0s autopkgtest [21:15:23]: starting date and time: 2024-07-15 21:15:23+0000
  0s autopkgtest [21:15:23]: git checkout: fd3bed09 nova: allow more retries for quota issues
  0s autopkgtest [21:15:23]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.5cb01zol/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:boost-defaults --apt-upgrade gudhi --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=boost-defaults/1.83.0.2ubuntu1 -- lxd -r lxd-armhf-10.145.243.27 lxd-armhf-10.145.243.27:autopkgtest/ubuntu/oracular/armhf
 60s autopkgtest [21:16:23]: testbed dpkg architecture: armhf
 62s autopkgtest [21:16:25]: testbed apt version: 2.9.6
 62s autopkgtest [21:16:25]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 69s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB]
 70s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [359 kB]
 70s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B]
 70s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [41.5 kB]
 70s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [3840 B]
 70s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf Packages [96.3 kB]
 70s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf c-n-f Metadata [1428 B]
 70s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/restricted armhf Packages [1368 B]
 70s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted armhf c-n-f Metadata [120 B]
 70s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe armhf Packages [313 kB]
 70s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/universe armhf c-n-f Metadata [6916 B]
 70s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse armhf Packages [1448 B]
 70s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse armhf c-n-f Metadata [120 B]
 72s Fetched 960 kB in 1s (1252 kB/s)
 72s Reading package lists...
 89s tee: /proc/self/fd/2: Permission denied
111s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease
111s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease
111s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease
111s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease
112s Reading package lists...
112s Reading package lists...
113s Building dependency tree...
113s Reading state information...
113s Calculating upgrade...
114s The following packages will be upgraded:
114s   gcc-14-base libgcc-s1 libstdc++6 powermgmt-base
114s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
114s Need to get 808 kB of archives.
114s After this operation, 4096 B disk space will be freed.
114s Get:1 http://ftpmaster.internal/ubuntu oracular/main armhf gcc-14-base armhf 14.1.0-4ubuntu2 [49.6 kB]
114s Get:2 http://ftpmaster.internal/ubuntu oracular/main armhf libstdc++6 armhf 14.1.0-4ubuntu2 [711 kB]
114s Get:3 http://ftpmaster.internal/ubuntu oracular/main armhf libgcc-s1 armhf 14.1.0-4ubuntu2 [40.8 kB]
114s Get:4 http://ftpmaster.internal/ubuntu oracular/main armhf powermgmt-base all 1.37+nmu1 [6928 B]
115s Fetched 808 kB in 1s (1427 kB/s)
115s (Reading database ... 
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(Reading database ... 58436 files and directories currently installed.)
115s Preparing to unpack .../gcc-14-base_14.1.0-4ubuntu2_armhf.deb ...
115s Unpacking gcc-14-base:armhf (14.1.0-4ubuntu2) over (14.1.0-1ubuntu1) ...
115s Setting up gcc-14-base:armhf (14.1.0-4ubuntu2) ...
115s (Reading database ... 
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(Reading database ... 58436 files and directories currently installed.)
115s Preparing to unpack .../libstdc++6_14.1.0-4ubuntu2_armhf.deb ...
115s Unpacking libstdc++6:armhf (14.1.0-4ubuntu2) over (14.1.0-1ubuntu1) ...
115s Setting up libstdc++6:armhf (14.1.0-4ubuntu2) ...
115s (Reading database ... 
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(Reading database ... 58436 files and directories currently installed.)
115s Preparing to unpack .../libgcc-s1_14.1.0-4ubuntu2_armhf.deb ...
115s Unpacking libgcc-s1:armhf (14.1.0-4ubuntu2) over (14.1.0-1ubuntu1) ...
115s Setting up libgcc-s1:armhf (14.1.0-4ubuntu2) ...
115s (Reading database ... 
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(Reading database ... 95%
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(Reading database ... 58436 files and directories currently installed.)
115s Preparing to unpack .../powermgmt-base_1.37+nmu1_all.deb ...
115s Unpacking powermgmt-base (1.37+nmu1) over (1.37) ...
115s Setting up powermgmt-base (1.37+nmu1) ...
115s Processing triggers for man-db (2.12.1-2) ...
116s Processing triggers for libc-bin (2.39-0ubuntu9) ...
116s Reading package lists...
116s Building dependency tree...
116s Reading state information...
