0s autopkgtest [14:10:52]: starting date and time: 2024-06-12 14:10:52+0000 0s autopkgtest [14:10:52]: git checkout: 433ed4cb Merge branch 'skia/nova_flock' into 'ubuntu/5.34+prod' 0s autopkgtest [14:10:52]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.4vh4ruwr/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade libssw --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.39-0ubuntu9 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-15.secgroup --name adt-oracular-arm64-libssw-20240612-122509-juju-7f2275-prod-proposed-migration-environment-2-ad60420d-03a8-4458-8672-120293c3300b --image adt/ubuntu-oracular-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 605s autopkgtest [14:20:57]: testbed dpkg architecture: arm64 606s autopkgtest [14:20:58]: testbed apt version: 2.9.3 606s autopkgtest [14:20:58]: @@@@@@@@@@@@@@@@@@@@ test bed setup 606s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [110 kB] 606s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [2564 B] 606s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [388 kB] 607s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [40.2 kB] 607s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [7052 B] 607s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 Packages [72.7 kB] 607s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/restricted arm64 Packages [33.3 kB] 607s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/universe arm64 Packages [347 kB] 607s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse arm64 Packages [7576 B] 607s Fetched 1009 kB in 1s (1104 kB/s) 607s Reading package lists... 611s Reading package lists... 612s Building dependency tree... 612s Reading state information... 612s Calculating upgrade... 613s The following packages will be upgraded: 613s libc-bin libc-dev-bin libc-devtools libc6 libc6-dev locales 613s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 613s Need to get 9244 kB of archives. 613s After this operation, 0 B of additional disk space will be used. 613s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 libc-devtools arm64 2.39-0ubuntu9 [27.8 kB] 613s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 libc6-dev arm64 2.39-0ubuntu9 [1595 kB] 614s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 libc-dev-bin arm64 2.39-0ubuntu9 [19.7 kB] 614s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 libc6 arm64 2.39-0ubuntu9 [2776 kB] 614s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 libc-bin arm64 2.39-0ubuntu9 [591 kB] 614s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 locales all 2.39-0ubuntu9 [4235 kB] 626s Preconfiguring packages ... 640s Fetched 9244 kB in 1s (9620 kB/s) 643s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78263 files and directories currently installed.) 643s Preparing to unpack .../libc-devtools_2.39-0ubuntu9_arm64.deb ... 643s Unpacking libc-devtools (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 645s Preparing to unpack .../libc6-dev_2.39-0ubuntu9_arm64.deb ... 645s Unpacking libc6-dev:arm64 (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 648s Preparing to unpack .../libc-dev-bin_2.39-0ubuntu9_arm64.deb ... 648s Unpacking libc-dev-bin (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 649s Preparing to unpack .../libc6_2.39-0ubuntu9_arm64.deb ... 649s Unpacking libc6:arm64 (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 650s Setting up libc6:arm64 (2.39-0ubuntu9) ... 651s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78263 files and directories currently installed.) 651s Preparing to unpack .../libc-bin_2.39-0ubuntu9_arm64.deb ... 651s Unpacking libc-bin (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 651s Setting up libc-bin (2.39-0ubuntu9) ... 651s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78263 files and directories currently installed.) 651s Preparing to unpack .../locales_2.39-0ubuntu9_all.deb ... 651s Unpacking locales (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 652s Setting up locales (2.39-0ubuntu9) ... 653s Generating locales (this might take a while)... 657s en_US.UTF-8... done 657s Generation complete. 657s Setting up libc-dev-bin (2.39-0ubuntu9) ... 657s Setting up libc-devtools (2.39-0ubuntu9) ... 657s Setting up libc6-dev:arm64 (2.39-0ubuntu9) ... 657s Processing triggers for man-db (2.12.1-2) ... 659s Reading package lists... 660s Building dependency tree... 660s Reading state information... 660s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 663s Hit:1 http://ftpmaster.internal/ubuntu oracular InRelease 663s Hit:2 http://ftpmaster.internal/ubuntu oracular-updates InRelease 663s Hit:3 http://ftpmaster.internal/ubuntu oracular-security InRelease 663s Hit:4 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 668s Reading package lists... 668s Reading package lists... 669s Building dependency tree... 669s Reading state information... 669s Calculating upgrade... 669s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 670s Reading package lists... 670s Building dependency tree... 670s Reading state information... 673s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 685s autopkgtest [14:22:17]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP PREEMPT_DYNAMIC Sat Apr 20 02:32:42 UTC 2024 686s autopkgtest [14:22:18]: @@@@@@@@@@@@@@@@@@@@ apt-source libssw 696s Get:1 http://ftpmaster.internal/ubuntu oracular/universe libssw 1.1-14build1 (dsc) [2501 B] 696s Get:2 http://ftpmaster.internal/ubuntu oracular/universe libssw 1.1-14build1 (tar) [12.3 MB] 696s Get:3 http://ftpmaster.internal/ubuntu oracular/universe libssw 1.1-14build1 (diff) [54.3 kB] 697s gpgv: Signature made Mon Apr 22 09:48:29 2024 UTC 697s gpgv: using RSA key 4FB588A84C2DDE79A74C77876FA458DD1DB03F71 697s gpgv: issuer "juliank@ubuntu.com" 697s gpgv: Can't check signature: No public key 697s dpkg-source: warning: cannot verify inline signature for ./libssw_1.1-14build1.dsc: no acceptable signature found 698s autopkgtest [14:22:30]: testing package libssw version 1.1-14build1 700s autopkgtest [14:22:32]: build not needed 711s autopkgtest [14:22:43]: test build-lib: preparing testbed 714s Reading package lists... 714s Building dependency tree... 714s Reading state information... 715s Starting pkgProblemResolver with broken count: 0 715s Starting 2 pkgProblemResolver with broken count: 0 715s Done 715s The following additional packages will be installed: 715s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 715s g++ g++-13 g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-13 715s gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu libasan8 libatomic1 libcc1-0 715s libgcc-13-dev libgomp1 libhwasan0 libisl23 libitm1 liblsan0 libmpc3 715s libssw-dev libssw0 libstdc++-13-dev libtsan2 libubsan1 zlib1g-dev 715s Suggested packages: 715s cpp-doc gcc-13-locales cpp-13-doc gcc-13-doc gcc-multilib manpages-dev 715s autoconf automake libtool flex bison gdb gcc-doc gdb-aarch64-linux-gnu 715s libstdc++-13-doc 715s The following NEW packages will be installed: 715s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 715s cpp-aarch64-linux-gnu g++ g++-13 g++-13-aarch64-linux-gnu 715s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 715s gcc-aarch64-linux-gnu libasan8 libatomic1 libcc1-0 libgcc-13-dev libgomp1 715s libhwasan0 libisl23 libitm1 liblsan0 libmpc3 libssw-dev libssw0 715s libstdc++-13-dev libtsan2 libubsan1 zlib1g-dev 716s 0 upgraded, 30 newly installed, 0 to remove and 0 not upgraded. 716s Need to get 59.0 MB/59.0 MB of archives. 716s After this operation, 204 MB of additional disk space will be used. 716s Get:1 /tmp/autopkgtest.dYmFa3/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [728 B] 716s Get:2 http://ftpmaster.internal/ubuntu oracular/main arm64 libisl23 arm64 0.26-3build1 [669 kB] 716s Get:3 http://ftpmaster.internal/ubuntu oracular/main arm64 libmpc3 arm64 1.3.1-1build1 [56.4 kB] 716s Get:4 http://ftpmaster.internal/ubuntu oracular/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-23ubuntu4 [10.3 MB] 717s Get:5 http://ftpmaster.internal/ubuntu oracular/main arm64 cpp-13 arm64 13.2.0-23ubuntu4 [1032 B] 717s Get:6 http://ftpmaster.internal/ubuntu oracular/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 717s Get:7 http://ftpmaster.internal/ubuntu oracular/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 717s Get:8 http://ftpmaster.internal/ubuntu oracular/main arm64 libcc1-0 arm64 14.1.0-1ubuntu1 [49.4 kB] 717s Get:9 http://ftpmaster.internal/ubuntu oracular/main arm64 libgomp1 arm64 14.1.0-1ubuntu1 [144 kB] 717s Get:10 http://ftpmaster.internal/ubuntu oracular/main arm64 libitm1 arm64 14.1.0-1ubuntu1 [27.9 kB] 717s Get:11 http://ftpmaster.internal/ubuntu oracular/main arm64 libatomic1 arm64 14.1.0-1ubuntu1 [11.4 kB] 717s Get:12 http://ftpmaster.internal/ubuntu oracular/main arm64 libasan8 arm64 14.1.0-1ubuntu1 [2922 kB] 717s Get:13 http://ftpmaster.internal/ubuntu oracular/main arm64 liblsan0 arm64 14.1.0-1ubuntu1 [1286 kB] 717s Get:14 http://ftpmaster.internal/ubuntu oracular/main arm64 libtsan2 arm64 14.1.0-1ubuntu1 [2692 kB] 717s Get:15 http://ftpmaster.internal/ubuntu oracular/main arm64 libubsan1 arm64 14.1.0-1ubuntu1 [1155 kB] 717s Get:16 http://ftpmaster.internal/ubuntu oracular/main arm64 libhwasan0 arm64 14.1.0-1ubuntu1 [1604 kB] 717s Get:17 http://ftpmaster.internal/ubuntu oracular/main arm64 libgcc-13-dev arm64 13.2.0-23ubuntu4 [2470 kB] 717s Get:18 http://ftpmaster.internal/ubuntu oracular/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-23ubuntu4 [20.1 MB] 718s Get:19 http://ftpmaster.internal/ubuntu oracular/main arm64 gcc-13 arm64 13.2.0-23ubuntu4 [472 kB] 718s Get:20 http://ftpmaster.internal/ubuntu oracular/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 718s Get:21 http://ftpmaster.internal/ubuntu oracular/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 718s Get:22 http://ftpmaster.internal/ubuntu oracular/main arm64 libstdc++-13-dev arm64 13.2.0-23ubuntu4 [2379 kB] 718s Get:23 http://ftpmaster.internal/ubuntu oracular/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-23ubuntu4 [11.7 MB] 718s Get:24 http://ftpmaster.internal/ubuntu oracular/main arm64 g++-13 arm64 13.2.0-23ubuntu4 [14.5 kB] 718s Get:25 http://ftpmaster.internal/ubuntu oracular/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 718s Get:26 http://ftpmaster.internal/ubuntu oracular/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 718s Get:27 http://ftpmaster.internal/ubuntu oracular/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 718s Get:28 http://ftpmaster.internal/ubuntu oracular/universe arm64 libssw0 arm64 1.1-14build1 [21.4 kB] 718s Get:29 http://ftpmaster.internal/ubuntu oracular/universe arm64 libssw-dev arm64 1.1-14build1 [23.2 kB] 718s Get:30 http://ftpmaster.internal/ubuntu oracular/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3.1ubuntu2 [894 kB] 727s Fetched 59.0 MB in 2s (24.8 MB/s) 728s Selecting previously unselected package libisl23:arm64. 728s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78263 files and directories currently installed.) 728s Preparing to unpack .../00-libisl23_0.26-3build1_arm64.deb ... 728s Unpacking libisl23:arm64 (0.26-3build1) ... 728s Selecting previously unselected package libmpc3:arm64. 730s Preparing to unpack .../01-libmpc3_1.3.1-1build1_arm64.deb ... 730s Unpacking libmpc3:arm64 (1.3.1-1build1) ... 730s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 731s Preparing to unpack .../02-cpp-13-aarch64-linux-gnu_13.2.0-23ubuntu4_arm64.deb ... 731s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-23ubuntu4) ... 