0s autopkgtest [09:56:21]: starting date and time: 2024-07-11 09:56:21+0000
  0s autopkgtest [09:56:21]: git checkout: fd3bed09 nova: allow more retries for quota issues
  0s autopkgtest [09:56:21]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.tdhhu7_m/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:q2-types --apt-upgrade q2-quality-filter --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=q2-types/2024.5.0-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos03-arm64-31.secgroup --name adt-oracular-arm64-q2-quality-filter-20240711-095621-juju-7f2275-prod-proposed-migration-environment-3-a703e774-fce6-477b-900a-676e33a7d2fb --image adt/ubuntu-oracular-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
 71s autopkgtest [09:57:32]: testbed dpkg architecture: arm64
 72s autopkgtest [09:57:33]: testbed apt version: 2.9.6
 72s autopkgtest [09:57:33]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 72s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB]
 73s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B]
 73s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [52.5 kB]
 73s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [335 kB]
 73s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [2576 B]
 73s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 Packages [108 kB]
 73s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 c-n-f Metadata [2504 B]
 73s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/restricted arm64 Packages [43.9 kB]
 73s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted arm64 c-n-f Metadata [364 B]
 73s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe arm64 Packages [350 kB]
 73s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/universe arm64 c-n-f Metadata [7704 B]
 73s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse arm64 Packages [7596 B]
 73s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse arm64 c-n-f Metadata [276 B]
 75s Fetched 1045 kB in 1s (1175 kB/s)
 75s Reading package lists...
 78s Reading package lists...
 79s Building dependency tree...
 79s Reading state information...
 79s Calculating upgrade...
 80s The following packages will be upgraded:
 80s   initramfs-tools initramfs-tools-bin initramfs-tools-core
 80s   libheif-plugin-aomdec libheif-plugin-aomenc libheif-plugin-libde265 libheif1
 80s 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 80s Need to get 371 kB of archives.
 80s After this operation, 2048 B of additional disk space will be used.
 80s Get:1 http://ftpmaster.internal/ubuntu oracular/main arm64 initramfs-tools all 0.142ubuntu30 [7908 B]
 80s Get:2 http://ftpmaster.internal/ubuntu oracular/main arm64 initramfs-tools-core all 0.142ubuntu30 [49.9 kB]
 80s Get:3 http://ftpmaster.internal/ubuntu oracular/main arm64 initramfs-tools-bin arm64 0.142ubuntu30 [21.4 kB]
 80s Get:4 http://ftpmaster.internal/ubuntu oracular/main arm64 libheif-plugin-aomdec arm64 1.17.6-3build2 [10.1 kB]
 80s Get:5 http://ftpmaster.internal/ubuntu oracular/main arm64 libheif-plugin-aomenc arm64 1.17.6-3build2 [13.8 kB]
 80s Get:6 http://ftpmaster.internal/ubuntu oracular/main arm64 libheif1 arm64 1.17.6-3build2 [260 kB]
 81s Get:7 http://ftpmaster.internal/ubuntu oracular/main arm64 libheif-plugin-libde265 arm64 1.17.6-3build2 [8136 B]
 81s Fetched 371 kB in 1s (696 kB/s)
 82s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 78393 files and directories currently installed.)
 82s Preparing to unpack .../0-initramfs-tools_0.142ubuntu30_all.deb ...
 82s Unpacking initramfs-tools (0.142ubuntu30) over (0.142ubuntu29) ...
 82s Preparing to unpack .../1-initramfs-tools-core_0.142ubuntu30_all.deb ...
 82s Unpacking initramfs-tools-core (0.142ubuntu30) over (0.142ubuntu29) ...
 82s Preparing to unpack .../2-initramfs-tools-bin_0.142ubuntu30_arm64.deb ...
 82s Unpacking initramfs-tools-bin (0.142ubuntu30) over (0.142ubuntu29) ...
 82s Preparing to unpack .../3-libheif-plugin-aomdec_1.17.6-3build2_arm64.deb ...
 82s Unpacking libheif-plugin-aomdec:arm64 (1.17.6-3build2) over (1.17.6-3build1) ...
 82s Preparing to unpack .../4-libheif-plugin-aomenc_1.17.6-3build2_arm64.deb ...
 82s Unpacking libheif-plugin-aomenc:arm64 (1.17.6-3build2) over (1.17.6-3build1) ...
 82s Preparing to unpack .../5-libheif1_1.17.6-3build2_arm64.deb ...
 82s Unpacking libheif1:arm64 (1.17.6-3build2) over (1.17.6-3build1) ...
 82s Preparing to unpack .../6-libheif-plugin-libde265_1.17.6-3build2_arm64.deb ...
 82s Unpacking libheif-plugin-libde265:arm64 (1.17.6-3build2) over (1.17.6-3build1) ...
 82s Setting up initramfs-tools-bin (0.142ubuntu30) ...
 82s Setting up initramfs-tools-core (0.142ubuntu30) ...
 82s Setting up initramfs-tools (0.142ubuntu30) ...
 82s update-initramfs: deferring update (trigger activated)
 82s Setting up libheif-plugin-aomdec:arm64 (1.17.6-3build2) ...
 82s Setting up libheif1:arm64 (1.17.6-3build2) ...
 82s Setting up libheif-plugin-libde265:arm64 (1.17.6-3build2) ...
 82s Setting up libheif-plugin-aomenc:arm64 (1.17.6-3build2) ...
 82s Processing triggers for libc-bin (2.39-0ubuntu9) ...
 82s Processing triggers for man-db (2.12.1-2) ...
 83s Processing triggers for initramfs-tools (0.142ubuntu30) ...
 83s update-initramfs: Generating /boot/initrd.img-6.8.0-31-generic
 83s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
108s System running in EFI mode, skipping.
109s Reading package lists...
109s Building dependency tree...
109s Reading state information...
111s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
112s Hit:1 http://ftpmaster.internal/ubuntu oracular InRelease
112s Hit:2 http://ftpmaster.internal/ubuntu oracular-updates InRelease
112s Hit:3 http://ftpmaster.internal/ubuntu oracular-security InRelease
112s Hit:4 http://ftpmaster.internal/ubuntu oracular-proposed InRelease
114s Reading package lists...