117s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
119s autopkgtest [21:17:22]: rebooting testbed after setup commands that affected boot
188s autopkgtest [21:18:31]: testbed running kernel: Linux 6.5.0-41-generic #41~22.04.2-Ubuntu SMP PREEMPT_DYNAMIC Mon Jun  3 16:28:24 UTC 2
215s autopkgtest [21:18:58]: @@@@@@@@@@@@@@@@@@@@ apt-source gudhi
234s Get:1 http://ftpmaster.internal/ubuntu oracular/universe gudhi 3.10.1+dfsg-1 (dsc) [3273 B]
234s Get:2 http://ftpmaster.internal/ubuntu oracular/universe gudhi 3.10.1+dfsg-1 (tar) [17.8 MB]
234s Get:3 http://ftpmaster.internal/ubuntu oracular/universe gudhi 3.10.1+dfsg-1 (diff) [11.5 kB]
234s gpgv: Signature made Thu Jul  4 13:27:51 2024 UTC
234s gpgv:                using RSA key CFC5EF8510851E7355B55E809D11582AFD548CFA
234s gpgv:                issuer "gspr@nonempty.org"
234s gpgv: Can't check signature: No public key
234s dpkg-source: warning: cannot verify inline signature for ./gudhi_3.10.1+dfsg-1.dsc: no acceptable signature found
235s autopkgtest [21:19:18]: testing package gudhi version 3.10.1+dfsg-1
237s autopkgtest [21:19:20]: build not needed
241s autopkgtest [21:19:24]: test python-upstream.sh: preparing testbed
251s Reading package lists...
251s Building dependency tree...
251s Reading state information...
252s Starting pkgProblemResolver with broken count: 1
252s Starting 2 pkgProblemResolver with broken count: 1
252s Investigating (0) autopkgtest-satdep:armhf < none -> 0 @un puN Ib >
252s Broken autopkgtest-satdep:armhf Depends on python3-all:armhf < none | 3.12.3-0ubuntu1 @un uH >
252s   Considering python3-all:armhf 1 as a solution to autopkgtest-satdep:armhf 9998
252s   Re-Instated python3-all:armhf
252s Broken autopkgtest-satdep:armhf Depends on python3-eagerpy:armhf < none | 0.30.0-3 @un uH >
252s   Considering python3-eagerpy:armhf 1 as a solution to autopkgtest-satdep:armhf 9998
252s   Re-Instated libblas3:armhf
252s   Re-Instated libgfortran5:armhf
252s   Re-Instated liblapack3:armhf
252s   Re-Instated python3-numpy:armhf
252s   Re-Instated python3-eagerpy:armhf
252s Broken autopkgtest-satdep:armhf Depends on python3-gudhi:armhf < none @un H >
252s Broken autopkgtest-satdep:armhf Depends on python3-matplotlib:armhf < none | 3.6.3-2ubuntu1 @un uH >
252s   Considering python3-matplotlib:armhf 1 as a solution to autopkgtest-satdep:armhf 9998
252s   Re-Instated libjs-jquery:armhf
252s   Re-Instated libjs-jquery-ui:armhf
252s   Re-Instated fonts-dejavu-mono:armhf
252s   Re-Instated fonts-dejavu-core:armhf
252s   Re-Instated fonts-lyx:armhf
252s   Re-Instated python-matplotlib-data:armhf
252s   Re-Instated python3-dateutil:armhf
252s   Re-Instated libfreetype6:armhf
252s   Re-Instated libgomp1:armhf
252s   Re-Instated libimagequant0:armhf
252s   Re-Instated libjpeg-turbo8:armhf
252s   Re-Instated libjpeg8:armhf
252s   Re-Instated liblcms2-2:armhf
252s   Re-Instated libopenjp2-7:armhf
252s   Re-Instated libgraphite2-3:armhf
252s   Re-Instated libharfbuzz0b:armhf
252s   Re-Instated libraqm0:armhf
252s   Re-Instated libdeflate0:armhf
252s   Re-Instated libjbig0:armhf
252s   Re-Instated liblerc4:armhf