731s Selecting previously unselected package cpp-13. 731s Preparing to unpack .../03-cpp-13_13.2.0-23ubuntu4_arm64.deb ... 731s Unpacking cpp-13 (13.2.0-23ubuntu4) ... 732s Selecting previously unselected package cpp-aarch64-linux-gnu. 732s Preparing to unpack .../04-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 732s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 732s Selecting previously unselected package cpp. 732s Preparing to unpack .../05-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 732s Unpacking cpp (4:13.2.0-7ubuntu1) ... 732s Selecting previously unselected package libcc1-0:arm64. 732s Preparing to unpack .../06-libcc1-0_14.1.0-1ubuntu1_arm64.deb ... 732s Unpacking libcc1-0:arm64 (14.1.0-1ubuntu1) ... 732s Selecting previously unselected package libgomp1:arm64. 732s Preparing to unpack .../07-libgomp1_14.1.0-1ubuntu1_arm64.deb ... 732s Unpacking libgomp1:arm64 (14.1.0-1ubuntu1) ... 732s Selecting previously unselected package libitm1:arm64. 732s Preparing to unpack .../08-libitm1_14.1.0-1ubuntu1_arm64.deb ... 732s Unpacking libitm1:arm64 (14.1.0-1ubuntu1) ... 732s Selecting previously unselected package libatomic1:arm64. 732s Preparing to unpack .../09-libatomic1_14.1.0-1ubuntu1_arm64.deb ... 732s Unpacking libatomic1:arm64 (14.1.0-1ubuntu1) ... 732s Selecting previously unselected package libasan8:arm64. 732s Preparing to unpack .../10-libasan8_14.1.0-1ubuntu1_arm64.deb ... 732s Unpacking libasan8:arm64 (14.1.0-1ubuntu1) ... 732s Selecting previously unselected package liblsan0:arm64. 732s Preparing to unpack .../11-liblsan0_14.1.0-1ubuntu1_arm64.deb ... 732s Unpacking liblsan0:arm64 (14.1.0-1ubuntu1) ... 732s Selecting previously unselected package libtsan2:arm64. 732s Preparing to unpack .../12-libtsan2_14.1.0-1ubuntu1_arm64.deb ... 732s Unpacking libtsan2:arm64 (14.1.0-1ubuntu1) ... 732s Selecting previously unselected package libubsan1:arm64. 732s Preparing to unpack .../13-libubsan1_14.1.0-1ubuntu1_arm64.deb ... 732s Unpacking libubsan1:arm64 (14.1.0-1ubuntu1) ... 732s Selecting previously unselected package libhwasan0:arm64. 732s Preparing to unpack .../14-libhwasan0_14.1.0-1ubuntu1_arm64.deb ... 732s Unpacking libhwasan0:arm64 (14.1.0-1ubuntu1) ... 732s Selecting previously unselected package libgcc-13-dev:arm64. 733s Preparing to unpack .../15-libgcc-13-dev_13.2.0-23ubuntu4_arm64.deb ... 733s Unpacking libgcc-13-dev:arm64 (13.2.0-23ubuntu4) ... 733s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 734s Preparing to unpack .../16-gcc-13-aarch64-linux-gnu_13.2.0-23ubuntu4_arm64.deb ... 734s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-23ubuntu4) ... 734s Selecting previously unselected package gcc-13. 734s Preparing to unpack .../17-gcc-13_13.2.0-23ubuntu4_arm64.deb ... 734s Unpacking gcc-13 (13.2.0-23ubuntu4) ... 734s Selecting previously unselected package gcc-aarch64-linux-gnu. 734s Preparing to unpack .../18-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 734s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 734s Selecting previously unselected package gcc. 734s Preparing to unpack .../19-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 734s Unpacking gcc (4:13.2.0-7ubuntu1) ... 734s Selecting previously unselected package libstdc++-13-dev:arm64. 734s Preparing to unpack .../20-libstdc++-13-dev_13.2.0-23ubuntu4_arm64.deb ... 734s Unpacking libstdc++-13-dev:arm64 (13.2.0-23ubuntu4) ... 735s Selecting previously unselected package g++-13-aarch64-linux-gnu. 735s Preparing to unpack .../21-g++-13-aarch64-linux-gnu_13.2.0-23ubuntu4_arm64.deb ... 735s Unpacking g++-13-aarch64-linux-gnu (13.2.0-23ubuntu4) ... 735s Selecting previously unselected package g++-13. 737s Preparing to unpack .../22-g++-13_13.2.0-23ubuntu4_arm64.deb ... 737s Unpacking g++-13 (13.2.0-23ubuntu4) ... 737s Selecting previously unselected package g++-aarch64-linux-gnu. 737s Preparing to unpack .../23-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 737s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 737s Selecting previously unselected package g++. 737s Preparing to unpack .../24-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 737s Unpacking g++ (4:13.2.0-7ubuntu1) ... 737s Selecting previously unselected package build-essential. 737s Preparing to unpack .../25-build-essential_12.10ubuntu1_arm64.deb ... 737s Unpacking build-essential (12.10ubuntu1) ... 737s Selecting previously unselected package libssw0:arm64. 738s Preparing to unpack .../26-libssw0_1.1-14build1_arm64.deb ... 738s Unpacking libssw0:arm64 (1.1-14build1) ... 738s Selecting previously unselected package libssw-dev:arm64. 738s Preparing to unpack .../27-libssw-dev_1.1-14build1_arm64.deb ... 738s Unpacking libssw-dev:arm64 (1.1-14build1) ... 738s Selecting previously unselected package zlib1g-dev:arm64. 739s Preparing to unpack .../28-zlib1g-dev_1%3a1.3.dfsg-3.1ubuntu2_arm64.deb ... 739s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3.1ubuntu2) ... 739s Selecting previously unselected package autopkgtest-satdep. 739s Preparing to unpack .../29-1-autopkgtest-satdep.deb ... 739s Unpacking autopkgtest-satdep (0) ... 739s Setting up libgomp1:arm64 (14.1.0-1ubuntu1) ... 739s Setting up libmpc3:arm64 (1.3.1-1build1) ... 739s Setting up libatomic1:arm64 (14.1.0-1ubuntu1) ... 739s Setting up libubsan1:arm64 (14.1.0-1ubuntu1) ... 739s Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3.1ubuntu2) ... 739s Setting up libhwasan0:arm64 (14.1.0-1ubuntu1) ... 739s Setting up libasan8:arm64 (14.1.0-1ubuntu1) ... 739s Setting up libtsan2:arm64 (14.1.0-1ubuntu1) ... 739s Setting up libisl23:arm64 (0.26-3build1) ... 739s Setting up libssw0:arm64 (1.1-14build1) ... 739s Setting up libcc1-0:arm64 (14.1.0-1ubuntu1) ... 739s Setting up liblsan0:arm64 (14.1.0-1ubuntu1) ... 739s Setting up libitm1:arm64 (14.1.0-1ubuntu1) ... 739s Setting up cpp-13-aarch64-linux-gnu (13.2.0-23ubuntu4) ... 739s Setting up libssw-dev:arm64 (1.1-14build1) ... 739s Setting up cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 739s Setting up libgcc-13-dev:arm64 (13.2.0-23ubuntu4) ... 739s Setting up libstdc++-13-dev:arm64 (13.2.0-23ubuntu4) ... 739s Setting up cpp-13 (13.2.0-23ubuntu4) ... 739s Setting up gcc-13-aarch64-linux-gnu (13.2.0-23ubuntu4) ... 739s Setting up gcc-13 (13.2.0-23ubuntu4) ... 739s Setting up cpp (4:13.2.0-7ubuntu1) ... 739s Setting up g++-13-aarch64-linux-gnu (13.2.0-23ubuntu4) ... 739s Setting up gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 739s Setting up g++-13 (13.2.0-23ubuntu4) ... 739s Setting up gcc (4:13.2.0-7ubuntu1) ... 739s Setting up g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 739s Setting up g++ (4:13.2.0-7ubuntu1) ... 739s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 739s Setting up build-essential (12.10ubuntu1) ... 739s Setting up autopkgtest-satdep (0) ... 739s Processing triggers for man-db (2.12.1-2) ... 740s Processing triggers for libc-bin (2.39-0ubuntu9) ... 746s (Reading database ... 79440 files and directories currently installed.) 746s Removing autopkgtest-satdep (0) ... 747s autopkgtest [14:23:19]: test build-lib: [----------------------- 749s optimal_alignment_score: 21 sub-optimal_alignment_score: 8 target_begin: 9 target_end: 22 query_begin: 1 query_end: 15 749s 749s Target: 9 CTGACCCGG-AAATC 22 749s ||||*||||*||||| 749s Query: 1 CTGAGCCGGTAAATC 15 749s 750s ===== SSW result ===== 750s Best Smith-Waterman score: 21 750s Next-best Smith-Waterman score: 8 750s Reference start: 8 750s Reference end: 21 750s Query start: 0 750s Query end: 14 750s Next-best reference end: 4 750s Number of mismatches: 2 750s Cigar: 4=1X4=1I5= 750s ====================== 750s autopkgtest [14:23:22]: test build-lib: -----------------------] 751s build-lib PASS 751s autopkgtest [14:23:23]: test build-lib: - - - - - - - - - - results - - - - - - - - - - 752s autopkgtest [14:23:24]: test build-lib-java: preparing testbed 1136s autopkgtest [14:29:48]: testbed dpkg architecture: arm64 1137s autopkgtest [14:29:49]: testbed apt version: 2.9.3 1137s autopkgtest [14:29:49]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1138s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [110 kB] 1139s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [39.2 kB] 1139s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [384 kB] 1139s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [2564 B] 1139s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [7052 B] 1139s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 Packages [71.4 kB] 1139s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/restricted arm64 Packages [33.3 kB] 1139s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/universe arm64 Packages [341 kB] 1139s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse arm64 Packages [7576 B] 1139s Fetched 996 kB in 1s (745 kB/s) 1139s Reading package lists... 1155s Reading package lists... 1156s Building dependency tree... 1156s Reading state information... 1156s Calculating upgrade... 1157s The following packages will be upgraded: 1157s libc-bin libc-dev-bin libc-devtools libc6 libc6-dev locales 1158s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1158s Need to get 9244 kB of archives. 1158s After this operation, 0 B of additional disk space will be used. 1158s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 libc-devtools arm64 2.39-0ubuntu9 [27.8 kB] 1158s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 libc6-dev arm64 2.39-0ubuntu9 [1595 kB] 1158s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 libc-dev-bin arm64 2.39-0ubuntu9 [19.7 kB] 1158s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 libc6 arm64 2.39-0ubuntu9 [2776 kB] 1158s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 libc-bin arm64 2.39-0ubuntu9 [591 kB] 1158s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 locales all 2.39-0ubuntu9 [4235 kB] 1165s Preconfiguring packages ... 1166s Fetched 9244 kB in 1s (8009 kB/s) 1167s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78263 files and directories currently installed.) 1167s Preparing to unpack .../libc-devtools_2.39-0ubuntu9_arm64.deb ... 1167s Unpacking libc-devtools (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 1168s Preparing to unpack .../libc6-dev_2.39-0ubuntu9_arm64.deb ... 1168s Unpacking libc6-dev:arm64 (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 1168s Preparing to unpack .../libc-dev-bin_2.39-0ubuntu9_arm64.deb ... 1168s Unpacking libc-dev-bin (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 1169s Preparing to unpack .../libc6_2.39-0ubuntu9_arm64.deb ... 1171s Unpacking libc6:arm64 (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 1173s Setting up libc6:arm64 (2.39-0ubuntu9) ... 1180s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78263 files and directories currently installed.) 1180s Preparing to unpack .../libc-bin_2.39-0ubuntu9_arm64.deb ... 1180s Unpacking libc-bin (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 1183s Setting up libc-bin (2.39-0ubuntu9) ... 1186s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78263 files and directories currently installed.) 1186s Preparing to unpack .../locales_2.39-0ubuntu9_all.deb ... 1186s Unpacking locales (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 1189s Setting up locales (2.39-0ubuntu9) ... 1199s Generating locales (this might take a while)... 1212s en_US.UTF-8... done 1212s Generation complete. 1215s Setting up libc-dev-bin (2.39-0ubuntu9) ... 1215s Setting up libc-devtools (2.39-0ubuntu9) ... 