114s Reading package lists...
115s Building dependency tree...
115s Reading state information...
115s Calculating upgrade...
115s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
115s Reading package lists...
116s Building dependency tree...
116s Reading state information...
116s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
117s autopkgtest [09:58:18]: rebooting testbed after setup commands that affected boot
122s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds...
155s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds...
162s autopkgtest [09:59:03]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP PREEMPT_DYNAMIC Sat Apr 20 02:32:42 UTC 2024
165s autopkgtest [09:59:06]: @@@@@@@@@@@@@@@@@@@@ apt-source q2-quality-filter
167s Get:1 http://ftpmaster.internal/ubuntu oracular/universe q2-quality-filter 2024.5.0-1ubuntu1 (dsc) [2305 B]
167s Get:2 http://ftpmaster.internal/ubuntu oracular/universe q2-quality-filter 2024.5.0-1ubuntu1 (tar) [257 kB]
167s Get:3 http://ftpmaster.internal/ubuntu oracular/universe q2-quality-filter 2024.5.0-1ubuntu1 (diff) [7144 B]
168s gpgv: Signature made Wed Jul 10 13:03:05 2024 UTC
168s gpgv:                using RSA key 92978A6E195E4921825F7FF0F34F09744E9F5DD9
168s gpgv: Can't check signature: No public key
168s dpkg-source: warning: cannot verify inline signature for ./q2-quality-filter_2024.5.0-1ubuntu1.dsc: no acceptable signature found
168s autopkgtest [09:59:09]: testing package q2-quality-filter version 2024.5.0-1ubuntu1
168s autopkgtest [09:59:09]: build not needed
169s autopkgtest [09:59:10]: test run-unit-test: preparing testbed
170s Reading package lists...
170s Building dependency tree...
170s Reading state information...
171s Starting pkgProblemResolver with broken count: 0
171s Starting 2 pkgProblemResolver with broken count: 0
171s Done
172s The following additional packages will be installed:
172s   fonts-glyphicons-halflings javascript-common libaec0 libblas3 libgfortran5
172s   libgomp1 libhdf5-103-1t64 libhdf5-hl-100t64 libjs-bootstrap libjs-jquery
172s   libjs-jquery-hotkeys libjs-jquery-isonscreen libjs-jquery-metadata
172s   libjs-jquery-tablesorter libjs-jquery-throttle-debounce libjs-popper.js
172s   liblapack3 liblbfgsb0 liblzf1 libnorm1t64 libopenblas0 libopenblas0-pthread
172s   libpgm-5.3-0t64 libsodium23 libssw0 libsz2 libxslt1.1 libyajl2 libzmq5
172s   node-fortawesome-fontawesome-free node-normalize.css python3-all
172s   python3-bcrypt python3-bibtexparser python3-biom-format python3-click
172s   python3-colorama python3-coverage python3-dateutil python3-decorator
172s   python3-dill python3-filelock python3-flask python3-flask-sqlalchemy
172s   python3-flufl.lock python3-globus-sdk python3-greenlet python3-h5py
172s   python3-h5py-serial python3-hdmedians python3-ijson python3-iniconfig
172s   python3-itsdangerous python3-lxml python3-nacl python3-natsort
172s   python3-networkx python3-numpy python3-packaging python3-pandas
172s   python3-pandas-lib python3-paramiko python3-parsl python3-platformdirs
172s   python3-pluggy python3-psutil python3-public python3-py python3-pytest
172s   python3-pytest-cov python3-scipy python3-setproctitle python3-setuptools
172s   python3-skbio python3-sqlalchemy python3-tblib python3-tomlkit
172s   python3-typeguard python3-tzlocal python3-werkzeug python3-zmq
172s   q2-quality-filter q2-types q2templates qiime
172s Suggested packages:
172s   apache2 | lighttpd | httpd libjs-html5shiv python-biom-format-doc
172s   python-coverage-doc python3-objgraph python3-dotenv python-flask-doc
172s   python-flufl.lock-doc python-greenlet-dev python-greenlet-doc
172s   python-h5py-doc python-lxml-doc python-nacl-doc python-natsort-doc
172s   python3-gdal python3-matplotlib python3-pydot python3-pygraphviz gcc
172s   gfortran python-numpy-doc python3-dev python-pandas-doc python3-statsmodels
172s   python3-gssapi python3-invoke python-public-doc subversion python-scipy-doc
172s   python-setuptools-doc python-skbio-doc python-sqlalchemy-doc python3-fdb
172s   python3-pymssql python3-mysqldb python3-psycopg2 python3-asyncpg
172s   python3-aiosqlite ipython3 python-werkzeug-doc python3-watchdog
172s Recommended packages:
172s   node-jquery python3-asgiref python3-simplejson python3-bs4 python3-cssselect
172s   python3-html5lib python3-matplotlib python3-bottleneck python3-numexpr
172s   python3-odf python3-openpyxl python3-tables r-cran-plotly g++ | c++-compiler
172s   python3-pil python3-sqlalchemy-ext python3-pyinotify q2cli q2-cutadapt
172s   q2-metadata q2-demux q2-feature-classifier q2-feature-table
172s The following NEW packages will be installed:
172s   autopkgtest-satdep fonts-glyphicons-halflings javascript-common libaec0
172s   libblas3 libgfortran5 libgomp1 libhdf5-103-1t64 libhdf5-hl-100t64
172s   libjs-bootstrap libjs-jquery libjs-jquery-hotkeys libjs-jquery-isonscreen
172s   libjs-jquery-metadata libjs-jquery-tablesorter
172s   libjs-jquery-throttle-debounce libjs-popper.js liblapack3 liblbfgsb0 liblzf1
172s   libnorm1t64 libopenblas0 libopenblas0-pthread libpgm-5.3-0t64 libsodium23
172s   libssw0 libsz2 libxslt1.1 libyajl2 libzmq5 node-fortawesome-fontawesome-free
172s   node-normalize.css python3-all python3-bcrypt python3-bibtexparser
172s   python3-biom-format python3-click python3-colorama python3-coverage
172s   python3-dateutil python3-decorator python3-dill python3-filelock
172s   python3-flask python3-flask-sqlalchemy python3-flufl.lock python3-globus-sdk
172s   python3-greenlet python3-h5py python3-h5py-serial python3-hdmedians
172s   python3-ijson python3-iniconfig python3-itsdangerous python3-lxml
172s   python3-nacl python3-natsort python3-networkx python3-numpy
172s   python3-packaging python3-pandas python3-pandas-lib python3-paramiko
172s   python3-parsl python3-platformdirs python3-pluggy python3-psutil
172s   python3-public python3-py python3-pytest python3-pytest-cov python3-scipy
172s   python3-setproctitle python3-setuptools python3-skbio python3-sqlalchemy
172s   python3-tblib python3-tomlkit python3-typeguard python3-tzlocal
172s   python3-werkzeug python3-zmq q2-quality-filter q2-types q2templates qiime
172s 0 upgraded, 86 newly installed, 0 to remove and 0 not upgraded.