252s   Re-Instated libsharpyuv0:armhf
252s   Re-Instated libwebp7:armhf
252s   Re-Instated libtiff6:armhf
252s   Re-Instated libwebpdemux2:armhf
252s   Re-Instated libwebpmux3:armhf
252s   Re-Instated python3-pil:armhf
252s   Re-Instated libtcl8.6:armhf
252s   Re-Instated fontconfig-config:armhf
252s   Re-Instated libfontconfig1:armhf
252s   Re-Instated libxrender1:armhf
252s   Re-Instated libxft2:armhf
252s   Re-Instated x11-common:armhf
252s   Re-Instated libxss1:armhf
252s   Re-Instated libtk8.6:armhf
252s   Re-Instated tk8.6-blt2.5:armhf
252s   Re-Instated blt:armhf
252s   Re-Instated python3-tk:armhf
252s   Re-Instated python3-pil.imagetk:armhf
252s   Re-Instated python3-contourpy:armhf
252s   Re-Instated python3-cycler:armhf
252s   Re-Instated python3-brotli:armhf
252s   Re-Instated python3-decorator:armhf
252s   Re-Instated liblbfgsb0:armhf
252s   Re-Instated python3-scipy:armhf
252s   Re-Instated python3-ufolib2:armhf
252s   Re-Instated python3-mpmath:armhf
252s   Re-Instated python3-sympy:armhf
252s   Re-Instated python3-tz:armhf
252s   Re-Instated python3-appdirs:armhf
252s   Re-Instated python3-fs:armhf
252s   Re-Instated libxslt1.1:armhf
252s   Re-Instated python3-lxml:armhf
252s   Re-Instated python3-lz4:armhf
252s   Re-Instated unicode-data:armhf
252s   Re-Instated python3-fonttools:armhf
252s   Re-Instated python3-kiwisolver:armhf
252s   Re-Instated python3-packaging:armhf
252s   Re-Instated libqhull-r8.0:armhf
252s   Re-Instated python3-matplotlib:armhf
252s Broken autopkgtest-satdep:armhf Depends on python3-pot:armhf < none | 0.9.3+dfsg-2 @un uH >
252s   Considering python3-pot:armhf 1 as a solution to autopkgtest-satdep:armhf 9998
252s   Re-Instated python3-pot:armhf
252s Broken autopkgtest-satdep:armhf Depends on python3-pytest:armhf < none | 7.4.4-1 @un uH >
252s   Considering python3-pytest:armhf 1 as a solution to autopkgtest-satdep:armhf 9998
252s   Re-Instated python3-iniconfig:armhf
252s   Re-Instated python3-pluggy:armhf
252s   Re-Instated python3-pytest:armhf
252s Broken autopkgtest-satdep:armhf Depends on python3-sklearn:armhf < none | 1.4.2+dfsg-3 @un uH >
252s   Considering python3-sklearn:armhf 1 as a solution to autopkgtest-satdep:armhf 9998
252s   Re-Instated python3-joblib:armhf
252s   Re-Instated python3-threadpoolctl:armhf
252s   Re-Instated python3-sklearn-lib:armhf
252s   Re-Instated python3-sklearn:armhf
252s Done
252s Some packages could not be installed. This may mean that you have
252s requested an impossible situation or if you are using the unstable
252s distribution that some required packages have not yet been created
252s or been moved out of Incoming.
252s The following information may help to resolve the situation:
252s 
252s The following packages have unmet dependencies:
252s  autopkgtest-satdep : Depends: python3-gudhi but it is not installable
252s E: Unable to correct problems, you have held broken packages.
252s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from oracular-proposed
258s Reading package lists...
258s Building dependency tree...
258s Reading state information...