1215s Setting up libc6-dev:arm64 (2.39-0ubuntu9) ... 1215s Processing triggers for man-db (2.12.1-2) ... 1220s Reading package lists... 1220s Building dependency tree... 1220s Reading state information... 1221s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1226s Hit:1 http://ftpmaster.internal/ubuntu oracular InRelease 1226s Hit:2 http://ftpmaster.internal/ubuntu oracular-updates InRelease 1226s Hit:3 http://ftpmaster.internal/ubuntu oracular-security InRelease 1226s Hit:4 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 1252s Reading package lists... 1254s Reading package lists... 1254s Building dependency tree... 1254s Reading state information... 1254s Calculating upgrade... 1255s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1255s Reading package lists... 1256s Building dependency tree... 1256s Reading state information... 1256s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1276s Reading package lists... 1276s Building dependency tree... 1276s Reading state information... 1277s Starting pkgProblemResolver with broken count: 0 1277s Starting 2 pkgProblemResolver with broken count: 0 1277s Done 1277s The following additional packages will be installed: 1277s ca-certificates-java default-jdk-headless default-jre-headless java-common 1277s liblcms2-2 libpcsclite1 libssw-java openjdk-21-jdk-headless 1277s openjdk-21-jre-headless 1277s Suggested packages: 1277s default-jre liblcms2-utils pcscd openjdk-21-demo openjdk-21-source 1277s libnss-mdns fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho 1277s fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic 1277s Recommended packages: 1277s libcups2t64 libharfbuzz0b libasound2t64 1278s The following NEW packages will be installed: 1278s autopkgtest-satdep ca-certificates-java default-jdk-headless 1278s default-jre-headless java-common liblcms2-2 libpcsclite1 libssw-java 1278s openjdk-21-jdk-headless openjdk-21-jre-headless 1278s 0 upgraded, 10 newly installed, 0 to remove and 0 not upgraded. 1278s Need to get 128 MB/128 MB of archives. 1278s After this operation, 300 MB of additional disk space will be used. 1278s Get:1 /tmp/autopkgtest.dYmFa3/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [728 B] 1278s Get:2 http://ftpmaster.internal/ubuntu oracular/main arm64 ca-certificates-java all 20240118 [11.6 kB] 1278s Get:3 http://ftpmaster.internal/ubuntu oracular/main arm64 java-common all 0.75+exp1 [6798 B] 1278s Get:4 http://ftpmaster.internal/ubuntu oracular/main arm64 liblcms2-2 arm64 2.14-2build1 [161 kB] 1279s Get:5 http://ftpmaster.internal/ubuntu oracular/main arm64 libpcsclite1 arm64 2.2.3-1 [24.0 kB] 1279s Get:6 http://ftpmaster.internal/ubuntu oracular/main arm64 openjdk-21-jre-headless arm64 21.0.3+9-1ubuntu1 [45.8 MB] 1281s Get:7 http://ftpmaster.internal/ubuntu oracular/main arm64 default-jre-headless arm64 2:1.21-75+exp1 [3096 B] 1281s Get:8 http://ftpmaster.internal/ubuntu oracular/main arm64 openjdk-21-jdk-headless arm64 21.0.3+9-1ubuntu1 [81.6 MB] 1283s Get:9 http://ftpmaster.internal/ubuntu oracular/main arm64 default-jdk-headless arm64 2:1.21-75+exp1 [960 B] 1283s Get:10 http://ftpmaster.internal/ubuntu oracular/universe arm64 libssw-java arm64 1.1-14build1 [18.3 kB] 1297s Fetched 128 MB in 5s (25.6 MB/s) 1300s Selecting previously unselected package ca-certificates-java. 1300s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78263 files and directories currently installed.) 1300s Preparing to unpack .../0-ca-certificates-java_20240118_all.deb ... 1300s Unpacking ca-certificates-java (20240118) ... 1301s Selecting previously unselected package java-common. 1304s Preparing to unpack .../1-java-common_0.75+exp1_all.deb ... 1304s Unpacking java-common (0.75+exp1) ... 1305s Selecting previously unselected package liblcms2-2:arm64. 1308s Preparing to unpack .../2-liblcms2-2_2.14-2build1_arm64.deb ... 1308s Unpacking liblcms2-2:arm64 (2.14-2build1) ... 1308s Selecting previously unselected package libpcsclite1:arm64. 1310s Preparing to unpack .../3-libpcsclite1_2.2.3-1_arm64.deb ... 1310s Unpacking libpcsclite1:arm64 (2.2.3-1) ... 1310s Selecting previously unselected package openjdk-21-jre-headless:arm64. 1310s Preparing to unpack .../4-openjdk-21-jre-headless_21.0.3+9-1ubuntu1_arm64.deb ... 1310s Unpacking openjdk-21-jre-headless:arm64 (21.0.3+9-1ubuntu1) ... 1311s Selecting previously unselected package default-jre-headless. 1312s Preparing to unpack .../5-default-jre-headless_2%3a1.21-75+exp1_arm64.deb ... 1312s Unpacking default-jre-headless (2:1.21-75+exp1) ... 1312s Selecting previously unselected package openjdk-21-jdk-headless:arm64. 1312s Preparing to unpack .../6-openjdk-21-jdk-headless_21.0.3+9-1ubuntu1_arm64.deb ... 1312s Unpacking openjdk-21-jdk-headless:arm64 (21.0.3+9-1ubuntu1) ... 1312s Selecting previously unselected package default-jdk-headless. 1312s Preparing to unpack .../7-default-jdk-headless_2%3a1.21-75+exp1_arm64.deb ... 1312s Unpacking default-jdk-headless (2:1.21-75+exp1) ... 1313s Selecting previously unselected package libssw-java. 1313s Preparing to unpack .../8-libssw-java_1.1-14build1_arm64.deb ... 1313s Unpacking libssw-java (1.1-14build1) ... 1313s Selecting previously unselected package autopkgtest-satdep. 1313s Preparing to unpack .../9-2-autopkgtest-satdep.deb ... 1313s Unpacking autopkgtest-satdep (0) ... 1313s Setting up liblcms2-2:arm64 (2.14-2build1) ... 1313s Setting up java-common (0.75+exp1) ... 1313s Setting up libssw-java (1.1-14build1) ... 1313s Setting up libpcsclite1:arm64 (2.2.3-1) ... 1314s Setting up ca-certificates-java (20240118) ... 1314s No JRE found. Skipping Java certificates setup. 1314s Setting up openjdk-21-jre-headless:arm64 (21.0.3+9-1ubuntu1) ... 1314s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/java to provide /usr/bin/java (java) in auto mode 1314s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 1314s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 1314s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 1314s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 1314s Processing triggers for libc-bin (2.39-0ubuntu9) ... 1314s Processing triggers for man-db (2.12.1-2) ... 1314s Processing triggers for ca-certificates-java (20240118) ... 1336s Adding debian:ACCVRAIZ1.pem 1336s Adding debian:AC_RAIZ_FNMT-RCM.pem 1337s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 1337s Adding debian:ANF_Secure_Server_Root_CA.pem 1337s Adding debian:Actalis_Authentication_Root_CA.pem 1337s Adding debian:AffirmTrust_Commercial.pem 1337s Adding debian:AffirmTrust_Networking.pem 1337s Adding debian:AffirmTrust_Premium.pem 1337s Adding debian:AffirmTrust_Premium_ECC.pem 1337s Adding debian:Amazon_Root_CA_1.pem 1337s Adding debian:Amazon_Root_CA_2.pem 1337s Adding debian:Amazon_Root_CA_3.pem 1337s Adding debian:Amazon_Root_CA_4.pem 1337s Adding debian:Atos_TrustedRoot_2011.pem 1337s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 1337s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 1337s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 1337s Adding debian:BJCA_Global_Root_CA1.pem 1337s Adding debian:BJCA_Global_Root_CA2.pem 1337s Adding debian:Baltimore_CyberTrust_Root.pem 1337s Adding debian:Buypass_Class_2_Root_CA.pem 1337s Adding debian:Buypass_Class_3_Root_CA.pem 1337s Adding debian:CA_Disig_Root_R2.pem 1337s Adding debian:CFCA_EV_ROOT.pem 1337s Adding debian:COMODO_Certification_Authority.pem 1337s Adding debian:COMODO_ECC_Certification_Authority.pem 1337s Adding debian:COMODO_RSA_Certification_Authority.pem 1337s Adding debian:Certainly_Root_E1.pem 1337s Adding debian:Certainly_Root_R1.pem 1337s Adding debian:Certigna.pem 1337s Adding debian:Certigna_Root_CA.pem 1337s Adding debian:Certum_EC-384_CA.pem 1337s Adding debian:Certum_Trusted_Network_CA.pem 1337s Adding debian:Certum_Trusted_Network_CA_2.pem 1337s Adding debian:Certum_Trusted_Root_CA.pem 1337s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 1337s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 1337s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 1337s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 1337s Adding debian:Comodo_AAA_Services_root.pem 1337s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 1337s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 1337s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 1337s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 1337s Adding debian:DigiCert_Assured_ID_Root_CA.pem 1337s Adding debian:DigiCert_Assured_ID_Root_G2.pem 1337s Adding debian:DigiCert_Assured_ID_Root_G3.pem 1337s Adding debian:DigiCert_Global_Root_CA.pem 1337s Adding debian:DigiCert_Global_Root_G2.pem 1337s Adding debian:DigiCert_Global_Root_G3.pem 1337s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 1337s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 1337s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 1337s Adding debian:DigiCert_Trusted_Root_G4.pem 1337s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 1337s Adding debian:Entrust_Root_Certification_Authority.pem 1337s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 1337s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 1337s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem 1337s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 1337s Adding debian:GLOBALTRUST_2020.pem 1337s Adding debian:GTS_Root_R1.pem 1338s Adding debian:GTS_Root_R2.pem 1338s Adding debian:GTS_Root_R3.pem 1338s Adding debian:GTS_Root_R4.pem 1338s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 1338s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 1338s Adding debian:GlobalSign_Root_CA.pem 1338s Adding debian:GlobalSign_Root_CA_-_R3.pem 1338s Adding debian:GlobalSign_Root_CA_-_R6.pem 1338s Adding debian:GlobalSign_Root_E46.pem 1338s Adding debian:GlobalSign_Root_R46.pem 1338s Adding debian:Go_Daddy_Class_2_CA.pem 1338s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 1338s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 1338s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 1338s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 1338s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 1338s Adding debian:HiPKI_Root_CA_-_G1.pem 1338s Adding debian:Hongkong_Post_Root_CA_3.pem 1338s Adding debian:ISRG_Root_X1.pem 1338s Adding debian:ISRG_Root_X2.pem 1338s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 1338s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 1338s Adding debian:Izenpe.com.pem 1338s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 1338s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 1338s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 1338s Adding debian:NAVER_Global_Root_Certification_Authority.pem 1338s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 1338s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 1338s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 1338s Adding debian:QuoVadis_Root_CA_1_G3.pem 1338s Adding debian:QuoVadis_Root_CA_2.pem 1338s Adding debian:QuoVadis_Root_CA_2_G3.pem 1338s Adding debian:QuoVadis_Root_CA_3.pem 1338s Adding debian:QuoVadis_Root_CA_3_G3.pem 1338s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 1338s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 1338s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 1338s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 1338s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 1338s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 1338s Adding debian:SZAFIR_ROOT_CA2.pem 1338s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 