172s Need to get 65.4 MB/65.4 MB of archives.
172s After this operation, 359 MB of additional disk space will be used.
172s Get:1 /tmp/autopkgtest.wVPzL0/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [736 B]
172s Get:2 http://ftpmaster.internal/ubuntu oracular/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
172s Get:3 http://ftpmaster.internal/ubuntu oracular/universe arm64 libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2.1 [11.5 kB]
172s Get:4 http://ftpmaster.internal/ubuntu oracular/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
172s Get:5 http://ftpmaster.internal/ubuntu oracular/main arm64 javascript-common all 11+nmu1 [5936 B]
172s Get:6 http://ftpmaster.internal/ubuntu oracular/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB]
172s Get:7 http://ftpmaster.internal/ubuntu oracular/main arm64 libblas3 arm64 3.12.0-3build1 [143 kB]
172s Get:8 http://ftpmaster.internal/ubuntu oracular/main arm64 libgfortran5 arm64 14.1.0-1ubuntu1 [443 kB]
172s Get:9 http://ftpmaster.internal/ubuntu oracular/main arm64 libgomp1 arm64 14.1.0-1ubuntu1 [144 kB]
172s Get:10 http://ftpmaster.internal/ubuntu oracular/universe arm64 libsz2 arm64 1.1.3-1 [5254 B]
172s Get:11 http://ftpmaster.internal/ubuntu oracular/universe arm64 libhdf5-103-1t64 arm64 1.10.10+repack-3.1ubuntu4 [1192 kB]
172s Get:12 http://ftpmaster.internal/ubuntu oracular/universe arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-3.1ubuntu4 [55.8 kB]
172s Get:13 http://ftpmaster.internal/ubuntu oracular/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
172s Get:14 http://ftpmaster.internal/ubuntu oracular/universe arm64 libjs-jquery-metadata all 12-4 [6582 B]
172s Get:15 http://ftpmaster.internal/ubuntu oracular/universe arm64 libjs-jquery-tablesorter all 1:2.31.3+dfsg1-3 [193 kB]
172s Get:16 http://ftpmaster.internal/ubuntu oracular/universe arm64 libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.5 kB]
172s Get:17 http://ftpmaster.internal/ubuntu oracular/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB]
172s Get:18 http://ftpmaster.internal/ubuntu oracular/universe arm64 libopenblas0-pthread arm64 0.3.27+ds-2 [5458 kB]
173s Get:19 http://ftpmaster.internal/ubuntu oracular/main arm64 liblapack3 arm64 3.12.0-3build1 [2241 kB]
173s Get:20 http://ftpmaster.internal/ubuntu oracular/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB]
173s Get:21 http://ftpmaster.internal/ubuntu oracular/universe arm64 liblzf1 arm64 3.6-4 [7426 B]
173s Get:22 http://ftpmaster.internal/ubuntu oracular/universe arm64 libnorm1t64 arm64 1.5.9+dfsg-3.1build1 [150 kB]
173s Get:23 http://ftpmaster.internal/ubuntu oracular/universe arm64 libopenblas0 arm64 0.3.27+ds-2 [6222 B]
173s Get:24 http://ftpmaster.internal/ubuntu oracular/universe arm64 libpgm-5.3-0t64 arm64 5.3.128~dfsg-2.1build1 [162 kB]
173s Get:25 http://ftpmaster.internal/ubuntu oracular/main arm64 libsodium23 arm64 1.0.18-1build3 [119 kB]
173s Get:26 http://ftpmaster.internal/ubuntu oracular/universe arm64 libssw0 arm64 1.1-14build1 [21.4 kB]
173s Get:27 http://ftpmaster.internal/ubuntu oracular/main arm64 libxslt1.1 arm64 1.1.39-0exp1build1 [166 kB]
173s Get:28 http://ftpmaster.internal/ubuntu oracular/universe arm64 libzmq5 arm64 4.3.5-1build2 [247 kB]
173s Get:29 http://ftpmaster.internal/ubuntu oracular/universe arm64 node-fortawesome-fontawesome-free all 6.4.2+ds1-1 [1573 kB]
173s Get:30 http://ftpmaster.internal/ubuntu oracular/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB]
173s Get:31 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-all arm64 3.12.3-0ubuntu1 [888 B]
173s Get:32 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-bibtexparser all 2.0.0b5+really1.4.1-1 [34.5 kB]
173s Get:33 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-numpy arm64 1:1.26.4+ds-10 [3565 kB]
173s Get:34 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-h5py-serial arm64 3.10.0-1ubuntu3 [888 kB]
173s Get:35 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-h5py all 3.10.0-1ubuntu3 [7978 B]
173s Get:36 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-colorama all 0.4.6-4 [32.1 kB]
173s Get:37 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-click all 8.1.7-1 [79.1 kB]
173s Get:38 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-dateutil all 2.9.0-2 [80.3 kB]
173s Get:39 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-pandas-lib arm64 2.1.4+dfsg-8 [4178 kB]
173s Get:40 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-pandas all 2.1.4+dfsg-8 [3042 kB]
173s Get:41 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-decorator all 5.1.1-5 [10.1 kB]
173s Get:42 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-scipy arm64 1.12.0-2 [15.9 MB]
174s Get:43 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-biom-format arm64 2.1.16-1 [137 kB]
174s Get:44 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-coverage arm64 7.4.4+dfsg1-0ubuntu2 [148 kB]
174s Get:45 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-dill all 0.3.8-1 [83.0 kB]
174s Get:46 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-filelock all 3.15.4-1 [12.8 kB]
174s Get:47 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-itsdangerous all 2.2.0-1 [15.2 kB]
174s Get:48 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-werkzeug all 3.0.3-1 [170 kB]
174s Get:49 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-flask all 3.0.3-1ubuntu1 [83.2 kB]
174s Get:50 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-greenlet arm64 3.0.3-0ubuntu5 [153 kB]
174s Get:51 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-sqlalchemy all 1.4.50+ds1-1build1 [1020 kB]
