, mode) 998s ^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 118, in readall 998s while data := self.read(sys.maxsize): 998s ^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s ====================================================================== 998s ERROR: test1 (fabio.test.codecs.test_tifimage.TestGzipTif.test1) 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_tifimage.py", line 205, in test1 998s o1 = fabio.open(self.zipped) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 196, in openimage 998s obj = obj.read(obj.filename, frame) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/tifimage.py", line 161, in read 998s infile = self._open(fname, "rb") 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 774, in _open 998s fileObject = self._compressed_stream(fname, 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 819, in _compressed_stream 998s fobj = fabioutils.BytesIO(fo.read(), fname, mode) 998s ^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 118, in readall 998s while data := self.read(sys.maxsize): 998s ^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s ====================================================================== 998s ERROR: test1 (fabio.test.codecs.test_tifimage.TestTif_Rect.test1) 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 249, in _openimage 998s filetype = do_magic(magic_bytes, filename) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 153, in do_magic 998s raise Exception("Could not interpret magic string") 998s Exception: Could not interpret magic string 998s 998s During handling of the above exception, another exception occurred: 998s 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 260, in _openimage 998s raise Exception("openimage failed on magic bytes & name guess") 998s Exception: openimage failed on magic bytes & name guess 998s 998s During handling of the above exception, another exception occurred: 998s 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_tifimage.py", line 218, in test1 998s o1 = fabio.open(self.fn + ext) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 194, in openimage 998s obj = _openimage(filename) 998s ^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 265, in _openimage 998s raise IOError("Fabio could not identify " + filename) 998s OSError: Fabio could not identify /tmp/fabio_testdata_ubuntu/testmap1_0002.tif.gz 998s 998s ====================================================================== 998s ERROR: test_read (fabio.test.codecs.test_raxisimage.TestRaxisImage.test_read) 998s Test the reading of Mar345 images 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_raxisimage.py", line 71, in test_read 998s obj.read(os.path.join(os.path.dirname(self.mar), name)) 998s File "/usr/lib/python3/dist-packages/fabio/raxisimage.py", line 302, in read 998s rawData = infile.read(size) 998s ^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 68, in readinto 998s data = self.read(len(byte_view)) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s ====================================================================== 998s ERROR: test_frame (fabio.test.codecs.test_pilatusimage.TestPilatus.test_frame) 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_pilatusimage.py", line 109, in test_frame 998s obj.read(UtilsTest.getimage(name)) 998s File "/usr/lib/python3/dist-packages/fabio/tifimage.py", line 161, in read 998s infile = self._open(fname, "rb") 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 774, in _open 998s fileObject = self._compressed_stream(fname, 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 819, in _compressed_stream 998s fobj = fabioutils.BytesIO(fo.read(), fname, mode) 998s ^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 118, in readall 998s while data := self.read(sys.maxsize): 998s ^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s ====================================================================== 998s ERROR: test_header (fabio.test.codecs.test_pilatusimage.TestPilatus.test_header) 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_pilatusimage.py", line 71, in test_header 998s obj.read(UtilsTest.getimage(name)) 998s File "/usr/lib/python3/dist-packages/fabio/tifimage.py", line 161, in read 998s infile = self._open(fname, "rb") 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 774, in _open 998s fileObject = self._compressed_stream(fname, 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 819, in _compressed_stream 998s fobj = fabioutils.BytesIO(fo.read(), fname, mode) 998s ^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 118, in readall 998s while data := self.read(sys.maxsize): 998s ^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s ====================================================================== 998s ERROR: test_read (fabio.test.codecs.test_pilatusimage.TestPilatus.test_read) 998s Test the reading of Mar345 images 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_pilatusimage.py", line 59, in test_read 998s obj.read(UtilsTest.getimage(name)) 998s File "/usr/lib/python3/dist-packages/fabio/tifimage.py", line 161, in read 998s infile = self._open(fname, "rb") 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 774, in _open 998s fileObject = self._compressed_stream(fname, 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/fabioimage.py", line 819, in _compressed_stream 998s fobj = fabioutils.BytesIO(fo.read(), fname, mode) 998s ^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 118, in readall 998s while data := self.read(sys.maxsize): 998s ^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s ====================================================================== 998s ERROR: test_read (fabio.test.codecs.test_dm3image.TestDm3Image.test_read) 998s check we can read dm3 images 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_dm3image.py", line 73, in test_read 998s obj1.read(fname) 998s File "/usr/lib/python3/dist-packages/fabio/dm3image.py", line 125, in read 998s self.read_tag_entry() 998s File "/usr/lib/python3/dist-packages/fabio/dm3image.py", line 181, in read_tag_entry 998s value = self.read_tag_type() 998s ^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/dm3image.py", line 214, in read_tag_type 998s return self.readbytes(read_no_bytes, fmt, swap=self.swap) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3/dist-packages/fabio/dm3image.py", line 145, in readbytes 998s raw = self.infile.read(bytes_to_read) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 68, in readinto 998s data = self.read(len(byte_view)) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s ====================================================================== 998s ERROR: test_read (fabio.test.codecs.test_hipicimage.TestHiPiCImage.test_read) 998s check we can read dm3 images 998s ---------------------------------------------------------------------- 998s Traceback (most recent call last): 998s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_hipicimage.py", line 67, in test_read 998s obj1.read(fname) 998s File "/usr/lib/python3/dist-packages/fabio/HiPiCimage.py", line 114, in read 998s block = infile.read(dim1 * dim2 * dtype.itemsize) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 324, in read 998s return self._buffer.read(size) 998s ^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/_compression.py", line 68, in readinto 998s data = self.read(len(byte_view)) 998s ^^^^^^^^^^^^^^^^^^^^^^^^^ 998s File "/usr/lib/python3.12/gzip.py", line 547, in read 998s raise EOFError("Compressed file ended before the " 998s EOFError: Compressed file ended before the end-of-stream marker was reached 998s 998s ---------------------------------------------------------------------- 998s Ran 354 tests in 307.803s 998s 998s FAILED (errors=21, skipped=7) 998s autopkgtest [18:46:24]: test command1: -----------------------] 999s autopkgtest [18:46:25]: test command1: - - - - - - - - - - results - - - - - - - - - - 999s command1 FAIL non-zero exit status 1 999s autopkgtest [18:46:25]: @@@@@@@@@@@@@@@@@@@@ summary 999s command1 FAIL non-zero exit status 1 1018s Creating nova instance adt-noble-arm64-python-fabio-20231118-182946-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-arm64-server-20231118.img (UUID fb12b403-5f57-447f-bf0a-2d959382c5e2)...