1338s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 1338s Adding debian:SecureSign_RootCA11.pem 1338s Adding debian:SecureTrust_CA.pem 1338s Adding debian:Secure_Global_CA.pem 1338s Adding debian:Security_Communication_ECC_RootCA1.pem 1338s Adding debian:Security_Communication_RootCA2.pem 1338s Adding debian:Security_Communication_RootCA3.pem 1338s Adding debian:Security_Communication_Root_CA.pem 1338s Adding debian:Starfield_Class_2_CA.pem 1338s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 1338s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 1338s Adding debian:SwissSign_Gold_CA_-_G2.pem 1338s Adding debian:SwissSign_Silver_CA_-_G2.pem 1338s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 1338s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 1338s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 1338s Adding debian:TWCA_Global_Root_CA.pem 1338s Adding debian:TWCA_Root_Certification_Authority.pem 1338s Adding debian:TeliaSonera_Root_CA_v1.pem 1338s Adding debian:Telia_Root_CA_v2.pem 1338s Adding debian:TrustAsia_Global_Root_CA_G3.pem 1339s Adding debian:TrustAsia_Global_Root_CA_G4.pem 1339s Adding debian:Trustwave_Global_Certification_Authority.pem 1339s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 1339s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 1339s Adding debian:TunTrust_Root_CA.pem 1339s Adding debian:UCA_Extended_Validation_Root.pem 1339s Adding debian:UCA_Global_G2_Root.pem 1339s Adding debian:USERTrust_ECC_Certification_Authority.pem 1339s Adding debian:USERTrust_RSA_Certification_Authority.pem 1339s Adding debian:XRamp_Global_CA_Root.pem 1339s Adding debian:certSIGN_ROOT_CA.pem 1339s Adding debian:certSIGN_Root_CA_G2.pem 1339s Adding debian:e-Szigno_Root_CA_2017.pem 1339s Adding debian:ePKI_Root_Certification_Authority.pem 1339s Adding debian:emSign_ECC_Root_CA_-_C3.pem 1339s Adding debian:emSign_ECC_Root_CA_-_G3.pem 1339s Adding debian:emSign_Root_CA_-_C1.pem 1339s Adding debian:emSign_Root_CA_-_G1.pem 1339s Adding debian:vTrus_ECC_Root_CA.pem 1339s Adding debian:vTrus_Root_CA.pem 1340s done. 1340s Setting up openjdk-21-jdk-headless:arm64 (21.0.3+9-1ubuntu1) ... 1340s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jar to provide /usr/bin/jar (jar) in auto mode 1340s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode 1340s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/javac to provide /usr/bin/javac (javac) in auto mode 1340s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode 1340s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/javap to provide /usr/bin/javap (javap) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jps to provide /usr/bin/jps (jps) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode 1341s update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode 1341s Setting up default-jre-headless (2:1.21-75+exp1) ... 1341s Setting up default-jdk-headless (2:1.21-75+exp1) ... 1341s Setting up autopkgtest-satdep (0) ... 1356s (Reading database ... 78750 files and directories currently installed.) 1356s Removing autopkgtest-satdep (0) ... 1367s autopkgtest [14:33:39]: test build-lib-java: [----------------------- 1383s Aligning nucleotides 1383s score1=21 score2=8 ref_begin1=8 ref_end1=21 read_begin1=0 read_end1=14 ref_end2=4 cigar=9M1I5M 1384s autopkgtest [14:33:56]: test build-lib-java: -----------------------] 1385s build-lib-java PASS 1385s autopkgtest [14:33:57]: test build-lib-java: - - - - - - - - - - results - - - - - - - - - - 1385s autopkgtest [14:33:57]: test run-example: preparing testbed 2245s autopkgtest [14:48:17]: testbed dpkg architecture: arm64 2245s autopkgtest [14:48:17]: testbed apt version: 2.9.3 2245s autopkgtest [14:48:17]: @@@@@@@@@@@@@@@@@@@@ test bed setup 2246s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [110 kB] 2247s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [39.2 kB] 2247s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [384 kB] 2247s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [2564 B] 2247s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [7052 B] 2247s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 Packages [71.4 kB] 2247s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/restricted arm64 Packages [33.3 kB] 2247s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/universe arm64 Packages [341 kB] 2247s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse arm64 Packages [7576 B] 2248s Fetched 996 kB in 2s (650 kB/s) 2248s Reading package lists... 2252s Reading package lists... 2253s Building dependency tree... 2253s Reading state information... 2254s Calculating upgrade... 2255s The following packages will be upgraded: 2255s libc-bin libc-dev-bin libc-devtools libc6 libc6-dev locales 2255s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 2255s Need to get 9244 kB of archives. 2255s After this operation, 0 B of additional disk space will be used. 2255s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 libc-devtools arm64 2.39-0ubuntu9 [27.8 kB] 2255s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 libc6-dev arm64 2.39-0ubuntu9 [1595 kB] 2256s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 libc-dev-bin arm64 2.39-0ubuntu9 [19.7 kB] 2256s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 libc6 arm64 2.39-0ubuntu9 [2776 kB] 2256s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 libc-bin arm64 2.39-0ubuntu9 [591 kB] 2256s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 locales all 2.39-0ubuntu9 [4235 kB] 2257s Preconfiguring packages ... 2258s Fetched 9244 kB in 1s (9663 kB/s) 2258s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78263 files and directories currently installed.) 2258s Preparing to unpack .../libc-devtools_2.39-0ubuntu9_arm64.deb ... 2258s Unpacking libc-devtools (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 2259s Preparing to unpack .../libc6-dev_2.39-0ubuntu9_arm64.deb ... 2259s Unpacking libc6-dev:arm64 (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 2259s Preparing to unpack .../libc-dev-bin_2.39-0ubuntu9_arm64.deb ... 2259s Unpacking libc-dev-bin (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 2259s Preparing to unpack .../libc6_2.39-0ubuntu9_arm64.deb ... 2259s Unpacking libc6:arm64 (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 2259s Setting up libc6:arm64 (2.39-0ubuntu9) ... 2260s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78263 files and directories currently installed.) 2260s Preparing to unpack .../libc-bin_2.39-0ubuntu9_arm64.deb ... 2260s Unpacking libc-bin (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 2260s Setting up libc-bin (2.39-0ubuntu9) ... 2261s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78263 files and directories currently installed.) 2261s Preparing to unpack .../locales_2.39-0ubuntu9_all.deb ... 2261s Unpacking locales (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 2261s Setting up locales (2.39-0ubuntu9) ... 2263s Generating locales (this might take a while)... 2269s en_US.UTF-8... done 2269s Generation complete. 2270s Setting up libc-dev-bin (2.39-0ubuntu9) ... 2270s Setting up libc-devtools (2.39-0ubuntu9) ... 2270s Setting up libc6-dev:arm64 (2.39-0ubuntu9) ... 2270s Processing triggers for man-db (2.12.1-2) ... 2275s Reading package lists... 2275s Building dependency tree... 2275s Reading state information... 2277s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 2280s Hit:1 http://ftpmaster.internal/ubuntu oracular InRelease 2280s Hit:2 http://ftpmaster.internal/ubuntu oracular-updates InRelease 2280s Hit:3 http://ftpmaster.internal/ubuntu oracular-security InRelease 2280s Hit:4 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 2284s Reading package lists... 2284s Reading package lists... 2285s Building dependency tree... 2285s Reading state information... 2287s Calculating upgrade... 2287s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 2288s Reading package lists... 2288s Building dependency tree... 2288s Reading state information... 2289s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 2296s Reading package lists... 2297s Building dependency tree... 2297s Reading state information... 2298s Starting pkgProblemResolver with broken count: 0 2299s Starting 2 pkgProblemResolver with broken count: 0 2299s Done 2300s The following additional packages will be installed: 2300s libssw0 ssw-align 2300s The following NEW packages will be installed: 2300s autopkgtest-satdep libssw0 ssw-align 2301s 0 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. 2301s Need to get 42.6 kB/43.3 kB of archives. 2301s After this operation, 169 kB of additional disk space will be used. 2301s Get:1 /tmp/autopkgtest.dYmFa3/3-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [708 B] 2302s Get:2 http://ftpmaster.internal/ubuntu oracular/universe arm64 libssw0 arm64 1.1-14build1 [21.4 kB] 2302s Get:3 http://ftpmaster.internal/ubuntu oracular/universe arm64 ssw-align arm64 1.1-14build1 [21.2 kB] 2305s Fetched 42.6 kB in 1s (32.5 kB/s) 2305s Selecting previously unselected package libssw0:arm64. 2305s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78263 files and directories currently installed.) 2305s Preparing to unpack .../libssw0_1.1-14build1_arm64.deb ... 2305s Unpacking libssw0:arm64 (1.1-14build1) ... 2305s Selecting previously unselected package ssw-align. 2306s Preparing to unpack .../ssw-align_1.1-14build1_arm64.deb ... 2306s Unpacking ssw-align (1.1-14build1) ... 2306s Selecting previously unselected package autopkgtest-satdep. 2306s Preparing to unpack .../3-autopkgtest-satdep.deb ... 2306s Unpacking autopkgtest-satdep (0) ... 2306s Setting up libssw0:arm64 (1.1-14build1) ... 2306s Setting up ssw-align (1.1-14build1) ... 2306s Setting up autopkgtest-satdep (0) ... 2306s Processing triggers for man-db (2.12.1-2) ... 2306s Processing triggers for libc-bin (2.39-0ubuntu9) ... 2314s (Reading database ... 78275 files and directories currently installed.) 2314s Removing autopkgtest-satdep (0) ... 