174s Get:52 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-flask-sqlalchemy all 3.0.3-1 [30.9 kB]
174s Get:53 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-psutil arm64 5.9.8-2build2 [196 kB]
174s Get:54 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-public all 4.1.0-1 [7052 B]
174s Get:55 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-flufl.lock all 8.1.0-1 [12.4 kB]
174s Get:56 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-globus-sdk all 3.41.0-1 [225 kB]
174s Get:57 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-hdmedians arm64 0.14.2-5.1build1 [116 kB]
174s Get:58 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B]
174s Get:59 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-lxml arm64 5.2.1-1 [1179 kB]
174s Get:60 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-nacl arm64 1.5.0-4build1 [55.6 kB]
174s Get:61 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-natsort all 8.0.2-2 [33.8 kB]
174s Get:62 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-networkx all 3.2.1-4ubuntu1 [11.5 MB]
174s Get:63 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-packaging all 24.0-1 [41.1 kB]
174s Get:64 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-bcrypt arm64 4.1.2-1 [218 kB]
174s Get:65 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-paramiko all 3.4.0-1ubuntu1 [145 kB]
174s Get:66 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-setproctitle arm64 1.3.3-1build2 [18.6 kB]
174s Get:67 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-tblib all 3.0.0-5 [12.9 kB]
174s Get:68 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-typeguard all 4.1.5-1 [32.7 kB]
174s Get:69 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-py all 1.11.0-2 [72.7 kB]
174s Get:70 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-zmq arm64 24.0.1-5build1 [280 kB]
174s Get:71 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-parsl all 2024.05.27+ds-1 [274 kB]
174s Get:72 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-platformdirs all 4.2.1-1 [16.3 kB]
174s Get:73 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB]
174s Get:74 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-pytest all 7.4.4-1 [305 kB]
174s Get:75 http://ftpmaster.internal/ubuntu oracular/universe arm64 libjs-jquery-isonscreen all 1.2.0-1.1 [3244 B]
174s Get:76 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-pytest-cov all 5.0.0-1 [21.3 kB]
174s Get:77 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-setuptools all 68.1.2-2ubuntu1 [396 kB]
174s Get:78 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-skbio arm64 0.6.1-2 [1323 kB]
174s Get:79 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-tomlkit all 0.12.5-1 [37.7 kB]
174s Get:80 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-tzlocal all 5.2-1.1 [20.5 kB]
174s Get:81 http://ftpmaster.internal/ubuntu oracular/universe arm64 qiime all 2024.5.0-1ubuntu1 [312 kB]
174s Get:82 http://ftpmaster.internal/ubuntu oracular/universe arm64 q2templates all 2024.5.0+ds-1 [12.0 kB]
174s Get:83 http://ftpmaster.internal/ubuntu oracular/main arm64 libyajl2 arm64 2.1.0-5build1 [19.7 kB]
174s Get:84 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-ijson arm64 3.3.0-1 [36.7 kB]
174s Get:85 http://ftpmaster.internal/ubuntu oracular-proposed/universe arm64 q2-types all 2024.5.0-1ubuntu2 [5755 kB]
174s Get:86 http://ftpmaster.internal/ubuntu oracular/universe arm64 q2-quality-filter all 2024.5.0-1ubuntu1 [23.2 kB]
175s Fetched 65.4 MB in 3s (24.8 MB/s)
175s Selecting previously unselected package libjs-jquery.
176s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 78393 files and directories currently installed.)
176s Preparing to unpack .../00-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ...
176s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
176s Selecting previously unselected package libjs-jquery-hotkeys.
176s Preparing to unpack .../01-libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2.1_all.deb ...
176s Unpacking libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ...
176s Selecting previously unselected package fonts-glyphicons-halflings.
176s Preparing to unpack .../02-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
176s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
176s Selecting previously unselected package javascript-common.
176s Preparing to unpack .../03-javascript-common_11+nmu1_all.deb ...
176s Unpacking javascript-common (11+nmu1) ...
176s Selecting previously unselected package libaec0:arm64.
176s Preparing to unpack .../04-libaec0_1.1.3-1_arm64.deb ...
176s Unpacking libaec0:arm64 (1.1.3-1) ...
176s Selecting previously unselected package libblas3:arm64.
176s Preparing to unpack .../05-libblas3_3.12.0-3build1_arm64.deb ...
176s Unpacking libblas3:arm64 (3.12.0-3build1) ...
176s Selecting previously unselected package libgfortran5:arm64.
176s Preparing to unpack .../06-libgfortran5_14.1.0-1ubuntu1_arm64.deb ...
176s Unpacking libgfortran5:arm64 (14.1.0-1ubuntu1) ...
176s Selecting previously unselected package libgomp1:arm64.
176s Preparing to unpack .../07-libgomp1_14.1.0-1ubuntu1_arm64.deb ...
176s Unpacking libgomp1:arm64 (14.1.0-1ubuntu1) ...
176s Selecting previously unselected package libsz2:arm64.
176s Preparing to unpack .../08-libsz2_1.1.3-1_arm64.deb ...
176s Unpacking libsz2:arm64 (1.1.3-1) ...
176s Selecting previously unselected package libhdf5-103-1t64:arm64.
176s Preparing to unpack .../09-libhdf5-103-1t64_1.10.10+repack-3.1ubuntu4_arm64.deb ...
176s Unpacking libhdf5-103-1t64:arm64 (1.10.10+repack-3.1ubuntu4) ...