2317s autopkgtest [14:49:29]: test run-example: [----------------------- 2317s target_name: chr1 2317s query_name: chr1 2317s optimal_alignment_score: 2002 suboptimal_alignment_score: 1000 strand: + target_begin: 1 target_end: 1001 query_begin: 1 query_end: 1001 2317s 2317s Target: 1 TAAACAGGTTAATCGCCACGACATAGTAGTATTTAGAGTTACTAGTAAGCCTGATGCCAC 60 2317s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2317s Query: 1 TAAACAGGTTAATCGCCACGACATAGTAGTATTTAGAGTTACTAGTAAGCCTGATGCCAC 60 2317s 2317s Target: 61 TACACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 2317s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2317s Query: 61 TACACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 2317s 2317s Target: 121 AAACATAGGAAAAAATTATTTAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTTA 180 2317s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2317s Query: 121 AAACATAGGAAAAAATTATTTAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTTA 180 2317s 2317s Target: 181 TAAGAGTGTTTTCCTATTGTTTTCAGTGTAGGACTCACTGTTCTAAATAACTGGGACACC 240 2317s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2317s Query: 181 TAAGAGTGTTTTCCTATTGTTTTCAGTGTAGGACTCACTGTTCTAAATAACTGGGACACC 240 2317s 2317s Target: 241 CAAGGATTCTGTAAAATGCCATCCAGTTATCATTTATATTCCCTAACTCAAAATTCATTC 300 2317s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2317s Query: 241 CAAGGATTCTGTAAAATGCCATCCAGTTATCATTTATATTCCCTAACTCAAAATTCATTC 300 2317s 2317s Target: 301 ACATGTATTCATTTTTTTCTAAACAAATTAGCATGTAGAATTCTGGTTAAAATTTGGCAT 360 2317s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2317s Query: 301 ACATGTATTCATTTTTTTCTAAACAAATTAGCATGTAGAATTCTGGTTAAAATTTGGCAT 360 2317s 2317s Target: 361 AGAACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGAATG 420 2317s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2317s Query: 361 AGAACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGAATG 420 2317s 2317s Target: 421 GTGATTTAACAAAGGATAATAAAGTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC 480 2317s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2317s Query: 421 GTGATTTAACAAAGGATAATAAAGTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC 480 2317s 2317s Target: 481 TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGAGAGAAAATTTCACT 540 2317s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2317s Query: 481 TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGAGAGAAAATTTCACT 540 2317s 2317s Target: 541 CCCTCCATAAATCTCACAGTATTCTTTTCTTTTTCCTTTCCTTTCCTTGCTCTTCTTTCT 600 2317s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2317s Query: 541 CCCTCCATAAATCTCACAGTATTCTTTTCTTTTTCCTTTCCTTTCCTTGCTCTTCTTTCT 600 2317s 2317s Target: 601 CTCCTATTGCTTTCCTTTCATTTCCTTCTCATAAAAGAAAAATAACAATATAGAAAATAA 660 2317s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2317s Query: 601 CTCCTATTGCTTTCCTTTCATTTCCTTCTCATAAAAGAAAAATAACAATATAGAAAATAA 660 2317s 2317s Target: 661 CAAAATATAGATGGTCAACCTTTTTAATATTAAGGTTACCTAAAATGCCATTATCCAAAG 720 2317s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2317s Query: 661 CAAAATATAGATGGTCAACCTTTTTAATATTAAGGTTACCTAAAATGCCATTATCCAAAG 720 2317s 2317s Target: 721 TGGTTCTCTAGAGATGCTGATGTATATACTTACATATTTTACAGTGTATTCAAATAAAGA 780 2317s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2317s Query: 721 TGGTTCTCTAGAGATGCTGATGTATATACTTACATATTTTACAGTGTATTCAAATAAAGA 780 2317s 2317s Target: 781 GTATATTACATAAGACATATCCTTTTGTAACCAACTTTTGTCATTAACAATTTACTGGAC 840 2317s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2317s Query: 781 GTATATTACATAAGACATATCCTTTTGTAACCAACTTTTGTCATTAACAATTTACTGGAC 840 2317s 2317s Target: 841 TTGTCAACAAACCTAAATCTGTATCGTCTATAATGGCTACGTTCATTTTGGTATGAATCT 900 2317s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2317s Query: 841 TTGTCAACAAACCTAAATCTGTATCGTCTATAATGGCTACGTTCATTTTGGTATGAATCT 900 2317s 2321s Target: 901 TAATTACCCCTTTCTGCATTATTTAATGATTTTCTCATATGTCACTCTTAAATGTACTTC 960 2321s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2321s Query: 901 TAATTACCCCTTTCTGCATTATTTAATGATTTTCTCATATGTCACTCTTAAATGTACTTC 960 2321s 2321s Target: 961 TAATTTTTCACTTTACATCACATAATGAATGGATCCAAATA 1001 2321s ||||||||||||||||||||||||||||||||||||||||| 2321s Query: 961 TAATTTTTCACTTTACATCACATAATGAATGGATCCAAATA 1001 2321s 2321s target_name: chr2 2321s query_name: chr1 2321s optimal_alignment_score: 312 suboptimal_alignment_score: 311 strand: + target_begin: 4437430 target_end: 4438470 query_begin: 9 query_end: 971 2321s 2321s Target: 4437430 TTGAT-TCCACAGATTCCAATAGAATAGTTTGAAGATGGAACAATTGAGAATTCTGAATG 4437488 2321s ||*|| *|||| || | |||| ||||*|**||| |**||*|*| ||**||| ||| 2321s Query: 9 TTAATCGCCAC-GA--C--ATAG--TAGTATTTAGA-GTTACTAGT---AAGCCTG-ATG 56 2321s 2321s Target: 4437489 ---CTAAGCTAAT--TAGATATGTTTTCTTTGAAGGAAAACTACATTGTATTATTTTGCC 4437543 2321s |||**| ||| |||*| | ||*||||| |||| | *|||||*|*|||**| 2321s Query: 57 CCACTACAC-AATTCTAGCT-T-TTCTCTTT--AGGA----T-GATTGTTTCATTCAG-- 104 2321s 2321s Target: 4437544 TCCTCCCTCCTCCTAGAAGCCTT----TAAAATTCATGCATCATTTTAAAAGTTTTGAAA 4437599 2321s ||*|**|| ||**|||||**|*| *|||||| || *|*||**||||| ||| || 2321s Query: 105 TCTTATCT-CTTTTAGAAAACATAGGAAAAAATT-AT--TTAATAATAAAA-TTT--AA- 156 2321s 2321s Target: 4437600 TTTTTCAAGATTATGTTTAA-GTAT--ATTA-AATATTTTGTTCAGTCATCCCAATTAGT 4437655 2321s ||**||| | ||| || |||| *||| ||*| *|||| |*||*||| || 2321s Query: 157 -TTGGCAA-A--ATG---AAGGTATGGCTTATAAGA--GTGTT------TTCCTATT-GT 200 2321s 2321s Target: 4437656 TTTCAATG--G----CCCT-TTCCATTTAAAGAGTTTGGACATTCCATATAAAAAAG-AC 4437707 2321s |||||*|| | |*|| ||| ||||*|**|*||||| *||| |**|****| |* 2321s Query: 201 TTTCAGTGTAGGACTCACTGTTC----TAAATAACTGGGACA-CCCA-AGGATTCTGTAA 254 2321s 2321s Target: 4437708 AATGTCATCTACA-TTTTC-TTTGTTTT--CT---T---AATT-AT----ATCTTTTCCT 4437752 2321s ||||*|||| || ||*|| |||*|*|| || | |||| || ||*|*|||*| 2321s Query: 255 AATGCCATC--CAGTTATCATTTATATTCCCTAACTCAAAATTCATTCACATGTATTCAT 312 2321s 2321s Target: 4437753 TTTTACAAATTTCTTAA-AAA-TAG-GTGTAAGATCTCTGATTTAACCTATGTGCGT--- 4437806 2321s ||| |||||*|| ||| ||| *||| |||**|||| *||||**|*|| ||*| 2321s Query: 313 TTT------TTTCTAAACAAATTAGCATGT-AGAATTCTG-GTTAAAATTTG-GCATAGA 363 2321s 2321s Target: 4437807 -C------TTAATTTTTCA----GCTTC---T--CTGTCATT---TTATT-AGATGTTTT 4437846 2321s | *||*||||||| ||**| | |||||||| |*||| ||| 2321s Query: 364 ACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGA------ 417 2321s 2321s Target: 4437847 TATTGT-TTTTAA------TTACTAAATTAATCTTAATCTATG-CTTATTATATCATTCT 4437898 2321s ||*|| *||||| *||*||||*|*|| **||*|*||| |**|**|*|||**||| 2321s Query: 418 -ATGGTGATTTAACAAAGGATAATAAAGTTAT-GAAACCAATGCCACAAAACATCTGTCT 475 2321s 2321s Target: 4437899 CCATTAC--GT-TATGGATACAACAACT-TG-GTGAATGTTTCTG----AGATTAACACT 4437949 2321s | |*|| || |*||**| *| || |||**|||*|*|| |||***|*|** 2321s Query: 476 C--TAACTGGTGTGTGTGT-------GTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGA 526 2321s 2321s Target: 4437950 AAAAATATTTAACAATCTCTCTCATTTTTATC----TTTTC-TTTCTTTTTCTCTTTGTC 4438004 2321s *|*||*|||| ||*||*||| |||***|*|| |*||| |||||||||| |||| *| 2321s Query: 527 GAGAAAATTT--CACTCCCTC-CATAAATCTCACAGTATTCTTTTCTTTTTC-CTTT-CC 581 2321s 2321s Target: 4438005 TTT-CTCACTCTCTATTTATCCTGTTACATCTTTGCTTCTATCTCTTTCTCTGTTTTTTT 4438063 2321s ||| ||**|||| |*|||*| ||**|| |||||| || ||||| *|||**|| 2321s Query: 582 TTTCCTTGCTCT-TCTTTCT-CTCCTA-----TTGCTT---TC-CTTTC---ATTTCCTT 627 2321s 2321s Target: 4438064 TTTTTAATATTTAAATAATGCTTCTGTCTGAGGAGGTTAAGAAGTGAAAGAAGACATTGT 4438123 2321s *|**|||*|***|||||| |**|*| || || || | ||*||*|*|| 2321s Query: 628 CTCATAAAAGAAAAATAA-----CAATAT-AG------AA-AA-T--AACAAAATAT--- 668 2321s 2321s Target: 4438124 GAGATGGAGAATCTTTATTAAGATAGAAG---AC--AAAGAGGGGATGAT-----GTGGA 4438173 2322s ||||||**||*|||| ||||*|| *||| || ||| |*|**||*|| |||| 2322s Query: 669 -AGATGGTCAACCTTT-TTAATAT-TAAGGTTACCTAAA-ATGCCATTATCCAAAGTGG- 723 2322s 2322s Target: 4438174 CACTT-TC-AG-GATG-TGGAATGGT---TACATACATTATT---CTGT-TA-TCACAAG 4438221 2322s || || || |||| || || || |||*|||| |||| |*|| || ||| || 2322s Query: 724 ---TTCTCTAGAGATGCTG--AT-GTATATACTTACA-TATTTTACAGTGTATTCA-AA- 774 2322s 2322s Target: 4438222 GTTAGCTAA-ACTCTCTTTCATAA-A-ATCTCTCTTGTTTCTTACTCCCTAAATCTCAAA 4438278 2322s || || |*|*|*||*||||| | ||*|| || |||*|*|| | || || 2322s Query: 775 --TA---AAGAGTATATTACATAAGACATATC-CT--TTTGTAAC-C---AA--CT---- 816 2322s 2322s Target: 4438279 TAAGTGACTAAAAAATGCCTGGA--TGACCCCAAACAGTAAGAATAGCTTGTA-GGTCTC 4438335 2322s |**||*|*|||*||*|**||||| ||*|**||||| *|| ||| | |||| *||||* 2322s Query: 817 TTTGTCATTAACAATTTACTGGACTTGTCAACAAAC-CTA--AAT--C-TGTATCGTCTA 870 2322s 2322s Target: 4438336 TGAAG---ATGTTATCTTTTGCCCTGGGAAGGTGGATTCCTATACTAACACCTGCACTTG 4438392 2322s |*|*| |*|| ||*||| |||*| ||*|| || ||*|*||*||| || 2322s Query: 871 TAATGGCTACGT--TCATTT----TGGTA---TGAAT--CT-TAATTACCCCT----TT- 913 2322s 2322s Target: 4438393 AAAAGGTGAACAAGATAATTTTGTATTTATTTTCTCACTA--CCACTGCAGGTAGCATGG 4438450 2322s *|| | ||*||| ||*|*||||||||| || *|||| | *|| *||| 2322s Query: 914 -----CTG--C---ATTATT---TAATGATTTTCTCA-TATGTCACT-C--TTA-AATG- 954 2322s 2322s Target: 4438451 GACACTTCTTTATTATTCAC 4438470 2322s *||||| |*|||*||||| 2322s Query: 955 --TACTTC-TAATTTTTCAC 971 2322s 2322s target_name: chr3 2322s query_name: chr1 2322s optimal_alignment_score: 291 suboptimal_alignment_score: 289 strand: + target_begin: 680970 target_end: 682002 query_begin: 9 query_end: 998 2322s 2322s Target: 680970 TTAAATTGTCA--ACATGGTA-TATATGAAATGAATTGGGTTTATAATAGTAAACCAATC 681026 2322s || |||*|*|| ||||*||| ||| |*| || || ||*||||||*|| |* 2322s Query: 9 TT-AATCGCCACGACATAGTAGTAT-TTA---GA-----GT---TACTAGTAAGCC--TG 53 2322s 2322s Target: 681027 TTG-CATTCCTAAAA---TA--AATCCTATTTAG--TTATCGT--------GTGTTATTT 681070 2322s *|| ||*|*| |*|| || **|*||*||||| |*||*|| ||*||| |* 2322s Query: 54 ATGCCACTAC-ACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTA-TC 111 2322s 2322s Target: 681071 TCTT----AATACAGTGTTGGATTAAGTTTGCTATTTTTTATTTTAAAATTTTACATTAT 681126 2322s |||| ||*||| |*|||**||*| || |||*||**||||| |||| || 2322s Query: 112 TCTTTTAGAAAACA---TAGGAAAAAAT----TA--TTTAATAATAAAA-TTTA----AT 157 2322s 2322s Target: 681127 TTTCTTCAGTGA---TATTGACCTGT---AGTTTTCTTTCATTATACTGTTTTATCAGAT 681180 2322s |**| **|*||| || ||*|*|*| |||*| |||| *||| ||||| |||| | 2322s Query: 158 TGGC-AAAATGAAGGTA-TGGCTTATAAGAGTGT--TTTC-CTAT--TGTTT--TCAG-T 207 2322s 2322s Target: 681181 TTAGGTATCAGTGTTAT-AGTTTCT---TCATGAAAGGAAT---TAAGATGTTTTCCTTC 681233 2322s *||||**|||*||||*| |*|**|| *||***|||||*| |||*||| ||*|| 2322s Query: 208 GTAGGACTCACTGTTCTAAATAACTGGGACACCCAAGGATTCTGTAAAATG----CCATC 263 2322s 2322s Target: 681234 C-CTT-TCA---ATGTT------CTGAATAATCATACAGCAT-TA-TGACTATCTGCCAT 681280 2322s | *|| ||| ||*|| ||*||*|*||||*|| ||| || |*|*|*|*| | 2322s Query: 264 CAGTTATCATTTATATTCCCTAACTCAAAATTCATTCA-CATGTATTCATTTTTT----T 318 2322s 2322s Target: 681281 TTAAATC--TTTAGAAT----AATTACCTTGTGAAACTATGTGGGCTTGGTGCTATTTTG 681334 2322s *|||| | *||||*|| |||| ||*||*||| || |*|||*|*|**| | ***| 2322s Query: 319 CTAAA-CAAATTAGCATGTAGAATT--CTGGTTAAA--AT-TTGGCATAGAAC-A-CCCG 370 2322s 2322s Target: 681335 TGTAGTATTTATC-TAATTGTTTCCTATA--TTTC-TT--CTA--TGAAATTGGTTGATT 681386 2322s *||| | |||*|| ||| ||***||*||| |*|| || ||| |||*|*||| ||||| 2322s Query: 371 GGTA-T-TTTTTCATAA-TGCACCCAATAACTGTCATTCACTAATTGAGAATGG-TGATT 426 2322s 2322s Target: 681387 TAATCTTTCTAACACTAATAAGATTAATTTGAGTAAACTTCATTTCTCTAGAAAATAATT 681446 2322s ||| |*||***||||||**||| || |||| ||*|*| | |*||||*| | 2322s Query: 427 TAA-----CAAAGGATAATAAAGTTA---TG---AAAC--CAATGC-C-ACAAAACA--T 469 2322s 2322s Target: 681447 AATTCATCAAATTAAATCAAATTTGAAATTTGATTTCAAATTTATTTGTGTCAAAGTAA- 681505 2322s ***|| || |||*|****|*|| |*|| |*| *|*|*|*|||||****|||| 2322s Query: 470 CTGTC-TC----TAACTGGTGTGTG---TGTG-TGT---GTGTGTGTGTGTGTGTGTAAG 517 2322s 2322s Target: 681506 A-GGAG-G--------TTTC-CT--GT-CATTTTAAAATTCTC----TGTTGTTTTAATA 681547 2322s | |||| | |||| || *| || |||| |||| |*||*|||| *|* 2322s Query: 518 AGGGAGAGAGAGAAAATTTCACTCCCTCCA---TAAA--TCTCACAGTATTCTTTT-CTT 571 2322s 2322s Target: 681548 GTAACTT--GTTT-CTTATTATTTATAACTTTAT---ATATT--TGTACTT---TTTCCT 681596 2322s *|**||| *||| |||**|*|| ||||*| *|||| |*|*||| ||||| 2322s Query: 572 TTTCCTTTCCTTTCCTTGCTCTT-----CTTTCTCTCCTATTGCTTTCCTTTCATTTCC- 625 2322s 2322s Target: 681597 TTTTTATCAAATG--AACT--GAGTTT------TAAC-----ATCGCAT--TTAA---TT 681636 2322s ||*|*|| |||*| ||*| *|*|*| |||| ||*| || |*|| || 2322s Query: 626 TTCTCAT-AAAAGAAAAATAACAATATAGAAAATAACAAAATATAG-ATGGTCAACCTTT 683 2322s 2322s Target: 681637 TTAATTATCTAATCTAAATCTAAAAGCTGATATTTGATTCAA-----TTGTC-AGAAATC 681690 2322s |||| ||| |||**| *|*|||||| ||**||| ||*||| ||*|| |||*|| 2322s Query: 684 TTAA-TAT-TAAGGT-TACCTAAAA--TGCCATT--ATCCAAAGTGGTTCTCTAGAGAT- 735 2322s 2322s Target: 681691 TCTTAAGTATATTGGGATCAACTTGGAAAAGTAAATTGACTTTAAACAGTACACTT--TA 681748 2322s *||*|*|||||| |||| |*| | ||| || |||||**| || *| 2322s Query: 736 GCTGATGTATAT--------ACTT--ACA--T--ATT---TT---ACAGTGTA-TTCAAA 774 2322s 2322s Target: 681749 TGAACTTTAAATTACAGATCAGATAT--TTTTAGTAA--AA-TTTTATCCAAACTAAGAT 681803 2322s |*||***||*||||||*|**|*|||| |||| |||| || ||||*|| |*||| 2322s Query: 775 TAAAGAGTATATTACATAAGACATATCCTTTT-GTAACCAACTTTTGTC---ATTAA--- 827 2322s 2322s Target: 681804 GCAATATGAGTATAATCACTGATTCAA-AAAGCTTCCTTTAGTGAGCATGAAATATC-TC 681861 2322s |||| |*|*|**|*| || |||| ||| || || *|*| || |||| | 2322s Query: 828 -CAAT-TTACTGGACT---TG--TCAACAAA----CC--TA--AATC-TG---TATCGT- 867 2322s 2322s Target: 681862 ACTATTTTAAT---T---TTAATATTGATTGTGTGTTAAAATAATAATAATTGCATTAT- 681914 2322s ||| |||| | ||*||*||| ||*|| |||**||||*|***|*||*| 2322s Query: 868 -CTA---TAATGGCTACGTTCATTTTG---GTATG----AATCTTAATTACCCCTTTCTG 916 2322s 2322s Target: 681915 -ATTATTGATAATGTGTATTCTTGTCATGTTTCCATTCTTACTGGAAATG--CCTCCAGT 681971 2322s |||||| ||||| ||| ||*||||*|*| ||*|||| ||||| |*||*|*| 2322s Query: 917 CATTATT--TAATG---ATT-TTCTCATATGT-CACTCTT-----AAATGTACTTCTAAT 964 2322s 2322s Target: 681972 GTTTC----TCCATCAAATAGTAT-ACTGGCTCTAA 682002 2322s *|||| |*|||||*||| || |*|||*||*|| 2322s Query: 965 TTTTCACTTTACATCACATA--ATGAATGGATCCAA 998 2322s 2322s target_name: chr4 2322s query_name: chr1 2322s optimal_alignment_score: 280 suboptimal_alignment_score: 273 strand: + target_begin: 47000 target_end: 48059 query_begin: 2 query_end: 1001 2322s 2322s Target: 47000 AAACATCTT-ATAGCTACTGGATTCTTTTTTGCCTATGTATTTA----TA-TATGT--G- 47050 2322s |||||**|| ||*||*|| || | *|*| || ||||||| || || || | 2322s Query: 2 AAACAGGTTAATCGCCAC--GA--C---ATAG--TA-GTATTTAGAGTTACTA-GTAAGC 50 2322s 2322s Target: 47051 CTGTAT----CTATGTAATGTCTA--TTTTTATAAAGCTCTAATTGACCTAGAGGAAAAT 47104 2322s ||| || |||***||| |||| |||| |||| || ||| || 2322s Query: 51 CTG-ATGCCACTACACAAT-TCTAGCTTTT-------CTCT--TT-------AGG---AT 89 2322s 2322s Target: 47105 GA--GTTT--TTGAATCAAATAT-TTTTTGAAGGGAAAGTAAAAACTGTGGTACATTGAA 47159 2322s || |||| ||*|*||**||*| ||||*|||***|*||*||||| ||| | 2322s Query: 90 GATTGTTTCATTCAGTCTTATCTCTTTTAGAAAACATAGGAAAAA---------ATT-A- 138 2322s 2322s Target: 47160 GTTCACATGACTAATCATTGAGAAATAAAAACAGACTTAGCAATTATTGGTAAAAAGCAG 47219 2322s || |||| ||||||| || |*|||||*||||*|*|| 2322s Query: 139 -TT--------TAAT--------AATAAAA------TT-----TAATTGGCAAAATGAAG 170 2322s 2322s Target: 47220 --ATG--TTAAAA-----TATAC--ATTTTTGTTCAGGGTTAAAGGA-T---TGTTCTGA 47264 2322s ||| |||*|| |*|*| |||*|| |||||*|| |||| | ||||||*| 2322s Query: 171 GTATGGCTTATAAGAGTGTTTTCCTATTGTT-TTCAGTGT---AGGACTCACTGTTCTAA 226 2322s 2322s Target: 47265 ATTA----GATA---A--GATAAAGCTAAAAGTTTAAACAAGTTATAA---AAAGTTTCT 47312 2322s ||*| ||*| | |||***| ||||| |***|*|*||||||*| |*|*|**|| 2322s Query: 227 ATAACTGGGACACCCAAGGATTCTG-TAAAA-TGCCATCCAGTTATCATTTATATTCCCT 284 2322s 2322s Target: 47313 A--T-AAAATTCATCTTGCCA-AAGAA---ATTTTGTCCATGAACATTAAATTACGAAAG 47365 2322s | | ||||||||| | || |*|*| |||||*|*| |*||| |||||| |*|*| 2322s Query: 285 AACTCAAAATTCAT-T---CACATGTATTCATTTTTTTC-TAAAC---AAATTA-GCATG 335 2322s 2322s Target: 47366 GTATTATATGTTTTTTTGGT--AAATTAAGCATTTAAATAATAGCACAACAAGGTA---- 47419 2322s ||*| *||*|||| |||||**|| ||||*|||*|**|||| 2322s Query: 336 ----TAGA----ATTCTGGTTAAAATTTGGC---------ATAGAACACCCGGGTATTTT 378 2322s 2322s Target: 47420 CTCTTAAGGCAC----TAATCTGCTCTTTAGCAAAATTTGTAAA--GTG--TTATAAACG 47471 2322s *||*|||*|||| ||| ||| ||*|| ||**|*|||**|| ||| |||**||*| 2322s Query: 379 TTCATAATGCACCCAATAA-CTG-TCATT--CACTAATTGAGAATGGTGATTTAACAAAG 434 2322s 2322s Target: 47472 GGTTTTACTTTTGTAAATTTTTTGAAACAATTGTGGCAAAA------TAAATAACATGGT 47525 2322s | | |**|||| *||*||||||*|*||***||||| |***|||| |||| 2322s Query: 435 G-----A---TAATAAA-GTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC-TGGT 484 2322s 2322s Target: 47526 AATCTG-GAAT-TCTATTTCATAACATCAAGTGT-TTTAA-------ACCTCTAACATTT 47575 2322s *|*|| |**| |*|*|*| *| *| |||| |*||| |*****||*|||| 2322s Query: 485 -GTGTGTGTGTGTGTGTGT-GT---GT---GTGTGTGTAAGAGGGAGAGAGAGAAAATTT 536 2322s 2322s Target: 47576 C-TTC---CCA-AAATCAAAC----TTCAGTTTCAAAATTGT--CTTTCCT---CGTGC- 47620 2322s | *|| ||| |||||**|| ||| *|||| ||*| ||||||| |*||| 2322s Query: 537 CACTCCCTCCATAAATCTCACAGTATTC-TTTTC----TTTTTCCTTTCCTTTCCTTGCT 591 2322s 2322s Target: 47621 CTGACTTT-TGAATGCTACAGAGGGC---CCCTGGAGTATCC-------AAAAGAGAGGT 47669 2322s || *|||| | || |**|**|| ||*|**| |*||| ||||||*|**| 2322s Query: 592 CT-TCTTTCT-----CT-CCTATTGCTTTCCTTTCA-TTTCCTTCTCATAAAAGAAAAAT 643 2322s 2322s Target: 47670 AAACTGGATTATTTGACATATTTAGTTACATGGGATTGCCAATCTTCTTTAGGTTATAT- 47728 2322s ||| |*|||***|*|||***|**||*| |||*|*|||*||| |||| |||| 2322s Query: 644 -AAC---AATATAGAAAATAACAAAATATA---GATGGTCAACCTT-TTTA----ATATT 691 2322s 2322s Target: 47729 -AGGTTA--TATTTTG--AT-----AAA-T-ATTCTATAGGTTATATTTTGATAAATGAT 47776 2322s |||||| ||***|| || ||| | *||||*||| |*||**||||**|| || 2322s Query: 692 AAGGTTACCTAAAATGCCATTATCCAAAGTGGTTCTCTAG---AGATGCTGATGTAT-AT 747 2322s 2322s Target: 47777 ACTAATATATGTTCCAAAATTGTATGAGATTTCTAATGTCTGAGTATATGCTATCAAAAT 47836 2322s |||*|*||||*|| |*|*|||| |||*||| ***|||||||| || || 2322s Query: 748 ACTTACATATTTT---ACAGTGTA------TTCAAAT-AAAGAGTATAT--TA-CA---- 790 2322s 2322s Target: 47837 TAAG--GTTT--TTATGT---TAAGTTATTGT-A--AAC----CACAGAGA-TT---ATC 47878 2322s |||| *|*| ||*||| *||*|| |||| | ||| *||*| || || |*| 2322s Query: 791 TAAGACATATCCTTTTGTAACCAACTT-TTGTCATTAACAATTTACTG-GACTTGTCAAC 848 2322s 2322s Target: 47879 AAACTTCTTTGTCAACTGTGTTTCTGACTATAA---CTACCCTGGACATTTTGTTATTCA 47935 2322s |||| || ||*|*|||*|| |*|||||| |||| |**|||||||*||| 2322s Query: 849 AAAC--CT-----AAATCTGTATC-GTCTATAATGGCTAC---GTTCATTTTGGTAT--- 894 2322s 2322s Target: 47936 AAGACAATTGTCTTGTTTAGATCCTTTTCAAGAGATAGTTTATAAGA--AGCTACAGAAC 47993 2322s || | ||||**|| |*||*|||| *| *||**|||| |*|| **|| ||*| 2322s Query: 895 --GA-A----TCTTAATT--ACCCCTTTC-TG-CATTATTTA-ATGATTTTCT-CATA-- 939 2322s 2322s Target: 47994 TGTGACAGGTGCTCTCAAATGCAGTTTTCCAA---ATAACTTTGGAGATCATGACAT--T 48048 2322s ||| || ||||*|||||*| *|||*|| *|*||||| | |||*|||| | 2322s Query: 940 TGT--CA----CTCTTAAATGTA--CTTCTAATTTTTCACTTT--A---CACPU time: 4.288966 seconds 2322s TCACATAAT 986 2322s 2322s Target: 48049 GAA---AT--AAAGTA 48059 2322s ||| || ||| || 2322s Query: 987 GAATGGATCCAAA-TA 1001 2322s 2322s target_name: chr5 2322s query_name: chr1 2322s optimal_alignment_score: 230 suboptimal_alignment_score: 199 strand: + target_begin: 8806 target_end: 9723 query_begin: 11 query_end: 974 2322s 2322s Target: 8806 AATGGCCAGGGCACTGAGGAG-CTGTGGAAGAACTGGGGAAATCACCGAAACCCAGTAC- 8863 2322s |||*||||*|*|| | ||*|| *|*|*||***||| *|*||*| |*| |**|||*||| 2322s Query: 11 AATCGCCACGACA-T-AGTAGTATTTAGAGTTACT--AGTAAGC-CTG-ATGCCACTACA 64 2322s 2322s Target: 8864 CATTTCAGTGAGGCCATTCTC--CA--AAAACTCTCTC---CA-TCTTATTTCTT---G- 8911 2322s ||*||| | | ||**||||| *| |**|*|*|*|| || ||||||*|||| | 2322s Query: 65 CAATTC--T-A-GCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 2322s 2322s Target: 8912 ------GGGAAAGAGTTCTTCTACT--TACAATATGAT---CAACCTGA--TTAAG---A 8955 2322s *|||||*|*||*|| ||*| ||*|||*|*|| |||**||| *||*| * 2322s Query: 121 AAACATAGGAAAAAATTATT-TAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTT 179 2322s 2322s Target: 8956 AT-ATATTGGTTT-CTATAACTGTGATGCAGATTATAACTATACAAATGCCAATTACCAG 9013 2322s || |*|*||*||| |||| ||| *|*|||**||**||| | |*|| || |*|* 2322s Query: 180 ATAAGAGTGTTTTCCTAT---TGT-TTTCAGTGTAGGACT---C-ACTG----TT-CTAA 226 2322s 2322s Target: 9014 A-AGCTAAGCCACCC--TGATTC--CAAAAT---AT--AGTCTCACATTTCATGGTTTCC 9063 2322s | |*||**|*||||| *||||| *||||| || ||| |**||||| || *|||| 2322s Query: 227 ATAACTGGGACACCCAAGGATTCTGTAAAATGCCATCCAGT-TATCATTT-AT--ATTCC 282 2322s 2322s Target: 9064 TGGTA--TCAGAAATCCCTATGAGCCTG-A--GATTTTTTCCCTTAA-------AGCA-- 9109 2322s *|| ||| ||||*|*| |*| |*|| | *|||||||*| ||| |||| 2322s Query: 283 --CTAACTCA-AAATTCAT-TCA-CATGTATTCATTTTTTTC--TAAACAAATTAGCATG 335 2322s 2322s Target: 9110 ---AATACTG---AAGAT-----A-AGAA-ACC----AATTAATTTCATTGTTGC----- 9147 2322s |||*||| ||*|| | |||| ||| *||| *||||| |**||| 2322s Query: 336 TAGAATTCTGGTTAAAATTTGGCATAGAACACCCGGGTATT-TTTTCA-TAATGCACCCA 393 2322s 2322s Target: 9148 -TATCTTGT-AT---CCAATGGCATAA----AATCTATACTAACTTGATTAGAAA-TTCT 9197 2322s ||*| ||| || |*|||*| |*|| *||*|| ||*|| *|||*|*||| ||*| 2322s Query: 394 ATAAC-TGTCATTCACTAATTG-AGAATGGTGATTTA-ACAAA--GGATAATAAAGTTAT 448 2322s 2322s Target: 9198 G---CCAATG------AACAACT-T---TA--T--TGT-TTTGAGTGATG---------- 9229 2322s | |||||| ||||*|| | || | ||| |*||*||| || 2322s Query: 449 GAAACCAATGCCACAAAACATCTGTCTCTAACTGGTGTGTGTGTGTG-TGTGTGTGTGTG 507 2322s 2322s Target: 9230 -------AAGCCCCATTTGAGA-ATATAGGCTCAATGGCCTTGC-----TCT-----TA- 9270 2322s |||****| |||| |*|*|***|||*| ||*|*| ||| || 2322s Query: 508 TGTGTGTAAGAGGGA---GAGAGAGAAAATTTCACT--CCCTCCATAAATCTCACAGTAT 562 2322s 2322s Target: 9271 ACTGTTCTCTATGCAGTCACTTTCTTCTGCACTAAAGTGCCAATACAGATACTG-AATAC 9329 2322s *||*||||*|*|*|**|| |||||*| |||*|| **|**|**|*| ||*|| **|*| 2322s Query: 563 TCTTTTCTTTTTCCTTTC-CTTTCCT-TGCTCT--TCTTTCTCTCC---TATTGCTTTCC 615 2322s 2322s Target: 9330 ATTGATTTAAAT-ACATAGATATATAAATA--GATAT-TTAAATATGC--AATATATATG 9383 2322s *||*||||***| *|||| |*|*|*||||| *|||| **||||| *| ||||||*||| 2322s Query: 616 TTTCATTTCCTTCTCATA-AAAGAAAAATAACAATATAGAAAATA-ACAAAATATAGATG 673 2322s 2322s Target: 9384 G--ATAC---TTTATATATT--GATT---TAAA----CATTTTCC--------TCTCATA 9421 2322s | | || |||| ||||| |*|| |||| ||||*||| |||| || 2322s Query: 674 GTCA-ACCTTTTTA-ATATTAAGGTTACCTAAAATGCCATTATCCAAAGTGGTTCTC-TA 730 2322s 2322s Target: 9422 GA-----TGA--AAAATCACTCTAACATGTATTGATGGCTTCACA-AGAAATCATTTACA 9473 2322s || ||| *|*|| ||| | ||| |||| || ||| *|*|*|||**||*| 2322s Query: 731 GAGATGCTGATGTATAT-ACT-T-ACA--TATT------TT-ACAGTGTATTCAAATAAA 778 2322s 2322s Target: 9474 GAAAATAATTGCATATGATACAGT--GTTTGTGCCAAAATGTATTCATGGCTTTAAAAAC 9531 2322s ||**|| |||*||||*||*|*| | *|||||**|*||*| || ||*|*||||*|| 2322s Query: 779 GAGTAT-ATTACATAAGACATA-TCCTTTTGTAACCAACT---TT--TGTCATTAACAA- 830 2322s 2322s Target: 9532 TTCAGTGGAAATGTCTATTCAGATCCCTAGCCCATTGTTAAATTGGTTTCTGTTTTCTTG 9591 2322s ||*|*||||**||||*| || |*|| |||||**||*|| | ||| 2322s Query: 831 TTTACTGGACTTGTCAA--CA-AACC------------TAAATCTGTATC-G---TCT-- 869 2322s 2322s Target: 9592 CTAAGTTTGAGCTGC-TTATAGATGATGGATATTGACCCCTTATAGATGTTGGATATTGA 9650 2322s *||| || |||*| || *||**||| || ||| ||*|| | ||| | 2322s Query: 870 ATAA---TG-GCTACGTT---CATTTTGG-TA-TGA----------ATCTT--A-ATT-A 906 2322s 2322s Target: 9651 CCCC-TTGTGGATGTATGGCCGGTGCTTTTCCCAGTATTTAGGTCATCTCTGCA---CAC 9706 2322s |||| ||*||*|| ||| ****||*|||||*|| ||| |||| ||||**| *|| 2322s Query: 907 CCCCTTTCTGCAT-TAT--TTAATGATTTTCTCA-TAT----GTCA-CTCTTAAATGTAC 957 2322s 2322s Target: 9707 TGTTGATTGTTTC-CTTT 9723 2322s |**|*||| |||| |||| 2322s Query: 958 TTCTAATT-TTTCACTTT 974 2322s 2322s target_name: chr1 2322s query_name: chr1 2322s optimal_alignment_score: 2002 suboptimal_alignment_score: 1000 strand: + target_begin: 1 target_end: 1001 query_begin: 1 query_end: 1001 2322s 2322s Target: 1 TAAACAGGTTAATCGCCACGACATAGTAGTATTTAGAGTTACTAGTAAGCCTGATGCCAC 60 2322s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2322s Query: 1 TAAACAGGTTAATCGCCACGACATAGTAGTATTTAGAGTTACTAGTAAGCCTGATGCCAC 60 2322s 2322s Target: 61 TACACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 2322s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2322s Query: 61 TACACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 2322s 2322s Target: 121 AAACATAGGAAAAAATTATTTAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTTA 180 2322s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2322s Query: 121 AAACATAGGAAAAAATTATTTAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTTA 180 2322s 2322s Target: 181 TAAGAGTGTTTTCCTATTGTTTTCAGTGTAGGACTCACTGTTCTAAATAACTGGGACACC 240 2322s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2322s Query: 181 TAAGAGTGTTTTCCTATTGTTTTCAGTGTAGGACTCACTGTTCTAAATAACTGGGACACC 240 2322s 2322s Target: 241 CAAGGATTCTGTAAAATGCCATCCAGTTATCATTTATATTCCCTAACTCAAAATTCATTC 300 2322s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2322s Query: 241 CAAGGATTCTGTAAAATGCCATCCAGTTATCATTTATATTCCCTAACTCAAAATTCATTC 300 2322s 