176s Selecting previously unselected package libhdf5-hl-100t64:arm64.
177s Preparing to unpack .../10-libhdf5-hl-100t64_1.10.10+repack-3.1ubuntu4_arm64.deb ...
177s Unpacking libhdf5-hl-100t64:arm64 (1.10.10+repack-3.1ubuntu4) ...
177s Selecting previously unselected package libjs-bootstrap.
177s Preparing to unpack .../11-libjs-bootstrap_3.4.1+dfsg-3_all.deb ...
177s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ...
177s Selecting previously unselected package libjs-jquery-metadata.
177s Preparing to unpack .../12-libjs-jquery-metadata_12-4_all.deb ...
177s Unpacking libjs-jquery-metadata (12-4) ...
177s Selecting previously unselected package libjs-jquery-tablesorter.
177s Preparing to unpack .../13-libjs-jquery-tablesorter_1%3a2.31.3+dfsg1-3_all.deb ...
177s Unpacking libjs-jquery-tablesorter (1:2.31.3+dfsg1-3) ...
177s Selecting previously unselected package libjs-jquery-throttle-debounce.
177s Preparing to unpack .../14-libjs-jquery-throttle-debounce_1.1+dfsg.1-2_all.deb ...
177s Unpacking libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ...
177s Selecting previously unselected package libjs-popper.js.
177s Preparing to unpack .../15-libjs-popper.js_1.16.1+ds-6_all.deb ...
177s Unpacking libjs-popper.js (1.16.1+ds-6) ...
177s Selecting previously unselected package libopenblas0-pthread:arm64.
177s Preparing to unpack .../16-libopenblas0-pthread_0.3.27+ds-2_arm64.deb ...
177s Unpacking libopenblas0-pthread:arm64 (0.3.27+ds-2) ...
177s Selecting previously unselected package liblapack3:arm64.
177s Preparing to unpack .../17-liblapack3_3.12.0-3build1_arm64.deb ...
177s Unpacking liblapack3:arm64 (3.12.0-3build1) ...
177s Selecting previously unselected package liblbfgsb0:arm64.
177s Preparing to unpack .../18-liblbfgsb0_3.0+dfsg.4-1build1_arm64.deb ...
177s Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ...
177s Selecting previously unselected package liblzf1:arm64.
177s Preparing to unpack .../19-liblzf1_3.6-4_arm64.deb ...
177s Unpacking liblzf1:arm64 (3.6-4) ...
177s Selecting previously unselected package libnorm1t64:arm64.
177s Preparing to unpack .../20-libnorm1t64_1.5.9+dfsg-3.1build1_arm64.deb ...
177s Unpacking libnorm1t64:arm64 (1.5.9+dfsg-3.1build1) ...
177s Selecting previously unselected package libopenblas0:arm64.
177s Preparing to unpack .../21-libopenblas0_0.3.27+ds-2_arm64.deb ...
177s Unpacking libopenblas0:arm64 (0.3.27+ds-2) ...
177s Selecting previously unselected package libpgm-5.3-0t64:arm64.
177s Preparing to unpack .../22-libpgm-5.3-0t64_5.3.128~dfsg-2.1build1_arm64.deb ...
177s Unpacking libpgm-5.3-0t64:arm64 (5.3.128~dfsg-2.1build1) ...
177s Selecting previously unselected package libsodium23:arm64.
177s Preparing to unpack .../23-libsodium23_1.0.18-1build3_arm64.deb ...
177s Unpacking libsodium23:arm64 (1.0.18-1build3) ...
177s Selecting previously unselected package libssw0:arm64.
177s Preparing to unpack .../24-libssw0_1.1-14build1_arm64.deb ...
177s Unpacking libssw0:arm64 (1.1-14build1) ...
177s Selecting previously unselected package libxslt1.1:arm64.
177s Preparing to unpack .../25-libxslt1.1_1.1.39-0exp1build1_arm64.deb ...
177s Unpacking libxslt1.1:arm64 (1.1.39-0exp1build1) ...
178s Selecting previously unselected package libzmq5:arm64.
178s Preparing to unpack .../26-libzmq5_4.3.5-1build2_arm64.deb ...
178s Unpacking libzmq5:arm64 (4.3.5-1build2) ...
178s Selecting previously unselected package node-fortawesome-fontawesome-free.
178s Preparing to unpack .../27-node-fortawesome-fontawesome-free_6.4.2+ds1-1_all.deb ...
178s Unpacking node-fortawesome-fontawesome-free (6.4.2+ds1-1) ...
178s Selecting previously unselected package node-normalize.css.
178s Preparing to unpack .../28-node-normalize.css_8.0.1-5_all.deb ...
178s Unpacking node-normalize.css (8.0.1-5) ...
178s Selecting previously unselected package python3-all.
178s Preparing to unpack .../29-python3-all_3.12.3-0ubuntu1_arm64.deb ...
178s Unpacking python3-all (3.12.3-0ubuntu1) ...
178s Selecting previously unselected package python3-bibtexparser.
178s Preparing to unpack .../30-python3-bibtexparser_2.0.0b5+really1.4.1-1_all.deb ...
178s Unpacking python3-bibtexparser (2.0.0b5+really1.4.1-1) ...
178s Selecting previously unselected package python3-numpy.
178s Preparing to unpack .../31-python3-numpy_1%3a1.26.4+ds-10_arm64.deb ...
178s Unpacking python3-numpy (1:1.26.4+ds-10) ...
178s Selecting previously unselected package python3-h5py-serial.
178s Preparing to unpack .../32-python3-h5py-serial_3.10.0-1ubuntu3_arm64.deb ...
178s Unpacking python3-h5py-serial (3.10.0-1ubuntu3) ...
178s Selecting previously unselected package python3-h5py.
179s Preparing to unpack .../33-python3-h5py_3.10.0-1ubuntu3_all.deb ...
179s Unpacking python3-h5py (3.10.0-1ubuntu3) ...
179s Selecting previously unselected package python3-colorama.
179s Preparing to unpack .../34-python3-colorama_0.4.6-4_all.deb ...
179s Unpacking python3-colorama (0.4.6-4) ...
179s Selecting previously unselected package python3-click.
179s Preparing to unpack .../35-python3-click_8.1.7-1_all.deb ...
179s Unpacking python3-click (8.1.7-1) ...
179s Selecting previously unselected package python3-dateutil.
179s Preparing to unpack .../36-python3-dateutil_2.9.0-2_all.deb ...
179s Unpacking python3-dateutil (2.9.0-2) ...
179s Selecting previously unselected package python3-pandas-lib:arm64.
179s Preparing to unpack .../37-python3-pandas-lib_2.1.4+dfsg-8_arm64.deb ...
179s Unpacking python3-pandas-lib:arm64 (2.1.4+dfsg-8) ...
179s Selecting previously unselected package python3-pandas.
179s Preparing to unpack .../38-python3-pandas_2.1.4+dfsg-8_all.deb ...
179s Unpacking python3-pandas (2.1.4+dfsg-8) ...
179s Selecting previously unselected package python3-decorator.
179s Preparing to unpack .../39-python3-decorator_5.1.1-5_all.deb ...
179s Unpacking python3-decorator (5.1.1-5) ...
179s Selecting previously unselected package python3-scipy.
179s Preparing to unpack .../40-python3-scipy_1.12.0-2_arm64.deb ...
179s Unpacking python3-scipy (1.12.0-2) ...
180s Selecting previously unselected package python3-biom-format.
180s Preparing to unpack .../41-python3-biom-format_2.1.16-1_arm64.deb ...
180s Unpacking python3-biom-format (2.1.16-1) ...
180s Selecting previously unselected package python3-coverage.
180s Preparing to unpack .../42-python3-coverage_7.4.4+dfsg1-0ubuntu2_arm64.deb ...
180s Unpacking python3-coverage (7.4.4+dfsg1-0ubuntu2) ...
180s Selecting previously unselected package python3-dill.
180s Preparing to unpack .../43-python3-dill_0.3.8-1_all.deb ...
180s Unpacking python3-dill (0.3.8-1) ...
180s Selecting previously unselected package python3-filelock.
180s Preparing to unpack .../44-python3-filelock_3.15.4-1_all.deb ...
180s Unpacking python3-filelock (3.15.4-1) ...
180s Selecting previously unselected package python3-itsdangerous.
180s Preparing to unpack .../45-python3-itsdangerous_2.2.0-1_all.deb ...
180s Unpacking python3-itsdangerous (2.2.0-1) ...
180s Selecting previously unselected package python3-werkzeug.
180s Preparing to unpack .../46-python3-werkzeug_3.0.3-1_all.deb ...
180s Unpacking python3-werkzeug (3.0.3-1) ...
180s Selecting previously unselected package python3-flask.
180s Preparing to unpack .../47-python3-flask_3.0.3-1ubuntu1_all.deb ...
180s Unpacking python3-flask (3.0.3-1ubuntu1) ...
180s Selecting previously unselected package python3-greenlet.
180s Preparing to unpack .../48-python3-greenlet_3.0.3-0ubuntu5_arm64.deb ...
180s Unpacking python3-greenlet (3.0.3-0ubuntu5) ...
180s Selecting previously unselected package python3-sqlalchemy.
180s Preparing to unpack .../49-python3-sqlalchemy_1.4.50+ds1-1build1_all.deb ...
180s Unpacking python3-sqlalchemy (1.4.50+ds1-1build1) ...
180s Selecting previously unselected package python3-flask-sqlalchemy.
180s Preparing to unpack .../50-python3-flask-sqlalchemy_3.0.3-1_all.deb ...
180s Unpacking python3-flask-sqlalchemy (3.0.3-1) ...
180s Selecting previously unselected package python3-psutil.
180s Preparing to unpack .../51-python3-psutil_5.9.8-2build2_arm64.deb ...
180s Unpacking python3-psutil (5.9.8-2build2) ...
180s Selecting previously unselected package python3-public.
181s Preparing to unpack .../52-python3-public_4.1.0-1_all.deb ...
181s Unpacking python3-public (4.1.0-1) ...
181s Selecting previously unselected package python3-flufl.lock.
181s Preparing to unpack .../53-python3-flufl.lock_8.1.0-1_all.deb ...
181s Unpacking python3-flufl.lock (8.1.0-1) ...
181s Selecting previously unselected package python3-globus-sdk.
181s Preparing to unpack .../54-python3-globus-sdk_3.41.0-1_all.deb ...
181s Unpacking python3-globus-sdk (3.41.0-1) ...
181s Selecting previously unselected package python3-hdmedians.
181s Preparing to unpack .../55-python3-hdmedians_0.14.2-5.1build1_arm64.deb ...
181s Unpacking python3-hdmedians (0.14.2-5.1build1) ...
181s Selecting previously unselected package python3-iniconfig.
181s Preparing to unpack .../56-python3-iniconfig_1.1.1-2_all.deb ...
181s Unpacking python3-iniconfig (1.1.1-2) ...
181s Selecting previously unselected package python3-lxml:arm64.
181s Preparing to unpack .../57-python3-lxml_5.2.1-1_arm64.deb ...
181s Unpacking python3-lxml:arm64 (5.2.1-1) ...
181s Selecting previously unselected package python3-nacl.
181s Preparing to unpack .../58-python3-nacl_1.5.0-4build1_arm64.deb ...
181s Unpacking python3-nacl (1.5.0-4build1) ...
181s Selecting previously unselected package python3-natsort.
181s Preparing to unpack .../59-python3-natsort_8.0.2-2_all.deb ...
181s Unpacking python3-natsort (8.0.2-2) ...
181s Selecting previously unselected package python3-networkx.
181s Preparing to unpack .../60-python3-networkx_3.2.1-4ubuntu1_all.deb ...
181s Unpacking python3-networkx (3.2.1-4ubuntu1) ...
182s Selecting previously unselected package python3-packaging.
182s Preparing to unpack .../61-python3-packaging_24.0-1_all.deb ...
182s Unpacking python3-packaging (24.0-1) ...
182s Selecting previously unselected package python3-bcrypt.
183s Preparing to unpack .../62-python3-bcrypt_4.1.2-1_arm64.deb ...
183s Unpacking python3-bcrypt (4.1.2-1) ...
183s Selecting previously unselected package python3-paramiko.