2322s Target: 301 ACATGTATTCATTTTTTTCTAAACAAATTAGCATGTAGAATTCTGGTTAAAATTTGGCAT 360 2322s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2322s Query: 301 ACATGTATTCATTTTTTTCTAAACAAATTAGCATGTAGAATTCTGGTTAAAATTTGGCAT 360 2322s 2322s Target: 361 AGAACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGAATG 420 2322s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2322s Query: 361 AGAACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGAATG 420 2322s 2322s Target: 421 GTGATTTAACAAAGGATAATAAAGTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC 480 2322s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2322s Query: 421 GTGATTTAACAAAGGATAATAAAGTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC 480 2322s 2322s Target: 481 TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGAGAGAAAATTTCACT 540 2322s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2322s Query: 481 TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGAGAGAAAATTTCACT 540 2322s 2322s Target: 541 CCCTCCATAAATCTCACAGTATTCTTTTCTTTTTCCTTTCCTTTCCTTGCTCTTCTTTCT 600 2322s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2322s Query: 541 CCCTCCATAAATCTCACAGTATTCTTTTCTTTTTCCTTTCCTTTCCTTGCTCTTCTTTCT 600 2322s 2322s Target: 601 CTCCTATTGCTTTCCTTTCATTTCCTTCTCATAAAAGAAAAATAACAATATAGAAAATAA 660 2322s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2322s Query: 601 CTCCTATTGCTTTCCTTTCATTTCCTTCTCATAAAAGAAAAATAACAATATAGAAAATAA 660 2322s 2322s Target: 661 CAAAATATAGATGGTCAACCTTTTTAATATTAAGGTTACCTAAAATGCCATTATCCAAAG 720 2322s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2322s Query: 661 CAAAATATAGATGGTCAACCTTTTTAATATTAAGGTTACCTAAAATGCCATTATCCAAAG 720 2322s 2322s Target: 721 TGGTTCTCTAGAGATGCTGATGTATATACTTACATATTTTACAGTGTATTCAAATAAAGA 780 2322s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2322s Query: 721 TGGTTCTCTAGAGATGCTGATGTATATACTTACATATTTTACAGTGTATTCAAATAAAGA 780 2322s 2322s Target: 781 GTATATTACATAAGACATATCCTTTTGTAACCAACTTTTGTCATTAACAATTTACTGGAC 840 2322s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2322s Query: 781 GTATATTACATAAGACATATCCTTTTGTAACCAACTTTTGTCATTAACAATTTACTGGAC 840 2322s 2322s Target: 841 TTGTCAACAAACCTAAATCTGTATCGTCTATAATGGCTACGTTCATTTTGGTATGAATCT 900 2322s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2322s Query: 841 TTGTCAACAAACCTAAATCTGTATCGTCTATAATGGCTACGTTCATTTTGGTATGAATCT 900 2322s 2326s Target: 901 TAATTACCCCTTTCTGCATTATTTAATGATTTTCTCATATGTCACTCTTAAATGTACTTC 960 2326s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2326s Query: 901 TAATTACCCCTTTCTGCATTATTTAATGATTTTCTCATATGTCACTCTTAAATGTACTTC 960 2326s 2326s Target: 961 TAATTTTTCACTTTACATCACATAATGAATGGATCCAAATA 1001 2326s ||||||||||||||||||||||||||||||||||||||||| 2326s Query: 961 TAATTTTTCACTTTACATCACATAATGAATGGATCCAAATA 1001 2326s 2326s target_name: chr2 2326s query_name: chr1 2326s optimal_alignment_score: 312 suboptimal_alignment_score: 311 strand: + target_begin: 4437430 target_end: 4438470 query_begin: 9 query_end: 971 2326s 2326s Target: 4437430 TTGAT-TCCACAGATTCCAATAGAATAGTTTGAAGATGGAACAATTGAGAATTCTGAATG 4437488 2326s ||*|| *|||| || | |||| ||||*|**||| |**||*|*| ||**||| ||| 2326s Query: 9 TTAATCGCCAC-GA--C--ATAG--TAGTATTTAGA-GTTACTAGT---AAGCCTG-ATG 56 2326s 2326s Target: 4437489 ---CTAAGCTAAT--TAGATATGTTTTCTTTGAAGGAAAACTACATTGTATTATTTTGCC 4437543 2326s |||**| ||| |||*| | ||*||||| |||| | *|||||*|*|||**| 2326s Query: 57 CCACTACAC-AATTCTAGCT-T-TTCTCTTT--AGGA----T-GATTGTTTCATTCAG-- 104 2326s 2326s Target: 4437544 TCCTCCCTCCTCCTAGAAGCCTT----TAAAATTCATGCATCATTTTAAAAGTTTTGAAA 4437599 2326s ||*|**|| ||**|||||**|*| *|||||| || *|*||**||||| ||| || 2326s Query: 105 TCTTATCT-CTTTTAGAAAACATAGGAAAAAATT-AT--TTAATAATAAAA-TTT--AA- 156 2326s 2326s Target: 4437600 TTTTTCAAGATTATGTTTAA-GTAT--ATTA-AATATTTTGTTCAGTCATCCCAATTAGT 4437655 2326s ||**||| | ||| || |||| *||| ||*| *|||| |*||*||| || 2326s Query: 157 -TTGGCAA-A--ATG---AAGGTATGGCTTATAAGA--GTGTT------TTCCTATT-GT 200 2326s 2326s Target: 4437656 TTTCAATG--G----CCCT-TTCCATTTAAAGAGTTTGGACATTCCATATAAAAAAG-AC 4437707 2326s |||||*|| | |*|| ||| ||||*|**|*||||| *||| |**|****| |* 2326s Query: 201 TTTCAGTGTAGGACTCACTGTTC----TAAATAACTGGGACA-CCCA-AGGATTCTGTAA 254 2326s 2326s Target: 4437708 AATGTCATCTACA-TTTTC-TTTGTTTT--CT---T---AATT-AT----ATCTTTTCCT 4437752 2326s ||||*|||| || ||*|| |||*|*|| || | |||| || ||*|*|||*| 2326s Query: 255 AATGCCATC--CAGTTATCATTTATATTCCCTAACTCAAAATTCATTCACATGTATTCAT 312 2326s 2326s Target: 4437753 TTTTACAAATTTCTTAA-AAA-TAG-GTGTAAGATCTCTGATTTAACCTATGTGCGT--- 4437806 2326s ||| |||||*|| ||| ||| *||| |||**|||| *||||**|*|| ||*| 2326s Query: 313 TTT------TTTCTAAACAAATTAGCATGT-AGAATTCTG-GTTAAAATTTG-GCATAGA 363 2326s 2326s Target: 4437807 -C------TTAATTTTTCA----GCTTC---T--CTGTCATT---TTATT-AGATGTTTT 4437846 2326s | *||*||||||| ||**| | |||||||| |*||| ||| 2326s Query: 364 ACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGA------ 417 2326s 2326s Target: 4437847 TATTGT-TTTTAA------TTACTAAATTAATCTTAATCTATG-CTTATTATATCATTCT 4437898 2326s ||*|| *||||| *||*||||*|*|| **||*|*||| |**|**|*|||**||| 2326s Query: 418 -ATGGTGATTTAACAAAGGATAATAAAGTTAT-GAAACCAATGCCACAAAACATCTGTCT 475 2326s 2326s Target: 4437899 CCATTAC--GT-TATGGATACAACAACT-TG-GTGAATGTTTCTG----AGATTAACACT 4437949 2326s | |*|| || |*||**| *| || |||**|||*|*|| |||***|*|** 2326s Query: 476 C--TAACTGGTGTGTGTGT-------GTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGA 526 2326s 2326s Target: 4437950 AAAAATATTTAACAATCTCTCTCATTTTTATC----TTTTC-TTTCTTTTTCTCTTTGTC 4438004 2326s *|*||*|||| ||*||*||| |||***|*|| |*||| |||||||||| |||| *| 2326s Query: 527 GAGAAAATTT--CACTCCCTC-CATAAATCTCACAGTATTCTTTTCTTTTTC-CTTT-CC 581 2326s 2326s Target: 4438005 TTT-CTCACTCTCTATTTATCCTGTTACATCTTTGCTTCTATCTCTTTCTCTGTTTTTTT 4438063 2326s ||| ||**|||| |*|||*| ||**|| |||||| || ||||| *|||**|| 2326s Query: 582 TTTCCTTGCTCT-TCTTTCT-CTCCTA-----TTGCTT---TC-CTTTC---ATTTCCTT 627 2326s 2326s Target: 4438064 TTTTTAATATTTAAATAATGCTTCTGTCTGAGGAGGTTAAGAAGTGAAAGAAGACATTGT 4438123 2326s *|**|||*|***|||||| |**|*| || || || | ||*||*|*|| 2326s Query: 628 CTCATAAAAGAAAAATAA-----CAATAT-AG------AA-AA-T--AACAAAATAT--- 668 2326s 2326s Target: 4438124 GAGATGGAGAATCTTTATTAAGATAGAAG---AC--AAAGAGGGGATGAT-----GTGGA 4438173 2326s ||||||**||*|||| ||||*|| *||| || ||| |*|**||*|| |||| 2326s Query: 669 -AGATGGTCAACCTTT-TTAATAT-TAAGGTTACCTAAA-ATGCCATTATCCAAAGTGG- 723 2326s 2326s Target: 4438174 CACTT-TC-AG-GATG-TGGAATGGT---TACATACATTATT---CTGT-TA-TCACAAG 4438221 2326s || || || |||| || || || |||*|||| |||| |*|| || ||| || 2326s Query: 724 ---TTCTCTAGAGATGCTG--AT-GTATATACTTACA-TATTTTACAGTGTATTCA-AA- 774 2326s 2326s Target: 4438222 GTTAGCTAA-ACTCTCTTTCATAA-A-ATCTCTCTTGTTTCTTACTCCCTAAATCTCAAA 4438278 2326s || || |*|*|*||*||||| | ||*|| || |||*|*|| | || || 2326s Query: 775 --TA---AAGAGTATATTACATAAGACATATC-CT--TTTGTAAC-C---AA--CT---- 816 2326s 2326s Target: 4438279 TAAGTGACTAAAAAATGCCTGGA--TGACCCCAAACAGTAAGAATAGCTTGTA-GGTCTC 4438335 2326s |**||*|*|||*||*|**||||| ||*|**||||| *|| ||| | |||| *||||* 2326s Query: 817 TTTGTCATTAACAATTTACTGGACTTGTCAACAAAC-CTA--AAT--C-TGTATCGTCTA 870 2326s 2326s Target: 4438336 TGAAG---ATGTTATCTTTTGCCCTGGGAAGGTGGATTCCTATACTAACACCTGCACTTG 4438392 2326s |*|*| |*|| ||*||| |||*| ||*|| || ||*|*||*||| || 2326s Query: 871 TAATGGCTACGT--TCATTT----TGGTA---TGAAT--CT-TAATTACCCCT----TT- 913 2326s 2326s Target: 4438393 AAAAGGTGAACAAGATAATTTTGTATTTATTTTCTCACTA--CCACTGCAGGTAGCATGG 4438450 2326s *|| | ||*||| ||*|*||||||||| || *|||| | *|| *||| 2326s Query: 914 -----CTG--C---ATTATT---TAATGATTTTCTCA-TATGTCACT-C--TTA-AATG- 954 2326s 2326s Target: 4438451 GACACTTCTTTATTATTCAC 4438470 2326s *||||| |*|||*||||| 2326s Query: 955 --TACTTC-TAATTTTTCAC 971 2326s 2326s target_name: chr3 2326s query_name: chr1 2326s optimal_alignment_score: 291 suboptimal_alignment_score: 289 strand: + target_begin: 680970 target_end: 682002 query_begin: 9 query_end: 998 2326s 2326s Target: 680970 TTAAATTGTCA--ACATGGTA-TATATGAAATGAATTGGGTTTATAATAGTAAACCAATC 681026 2326s || |||*|*|| ||||*||| ||| |*| || || ||*||||||*|| |* 2326s Query: 9 TT-AATCGCCACGACATAGTAGTAT-TTA---GA-----GT---TACTAGTAAGCC--TG 53 2326s 2326s Target: 681027 TTG-CATTCCTAAAA---TA--AATCCTATTTAG--TTATCGT--------GTGTTATTT 681070 2326s *|| ||*|*| |*|| || **|*||*||||| |*||*|| ||*||| |* 2326s Query: 54 ATGCCACTAC-ACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTA-TC 111 2326s 2326s Target: 681071 TCTT----AATACAGTGTTGGATTAAGTTTGCTATTTTTTATTTTAAAATTTTACATTAT 681126 2326s |||| ||*||| |*|||**||*| || |||*||**||||| |||| || 2326s Query: 112 TCTTTTAGAAAACA---TAGGAAAAAAT----TA--TTTAATAATAAAA-TTTA----AT 157 2326s 2326s Target: 681127 TTTCTTCAGTGA---TATTGACCTGT---AGTTTTCTTTCATTATACTGTTTTATCAGAT 681180 2326s |**| **|*||| || ||*|*|*| |||*| |||| *||| ||||| |||| | 2326s Query: 158 TGGC-AAAATGAAGGTA-TGGCTTATAAGAGTGT--TTTC-CTAT--TGTTT--TCAG-T 207 2326s 2326s Target: 681181 TTAGGTATCAGTGTTAT-AGTTTCT---TCATGAAAGGAAT---TAAGATGTTTTCCTTC 681233 2326s *||||**|||*||||*| |*|**|| *||***|||||*| |||*||| ||*|| 2326s Query: 208 GTAGGACTCACTGTTCTAAATAACTGGGACACCCAAGGATTCTGTAAAATG----CCATC 263 2326s 2326s Target: 681234 C-CTT-TCA---ATGTT------CTGAATAATCATACAGCAT-TA-TGACTATCTGCCAT 681280 2326s | *|| ||| ||*|| ||*||*|*||||*|| ||| || |*|*|*|*| | 2326s Query: 264 CAGTTATCATTTATATTCCCTAACTCAAAATTCATTCA-CATGTATTCATTTTTT----T 318 2326s 2326s Target: 681281 TTAAATC--TTTAGAAT----AATTACCTTGTGAAACTATGTGGGCTTGGTGCTATTTTG 681334 2326s *|||| | *||||*|| |||| ||*||*||| || |*|||*|*|**| | ***| 2326s Query: 319 CTAAA-CAAATTAGCATGTAGAATT--CTGGTTAAA--AT-TTGGCATAGAAC-A-CCCG 370 2326s 2326s Target: 681335 TGTAGTATTTATC-TAATTGTTTCCTATA--TTTC-TT--CTA--TGAAATTGGTTGATT 681386 2326s *||| | |||*|| ||| ||***||*||| |*|| || ||| |||*|*||| ||||| 2326s Query: 371 GGTA-T-TTTTTCATAA-TGCACCCAATAACTGTCATTCACTAATTGAGAATGG-TGATT 426 2326s 2326s Target: 681387 TAATCTTTCTAACACTAATAAGATTAATTTGAGTAAACTTCATTTCTCTAGAAAATAATT 681446 2326s ||| |*||***||||||**||| || |||| ||*|*| | |*||||*| | 2326s Query: 427 TAA-----CAAAGGATAATAAAGTTA---TG---AAAC--CAATGC-C-ACAAAACA--T 469 2326s 2326s Target: 681447 AATTCATCAAATTAAATCAAATTTGAAATTTGATTTCAAATTTATTTGTGTCAAAGTAA- 681505 2326s ***|| || |||*|****|*|| |*|| |*| *|*|*|*|||||****|||| 2326s Query: 470 CTGTC-TC----TAACTGGTGTGTG---TGTG-TGT---GTGTGTGTGTGTGTGTGTAAG 517 2326s 2326s Target: 681506 A-GGAG-G--------TTTC-CT--GT-CATTTTAAAATTCTC----TGTTGTTTTAATA 681547 2326s | |||| | |||| || *| || |||| |||| |*||*|||| *|* 2326s Query: 518 AGGGAGAGAGAGAAAATTTCACTCCCTCCA---TAAA--TCTCACAGTATTCTTTT-CTT 571 2326s 2326s Target: 681548 GTAACTT--GTTT-CTTATTATTTATAACTTTAT---ATATT--TGTACTT---TTTCCT 681596 2326s *|**||| *||| |||**|*|| ||||*| *|||| |*|*||| ||||| 2326s Query: 572 TTTCCTTTCCTTTCCTTGCTCTT-----CTTTCTCTCCTATTGCTTTCCTTTCATTTCC- 625 2326s 2326s Target: 681597 TTTTTATCAAATG--AACT--GAGTTT------TAAC-----ATCGCAT--TTAA---TT 681636 2326s ||*|*|| |||*| ||*| *|*|*| |||| ||*| || |*|| || 2326s Query: 626 TTCTCAT-AAAAGAAAAATAACAATATAGAAAATAACAAAATATAG-ATGGTCAACCTTT 683 2326s 2326s Target: 681637 TTAATTATCTAATCTAAATCTAAAAGCTGATATTTGATTCAA-----TTGTC-AGAAATC 681690 2326s |||| ||| |||**| *|*|||||| ||**||| ||*||| ||*|| |||*|| 2326s Query: 684 TTAA-TAT-TAAGGT-TACCTAAAA--TGCCATT--ATCCAAAGTGGTTCTCTAGAGAT- 735 2326s 2326s Target: 681691 TCTTAAGTATATTGGGATCAACTTGGAAAAGTAAATTGACTTTAAACAGTACACTT--TA 681748 2326s *||*|*|||||| |||| |*| | ||| || |||||**| || *| 2326s Query: 736 GCTGATGTATAT--------ACTT--ACA--T--ATT---TT---ACAGTGTA-TTCAAA 774 2326s 2326s Target: 681749 TGAACTTTAAATTACAGATCAGATAT--TTTTAGTAA--AA-TTTTATCCAAACTAAGAT 681803 2326s |*||***||*||||||*|**|*|||| |||| |||| || ||||*|| |*||| 2326s Query: 775 TAAAGAGTATATTACATAAGACATATCCTTTT-GTAACCAACTTTTGTC---ATTAA--- 