183s Preparing to unpack .../63-python3-paramiko_3.4.0-1ubuntu1_all.deb ...
183s Unpacking python3-paramiko (3.4.0-1ubuntu1) ...
183s Selecting previously unselected package python3-setproctitle:arm64.
183s Preparing to unpack .../64-python3-setproctitle_1.3.3-1build2_arm64.deb ...
183s Unpacking python3-setproctitle:arm64 (1.3.3-1build2) ...
183s Selecting previously unselected package python3-tblib.
183s Preparing to unpack .../65-python3-tblib_3.0.0-5_all.deb ...
183s Unpacking python3-tblib (3.0.0-5) ...
183s Selecting previously unselected package python3-typeguard.
183s Preparing to unpack .../66-python3-typeguard_4.1.5-1_all.deb ...
183s Unpacking python3-typeguard (4.1.5-1) ...
183s Selecting previously unselected package python3-py.
183s Preparing to unpack .../67-python3-py_1.11.0-2_all.deb ...
183s Unpacking python3-py (1.11.0-2) ...
183s Selecting previously unselected package python3-zmq.
183s Preparing to unpack .../68-python3-zmq_24.0.1-5build1_arm64.deb ...
183s Unpacking python3-zmq (24.0.1-5build1) ...
183s Selecting previously unselected package python3-parsl.
183s Preparing to unpack .../69-python3-parsl_2024.05.27+ds-1_all.deb ...
183s Unpacking python3-parsl (2024.05.27+ds-1) ...
183s Selecting previously unselected package python3-platformdirs.
184s Preparing to unpack .../70-python3-platformdirs_4.2.1-1_all.deb ...
184s Unpacking python3-platformdirs (4.2.1-1) ...
184s Selecting previously unselected package python3-pluggy.
184s Preparing to unpack .../71-python3-pluggy_1.5.0-1_all.deb ...
184s Unpacking python3-pluggy (1.5.0-1) ...
184s Selecting previously unselected package python3-pytest.
184s Preparing to unpack .../72-python3-pytest_7.4.4-1_all.deb ...
184s Unpacking python3-pytest (7.4.4-1) ...
184s Selecting previously unselected package libjs-jquery-isonscreen.
184s Preparing to unpack .../73-libjs-jquery-isonscreen_1.2.0-1.1_all.deb ...
184s Unpacking libjs-jquery-isonscreen (1.2.0-1.1) ...
184s Selecting previously unselected package python3-pytest-cov.
184s Preparing to unpack .../74-python3-pytest-cov_5.0.0-1_all.deb ...
184s Unpacking python3-pytest-cov (5.0.0-1) ...
184s Selecting previously unselected package python3-setuptools.
184s Preparing to unpack .../75-python3-setuptools_68.1.2-2ubuntu1_all.deb ...
184s Unpacking python3-setuptools (68.1.2-2ubuntu1) ...
184s Selecting previously unselected package python3-skbio.
184s Preparing to unpack .../76-python3-skbio_0.6.1-2_arm64.deb ...
184s Unpacking python3-skbio (0.6.1-2) ...
184s Selecting previously unselected package python3-tomlkit.
184s Preparing to unpack .../77-python3-tomlkit_0.12.5-1_all.deb ...
184s Unpacking python3-tomlkit (0.12.5-1) ...
184s Selecting previously unselected package python3-tzlocal.
184s Preparing to unpack .../78-python3-tzlocal_5.2-1.1_all.deb ...
184s Unpacking python3-tzlocal (5.2-1.1) ...
184s Selecting previously unselected package qiime.
184s Preparing to unpack .../79-qiime_2024.5.0-1ubuntu1_all.deb ...
184s Unpacking qiime (2024.5.0-1ubuntu1) ...
184s Selecting previously unselected package q2templates.
184s Preparing to unpack .../80-q2templates_2024.5.0+ds-1_all.deb ...
184s Unpacking q2templates (2024.5.0+ds-1) ...
184s Selecting previously unselected package libyajl2:arm64.
184s Preparing to unpack .../81-libyajl2_2.1.0-5build1_arm64.deb ...
184s Unpacking libyajl2:arm64 (2.1.0-5build1) ...
184s Selecting previously unselected package python3-ijson.
184s Preparing to unpack .../82-python3-ijson_3.3.0-1_arm64.deb ...
184s Unpacking python3-ijson (3.3.0-1) ...
184s Selecting previously unselected package q2-types.
184s Preparing to unpack .../83-q2-types_2024.5.0-1ubuntu2_all.deb ...
184s Unpacking q2-types (2024.5.0-1ubuntu2) ...
185s Selecting previously unselected package q2-quality-filter.
185s Preparing to unpack .../84-q2-quality-filter_2024.5.0-1ubuntu1_all.deb ...
185s Unpacking q2-quality-filter (2024.5.0-1ubuntu1) ...
185s Selecting previously unselected package autopkgtest-satdep.
185s Preparing to unpack .../85-1-autopkgtest-satdep.deb ...
185s Unpacking autopkgtest-satdep (0) ...
185s Setting up javascript-common (11+nmu1) ...
185s Setting up python3-iniconfig (1.1.1-2) ...
185s Setting up libnorm1t64:arm64 (1.5.9+dfsg-3.1build1) ...
185s Setting up python3-filelock (3.15.4-1) ...
185s Setting up libsodium23:arm64 (1.0.18-1build3) ...
185s Setting up python3-setuptools (68.1.2-2ubuntu1) ...
186s Setting up python3-tblib (3.0.0-5) ...
186s Setting up python3-py (1.11.0-2) ...
186s Setting up libjs-popper.js (1.16.1+ds-6) ...
186s Setting up python3-colorama (0.4.6-4) ...
186s Setting up python3-public (4.1.0-1) ...
186s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
186s Setting up python3-bcrypt (4.1.2-1) ...
186s Setting up python3-typeguard (4.1.5-1) ...
187s Setting up libyajl2:arm64 (2.1.0-5build1) ...
187s Setting up python3-itsdangerous (2.2.0-1) ...
187s Setting up python3-all (3.12.3-0ubuntu1) ...
187s Setting up python3-coverage (7.4.4+dfsg1-0ubuntu2) ...