827 2326s 2326s Target: 681804 GCAATATGAGTATAATCACTGATTCAA-AAAGCTTCCTTTAGTGAGCATGAAATATC-TC 681861 2326s |||| |*|*|**|*| || |||| ||| || || *|*| || |||| | 2326s Query: 828 -CAAT-TTACTGGACT---TG--TCAACAAA----CC--TA--AATC-TG---TATCGT- 867 2326s 2326s Target: 681862 ACTATTTTAAT---T---TTAATATTGATTGTGTGTTAAAATAATAATAATTGCATTAT- 681914 2326s ||| |||| | ||*||*||| ||*|| |||**||||*|***|*||*| 2326s Query: 868 -CTA---TAATGGCTACGTTCATTTTG---GTATG----AATCTTAATTACCCCTTTCTG 916 2326s 2326s Target: 681915 -ATTATTGATAATGTGTATTCTTGTCATGTTTCCATTCTTACTGGAAATG--CCTCCAGT 681971 2326s |||||| ||||| ||| ||*||||*|*| ||*|||| ||||| |*||*|*| 2326s Query: 917 CATTATT--TAATG---ATT-TTCTCATATGT-CACTCTT-----AAATGTACTTCTAAT 964 2326s 2326s Target: 681972 GTTTC----TCCATCAAATAGTAT-ACTGGCTCTAA 682002 2326s *|||| |*|||||*||| || |*|||*||*|| 2326s Query: 965 TTTTCACTTTACATCACATA--ATGAATGGATCCAA 998 2326s 2326s target_name: chr4 2326s query_name: chr1 2326s optimal_alignment_score: 280 suboptimal_alignment_score: 273 strand: + target_begin: 47000 target_end: 48059 query_begin: 2 query_end: 1001 2326s 2326s Target: 47000 AAACATCTT-ATAGCTACTGGATTCTTTTTTGCCTATGTATTTA----TA-TATGT--G- 47050 2326s |||||**|| ||*||*|| || | *|*| || ||||||| || || || | 2326s Query: 2 AAACAGGTTAATCGCCAC--GA--C---ATAG--TA-GTATTTAGAGTTACTA-GTAAGC 50 2326s 2326s Target: 47051 CTGTAT----CTATGTAATGTCTA--TTTTTATAAAGCTCTAATTGACCTAGAGGAAAAT 47104 2326s ||| || |||***||| |||| |||| |||| || ||| || 2326s Query: 51 CTG-ATGCCACTACACAAT-TCTAGCTTTT-------CTCT--TT-------AGG---AT 89 2326s 2326s Target: 47105 GA--GTTT--TTGAATCAAATAT-TTTTTGAAGGGAAAGTAAAAACTGTGGTACATTGAA 47159 2326s || |||| ||*|*||**||*| ||||*|||***|*||*||||| ||| | 2326s Query: 90 GATTGTTTCATTCAGTCTTATCTCTTTTAGAAAACATAGGAAAAA---------ATT-A- 138 2326s 2326s Target: 47160 GTTCACATGACTAATCATTGAGAAATAAAAACAGACTTAGCAATTATTGGTAAAAAGCAG 47219 2326s || |||| ||||||| || |*|||||*||||*|*|| 2326s Query: 139 -TT--------TAAT--------AATAAAA------TT-----TAATTGGCAAAATGAAG 170 2326s 2326s Target: 47220 --ATG--TTAAAA-----TATAC--ATTTTTGTTCAGGGTTAAAGGA-T---TGTTCTGA 47264 2326s ||| |||*|| |*|*| |||*|| |||||*|| |||| | ||||||*| 2326s Query: 171 GTATGGCTTATAAGAGTGTTTTCCTATTGTT-TTCAGTGT---AGGACTCACTGTTCTAA 226 2326s 2326s Target: 47265 ATTA----GATA---A--GATAAAGCTAAAAGTTTAAACAAGTTATAA---AAAGTTTCT 47312 2326s ||*| ||*| | |||***| ||||| |***|*|*||||||*| |*|*|**|| 2326s Query: 227 ATAACTGGGACACCCAAGGATTCTG-TAAAA-TGCCATCCAGTTATCATTTATATTCCCT 284 2326s 2326s Target: 47313 A--T-AAAATTCATCTTGCCA-AAGAA---ATTTTGTCCATGAACATTAAATTACGAAAG 47365 2326s | | ||||||||| | || |*|*| |||||*|*| |*||| |||||| |*|*| 2326s Query: 285 AACTCAAAATTCAT-T---CACATGTATTCATTTTTTTC-TAAAC---AAATTA-GCATG 335 2326s 2326s Target: 47366 GTATTATATGTTTTTTTGGT--AAATTAAGCATTTAAATAATAGCACAACAAGGTA---- 47419 2326s ||*| *||*|||| |||||**|| ||||*|||*|**|||| 2326s Query: 336 ----TAGA----ATTCTGGTTAAAATTTGGC---------ATAGAACACCCGGGTATTTT 378 2326s 2326s Target: 47420 CTCTTAAGGCAC----TAATCTGCTCTTTAGCAAAATTTGTAAA--GTG--TTATAAACG 47471 2326s *||*|||*|||| ||| ||| ||*|| ||**|*|||**|| ||| |||**||*| 2326s Query: 379 TTCATAATGCACCCAATAA-CTG-TCATT--CACTAATTGAGAATGGTGATTTAACAAAG 434 2326s 2326s Target: 47472 GGTTTTACTTTTGTAAATTTTTTGAAACAATTGTGGCAAAA------TAAATAACATGGT 47525 2326s | | |**|||| *||*||||||*|*||***||||| |***|||| |||| 2326s Query: 435 G-----A---TAATAAA-GTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC-TGGT 484 2326s 2326s Target: 47526 AATCTG-GAAT-TCTATTTCATAACATCAAGTGT-TTTAA-------ACCTCTAACATTT 47575 2326s *|*|| |**| |*|*|*| *| *| |||| |*||| |*****||*|||| 2326s Query: 485 -GTGTGTGTGTGTGTGTGT-GT---GT---GTGTGTGTAAGAGGGAGAGAGAGAAAATTT 536 2326s 2326s Target: 47576 C-TTC---CCA-AAATCAAAC----TTCAGTTTCAAAATTGT--CTTTCCT---CGTGC- 47620 2326s | *|| ||| |||||**|| ||| *|||| ||*| ||||||| |*||| 2326s Query: 537 CACTCCCTCCATAAATCTCACAGTATTC-TTTTC----TTTTTCCTTTCCTTTCCTTGCT 591 2326s 2326s Target: 47621 CTGACTTT-TGAATGCTACAGAGGGC---CCCTGGAGTATCC-------AAAAGAGAGGT 47669 2326s || *|||| | || |**|**|| ||*|**| |*||| ||||||*|**| 2326s Query: 592 CT-TCTTTCT-----CT-CCTATTGCTTTCCTTTCA-TTTCCTTCTCATAAAAGAAAAAT 643 2326s 2326s Target: 47670 AAACTGGATTATTTGACATATTTAGTTACATGGGATTGCCAATCTTCTTTAGGTTATAT- 47728 2326s ||| |*|||***|*|||***|**||*| |||*|*|||*||| |||| |||| 2326s Query: 644 -AAC---AATATAGAAAATAACAAAATATA---GATGGTCAACCTT-TTTA----ATATT 691 2326s 2326s Target: 47729 -AGGTTA--TATTTTG--AT-----AAA-T-ATTCTATAGGTTATATTTTGATAAATGAT 47776 2326s |||||| ||***|| || ||| | *||||*||| |*||**||||**|| || 2326s Query: 692 AAGGTTACCTAAAATGCCATTATCCAAAGTGGTTCTCTAG---AGATGCTGATGTAT-AT 747 2326s 2326s Target: 47777 ACTAATATATGTTCCAAAATTGTATGAGATTTCTAATGTCTGAGTATATGCTATCAAAAT 47836 2326s |||*|*||||*|| |*|*|||| |||*||| ***|||||||| || || 2326s Query: 748 ACTTACATATTTT---ACAGTGTA------TTCAAAT-AAAGAGTATAT--TA-CA---- 790 2326s 2326s Target: 47837 TAAG--GTTT--TTATGT---TAAGTTATTGT-A--AAC----CACAGAGA-TT---ATC 47878 2326s |||| *|*| ||*||| *||*|| |||| | ||| *||*| || || |*| 2326s Query: 791 TAAGACATATCCTTTTGTAACCAACTT-TTGTCATTAACAATTTACTG-GACTTGTCAAC 848 2326s 2326s Target: 47879 AAACTTCTTTGTCAACTGTGTTTCTGACTATAA---CTACCCTGGACATTTTGTTATTCA 47935 2326s |||| || ||*|*|||*|| |*|||||| |||| |**|||||||*||| 2326s Query: 849 AAAC--CT-----AAATCTGTATC-GTCTATAATGGCTAC---GTTCATTTTGGTAT--- 894 2326s 2326s Target: 47936 AAGACAATTGTCTTGTTTAGATCCTTTTCAAGAGATAGTTTATAAGA--AGCTACAGAAC 47993 2326s || | ||||**|| |*||*|||| *| *||**|||| |*|| **|| ||*| 2326s Query: 895 --GA-A----TCTTAATT--ACCCCTTTC-TG-CATTATTTA-ATGATTTTCT-CATA-- 939 2326s 2326s Target: 47994 TGTGACAGGTGCTCTCAAATGCAGTTTTCCAA---ATAACTTTGGAGATCATGACAT--T 48048 2326s ||| || ||||*|||||*| *|||*|| *|*||||| | |||*|||| | 2326s Query: 940 TGT--CA----CTCTTAAATGTA--CTTCTAATTTTTCACTTT--A---CATCACATAAT 986 2326s 2326s Target: 48049 GAA---AT--AAAGTA 48059 2326s ||| || ||| || 2326s Query: 987 GAATGGATCCAAA-TA 1001 2326s 2326s target_name: chr5 2326s query_name: chr1 2326s optimal_alignment_score: 230 suboptimal_alignment_score: 199 strand: + target_begin: 8806 target_end: 9723 query_begin: 11 query_end: 974 2326s 2326s Target: 8806 AATGGCCAGGGCACTGAGGAG-CTGTGGAAGAACTGGGGAAATCACCGAAACCCAGTAC- 8863 2326s |||*||||*|*|| | ||*|| *|*|*||***||| *|*||*| |*| |**|||*||| 2326s Query: 11 AATCGCCACGACA-T-AGTAGTATTTAGAGTTACT--AGTAAGC-CTG-ATGCCACTACA 64 2326s 2326s Target: 8864 CATTTCAGTGAGGCCATTCTC--CA--AAAACTCTCTC---CA-TCTTATTTCTT---G- 8911 2326s ||*||| | | ||**||||| *| |**|*|*|*|| || ||||||*|||| | 2326s Query: 65 CAATTC--T-A-GCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 2326s 2326s Target: 8912 ------GGGAAAGAGTTCTTCTACT--TACAATATGAT---CAACCTGA--TTAAG---A 8955 2326s *|||||*|*||*|| ||*| ||*|||*|*|| |||**||| *||*| * 2326s Query: 121 AAACATAGGAAAAAATTATT-TAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTT 179 2326s 2326s Target: 8956 AT-ATATTGGTTT-CTATAACTGTGATGCAGATTATAACTATACAAATGCCAATTACCAG 9013 2326s || |*|*||*||| |||| ||| *|*|||**||**||| | |*|| || |*|* 2326s Query: 180 ATAAGAGTGTTTTCCTAT---TGT-TTTCAGTGTAGGACT---C-ACTG----TT-CTAA 226 2326s 2326s Target: 9014 A-AGCTAAGCCACCC--TGATTC--CAAAAT---AT--AGTCTCACATTTCATGGTTTCC 9063 2326s | |*||**|*||||| *||||| *||||| || ||| |**||||| || *|||| 2326s Query: 227 ATAACTGGGACACCCAAGGATTCTGTAAAATGCCATCCAGT-TATCATTT-AT--ATTCC 282 2326s 2326s Target: 9064 TGGTA--TCAGAAATCCCTATGAGCCTG-A--GATTTTTTCCCTTAA-------AGCA-- 9109 2326s *|| ||| ||||*|*| |*| |*|| | *|||||||*| ||| |||| 2326s Query: 283 --CTAACTCA-AAATTCAT-TCA-CATGTATTCATTTTTTTC--TAAACAAATTAGCATG 335 2326s 2326s Target: 9110 ---AATACTG---AAGAT-----A-AGAA-ACC----AATTAATTTCATTGTTGC----- 9147 2326s |||*||| ||*|| | |||| ||| *||| *||||| |**||| 2326s Query: 336 TAGAATTCTGGTTAAAATTTGGCATAGAACACCCGGGTATT-TTTTCA-TAATGCACCCA 393 2326s 2326s Target: 9148 -TATCTTGT-AT---CCAATGGCATAA----AATCTATACTAACTTGATTAGAAA-TTCT 9197 2326s ||*| ||| || |*|||*| |*|| *||*|| ||*|| *|||*|*||| ||*| 2326s Query: 394 ATAAC-TGTCATTCACTAATTG-AGAATGGTGATTTA-ACAAA--GGATAATAAAGTTAT 448 2326s 2326s Target: 9198 G---CCAATG------AACAACT-T---TA--T--TGT-TTTGAGTGATG---------- 9229 2326s | |||||| ||||*|| | || | ||| |*||*||| || 2326s Query: 449 GAAACCAATGCCACAAAACATCTGTCTCTAACTGGTGTGTGTGTGTG-TGTGTGTGTGTG 507 2326s 2326s Target: 9230 -------AAGCCCCATTTGAGA-ATATAGGCTCAATGGCCTTGC-----TCT-----TA- 9270 2326s |||****| |||| |*|*|***|||*| ||*|*| ||| || 2326s Query: 508 TGTGTGTAAGAGGGA---GAGAGAGAAAATTTCACT--CCCTCCATAAATCTCACAGTAT 562 2326s 2326s Target: 9271 ACTGTTCTCTATGCAGTCACTTTCTTCTGCACTAAAGTGCCAATACAGATACTG-AATAC 9329 2326s *||*||||*|*|*|**|| |||||*| |||*|| **|**|**|*| ||*|| **|*| 2326s Query: 563 TCTTTTCTTTTTCCTTTC-CTTTCCT-TGCTCT--TCTTTCTCTCC---TATTGCTTTCC 615 2326s 2326s Target: 9330 ATTGATTTAAAT-ACATAGATATATAAATA--GATAT-TTAAATATGC--AATATATATG 9383 2326s *||*||||***| *|||| |*|*|*||||| *|||| **||||| *| ||||||*||| 2326s Query: 616 TTTCATTTCCTTCTCATA-AAAGAAAAATAACAATATAGAAAATA-ACAAAATATAGATG 673 2326s 2326s Target: 9384 G--ATAC---TTTATATATT--GATT---TAAA----CATTTTCC--------TCTCATA 9421 2326s | | || |||| ||||| |*|| |||| ||||*||| |||| || 2326s Query: 674 GTCA-ACCTTTTTA-ATATTAAGGTTACCTAAAATGCCATTATCCAAAGTGGTTCTC-TA 730 2326s 2326s Target: 9422 GA-----TGA--AAAATCACTCTAACATGTATTGATGGCTTCACA-AGAAATCATTTACA 9473 2326s || ||| *|*|| ||| | ||| |||| || ||| *|*|*|||**||*| 2326s Query: 731 GAGATGCTGATGTATAT-ACT-T-ACA--TATT------TT-ACAGTGTATTCAAATAAA 778 2326s 2326s Target: 9474 GAAAATAATTGCATATGATACAGT--GTTTGTGCCAAAATGTATTCATGGCTTTAAAAAC 9531 2326s ||**|| |||*||||*||*|*| | *|||||**|*||*| || ||*|*||||*|| 2326s Query: 779 GAGTAT-ATTACATAAGACATA-TCCTTTTGTAACCAACT---TT--TGTCATTAACAA- 830 2326s 2326s Target: 9532 TTCAGTGGAAATGTCTATTCAGATCCCTAGCCCATTGTTAAATTGGTTTCTGTTTTCTTG 9591 2326s ||*|*||||**||||*| || |*|| |||||**||*|| | ||| 2326s Query: 831 TTTACTGGACTTGTCAA--CA-AACC------------TAAATCTGTATC-G---TCT-- 869 2326s 2326s Target: 9592 CTAAGTTTGAGCTGC-TTATAGATGATGGATATTGACCCCTTATAGATGTTGGATATTGA 9650 2326s *||| || |||*| || *||**||| || ||| ||*|| | ||| | 2326s Query: 870 ATAA---TG-GCTACGTT---CATTTTGG-TA-TGA----------ATCTT--A-ATT-A 906 2326s 2326s Target: 9651 CCCC-TTGTGGATGTATGGCCGGTGCTTTTCCCAGTATTTAGGTCATCTCTGCA---CAC 9706 2326s |||| ||*||*|| ||| ****||*|||||*|| ||| |||| ||||**| *|| 2326s Query: 907 CCCCTTTCTGCAT-TAT--TTAATGATTTTCTCA-TAT----GTCA-CTCTTAAATGTAC 957 2326s 2326s Target: 9707 TGTTGATTGTTTC-CTTT 9723 2326s |**|*||| |||| |||| 2326s Query: 958 TTCTAATT-TTTCACTTT 974 2326s 2326s CPU time: 4.382961 seconds 2330s autopkgtest [14:49:42]: test run-example: -----------------------] 2331s autopkgtest [14:49:43]: test run-example: - - - - - - - - - - results - - - - - - - - - - 2331s run-example PASS 2332s autopkgtest [14:49:44]: @@@@@@@@@@@@@@@@@@@@ summary 2332s build-lib PASS 2332s build-lib-java PASS 2332s run-example PASS 2351s nova [W] Skipping flock in bos03-arm64 2351s Creating nova instance adt-oracular-arm64-libssw-20240612-122509-juju-7f2275-prod-proposed-migration-environment-2-ad60420d-03a8-4458-8672-120293c3300b from image adt/ubuntu-oracular-arm64-server-20240612.img (UUID a51688a2-7056-4c83-911b-127babab586e)... 2351s nova [W] Skipping flock in bos03-arm64 2351s Creating nova instance adt-oracular-arm64-libssw-20240612-122509-juju-7f2275-prod-proposed-migration-environment-2-ad60420d-03a8-4458-8672-120293c3300b from image adt/ubuntu-oracular-arm64-server-20240612.img (UUID a51688a2-7056-4c83-911b-127babab586e)... 2351s nova [W] Skipping flock in bos03-arm64 2351s Creating nova instance adt-oracular-arm64-libssw-20240612-122509-juju-7f2275-prod-proposed-migration-environment-2-ad60420d-03a8-4458-8672-120293c3300b from image adt/ubuntu-oracular-arm64-server-20240612.img (UUID a51688a2-7056-4c83-911b-127babab586e)...