187s Setting up node-fortawesome-fontawesome-free (6.4.2+ds1-1) ...
187s Setting up libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ...
187s Setting up libgomp1:arm64 (14.1.0-1ubuntu1) ...
187s Setting up python3-click (8.1.7-1) ...
187s Setting up python3-networkx (3.2.1-4ubuntu1) ...
189s Setting up libaec0:arm64 (1.1.3-1) ...
189s Setting up python3-platformdirs (4.2.1-1) ...
189s Setting up python3-psutil (5.9.8-2build2) ...
189s Setting up python3-natsort (8.0.2-2) ...
189s Setting up python3-flufl.lock (8.1.0-1) ...
189s Setting up libpgm-5.3-0t64:arm64 (5.3.128~dfsg-2.1build1) ...
189s Setting up python3-decorator (5.1.1-5) ...
189s Setting up libblas3:arm64 (3.12.0-3build1) ...
189s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
189s Setting up python3-packaging (24.0-1) ...
190s Setting up python3-dill (0.3.8-1) ...
190s Setting up liblzf1:arm64 (3.6-4) ...
190s Setting up python3-greenlet (3.0.3-0ubuntu5) ...
190s Setting up python3-setproctitle:arm64 (1.3.3-1build2) ...
190s Setting up libgfortran5:arm64 (14.1.0-1ubuntu1) ...
190s Setting up python3-pluggy (1.5.0-1) ...
190s Setting up libxslt1.1:arm64 (1.1.39-0exp1build1) ...
190s Setting up python3-dateutil (2.9.0-2) ...
191s Setting up python3-bibtexparser (2.0.0b5+really1.4.1-1) ...
191s /usr/lib/python3/dist-packages/bibtexparser/latexenc.py:93: SyntaxWarning: invalid escape sequence '\g'
191s   string = re.sub('([^{]|^)([A-Z])([^}]|$)', '\g<1>{\g<2>}\g<3>', string)
191s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
191s Setting up python3-tzlocal (5.2-1.1) ...
191s Setting up libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ...
191s Setting up python3-tomlkit (0.12.5-1) ...
191s Setting up node-normalize.css (8.0.1-5) ...
191s Setting up libssw0:arm64 (1.1-14build1) ...
191s Setting up python3-nacl (1.5.0-4build1) ...
192s Setting up python3-globus-sdk (3.41.0-1) ...
192s Setting up libsz2:arm64 (1.1.3-1) ...
192s Setting up libjs-bootstrap (3.4.1+dfsg-3) ...
192s Setting up liblapack3:arm64 (3.12.0-3build1) ...
192s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
192s Setting up libopenblas0-pthread:arm64 (0.3.27+ds-2) ...
192s update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
192s update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
192s update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/aarch64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-aarch64-linux-gnu) in auto mode
192s Setting up libzmq5:arm64 (4.3.5-1build2) ...
192s Setting up python3-ijson (3.3.0-1) ...
192s Setting up python3-pytest (7.4.4-1) ...
192s Setting up python3-sqlalchemy (1.4.50+ds1-1build1) ...
194s Setting up python3-werkzeug (3.0.3-1) ...
194s Setting up python3-zmq (24.0.1-5build1) ...
194s Setting up libjs-jquery-metadata (12-4) ...
194s Setting up libjs-jquery-isonscreen (1.2.0-1.1) ...
194s Setting up python3-numpy (1:1.26.4+ds-10) ...
196s Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-3) ...
196s Setting up python3-hdmedians (0.14.2-5.1build1) ...
196s Setting up libopenblas0:arm64 (0.3.27+ds-2) ...
196s Setting up python3-lxml:arm64 (5.2.1-1) ...
196s Setting up python3-paramiko (3.4.0-1ubuntu1) ...
197s Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-3.1ubuntu4) ...
197s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ...
197s Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-3.1ubuntu4) ...
197s Setting up python3-scipy (1.12.0-2) ...
200s Setting up python3-flask (3.0.3-1ubuntu1) ...
200s Setting up python3-pandas-lib:arm64 (2.1.4+dfsg-8) ...
200s Setting up python3-h5py-serial (3.10.0-1ubuntu3) ...
201s Setting up python3-pytest-cov (5.0.0-1) ...
201s Setting up python3-pandas (2.1.4+dfsg-8) ...
206s Setting up python3-h5py (3.10.0-1ubuntu3) ...
206s Setting up python3-flask-sqlalchemy (3.0.3-1) ...
206s Setting up q2templates (2024.5.0+ds-1) ...
206s Setting up python3-parsl (2024.05.27+ds-1) ...
206s Setting up qiime (2024.5.0-1ubuntu1) ...
207s Setting up python3-biom-format (2.1.16-1) ...
207s Setting up python3-skbio (0.6.1-2) ...
208s Setting up q2-types (2024.5.0-1ubuntu2) ...
208s Setting up q2-quality-filter (2024.5.0-1ubuntu1) ...
208s Setting up autopkgtest-satdep (0) ...
208s Processing triggers for man-db (2.12.1-2) ...
209s Processing triggers for libc-bin (2.39-0ubuntu9) ...
216s (Reading database ... 93107 files and directories currently installed.)
216s Removing autopkgtest-satdep (0) ...
217s autopkgtest [09:59:58]: test run-unit-test: [-----------------------
217s /tmp/autopkgtest.wVPzL0/build.DS2/src/debian/tests/run-unit-test: line 26: python3.11: command not found
218s autopkgtest [09:59:59]: test run-unit-test: -----------------------]
218s autopkgtest [09:59:59]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
218s run-unit-test        FAIL non-zero exit status 127
218s autopkgtest [09:59:59]: @@@@@@@@@@@@@@@@@@@@ summary
218s run-unit-test        FAIL non-zero exit status 127
232s nova [W] Skipping flock in bos03-arm64
232s Creating nova instance adt-oracular-arm64-q2-quality-filter-20240711-095621-juju-7f2275-prod-proposed-migration-environment-3-a703e774-fce6-477b-900a-676e33a7d2fb from image adt/ubuntu-oracular-arm64-server-20240711.img (UUID 7b9b87cc-b50d-4483-ba73-7d7404fab5cf)...