258s Starting pkgProblemResolver with broken count: 1
258s Starting 2 pkgProblemResolver with broken count: 1
258s Investigating (0) autopkgtest-satdep:armhf < none -> 0 @un puN Ib >
258s Broken autopkgtest-satdep:armhf Depends on python3-all:armhf < none | 3.12.3-0ubuntu1 @un uH >
258s   Considering python3-all:armhf 1 as a solution to autopkgtest-satdep:armhf 9998
258s   Re-Instated python3-all:armhf
258s Broken autopkgtest-satdep:armhf Depends on python3-eagerpy:armhf < none | 0.30.0-3 @un uH >
258s   Considering python3-eagerpy:armhf 1 as a solution to autopkgtest-satdep:armhf 9998
258s   Re-Instated libblas3:armhf
258s   Re-Instated libgfortran5:armhf
258s   Re-Instated liblapack3:armhf
258s   Re-Instated python3-numpy:armhf
258s   Re-Instated python3-eagerpy:armhf
258s Broken autopkgtest-satdep:armhf Depends on python3-gudhi:armhf < none @un H >
258s Broken autopkgtest-satdep:armhf Depends on python3-matplotlib:armhf < none | 3.6.3-2ubuntu1 @un uH >
258s   Considering python3-matplotlib:armhf 1 as a solution to autopkgtest-satdep:armhf 9998
258s   Re-Instated libjs-jquery:armhf
258s   Re-Instated libjs-jquery-ui:armhf
258s   Re-Instated fonts-dejavu-mono:armhf
258s   Re-Instated fonts-dejavu-core:armhf
258s   Re-Instated fonts-lyx:armhf
258s   Re-Instated python-matplotlib-data:armhf
258s   Re-Instated python3-dateutil:armhf
258s   Re-Instated libfreetype6:armhf
258s   Re-Instated libgomp1:armhf
258s   Re-Instated libimagequant0:armhf
258s   Re-Instated libjpeg-turbo8:armhf
258s   Re-Instated libjpeg8:armhf
258s   Re-Instated liblcms2-2:armhf
258s   Re-Instated libopenjp2-7:armhf
258s   Re-Instated libgraphite2-3:armhf
258s   Re-Instated libharfbuzz0b:armhf
258s   Re-Instated libraqm0:armhf
258s   Re-Instated libdeflate0:armhf
258s   Re-Instated libjbig0:armhf
258s   Re-Instated liblerc4:armhf
258s   Re-Instated libsharpyuv0:armhf
258s   Re-Instated libwebp7:armhf
258s   Re-Instated libtiff6:armhf
258s   Re-Instated libwebpdemux2:armhf
258s   Re-Instated libwebpmux3:armhf
258s   Re-Instated python3-pil:armhf
258s   Re-Instated libtcl8.6:armhf
258s   Re-Instated fontconfig-config:armhf
258s   Re-Instated libfontconfig1:armhf
258s   Re-Instated libxrender1:armhf
258s   Re-Instated libxft2:armhf
258s   Re-Instated x11-common:armhf
258s   Re-Instated libxss1:armhf
258s   Re-Instated libtk8.6:armhf
258s   Re-Instated tk8.6-blt2.5:armhf
258s   Re-Instated blt:armhf
258s   Re-Instated python3-tk:armhf
258s   Re-Instated python3-pil.imagetk:armhf
258s   Re-Instated python3-contourpy:armhf
258s   Re-Instated python3-cycler:armhf
258s   Re-Instated python3-brotli:armhf
258s   Re-Instated python3-decorator:armhf
258s   Re-Instated liblbfgsb0:armhf
258s   Re-Instated python3-scipy:armhf
258s   Re-Instated python3-ufolib2:armhf
258s   Re-Instated python3-mpmath:armhf
258s   Re-Instated python3-sympy:armhf
258s   Re-Instated python3-tz:armhf
258s   Re-Instated python3-appdirs:armhf
258s   Re-Instated python3-fs:armhf
258s   Re-Instated libxslt1.1:armhf
258s   Re-Instated python3-lxml:armhf
258s   Re-Instated python3-lz4:armhf
258s   Re-Instated unicode-data:armhf
258s   Re-Instated python3-fonttools:armhf
258s   Re-Instated python3-kiwisolver:armhf
258s   Re-Instated python3-packaging:armhf
258s   Re-Instated libqhull-r8.0:armhf
258s   Re-Instated python3-matplotlib:armhf
258s Broken autopkgtest-satdep:armhf Depends on python3-pot:armhf < none | 0.9.3+dfsg-2 @un uH >
258s   Considering python3-pot:armhf 1 as a solution to autopkgtest-satdep:armhf 9998
258s   Re-Instated python3-pot:armhf
258s Broken autopkgtest-satdep:armhf Depends on python3-pytest:armhf < none | 8.2.2-1ubuntu1 @un uH >
258s   Considering python3-pytest:armhf 1 as a solution to autopkgtest-satdep:armhf 9998
258s   Re-Instated python3-iniconfig:armhf
258s   Re-Instated python3-pluggy:armhf
258s   Re-Instated python3-pytest:armhf
258s Broken autopkgtest-satdep:armhf Depends on python3-sklearn:armhf < none | 1.4.2+dfsg-3 @un uH >
258s   Considering python3-sklearn:armhf 1 as a solution to autopkgtest-satdep:armhf 9998
258s   Re-Instated python3-joblib:armhf
258s   Re-Instated python3-threadpoolctl:armhf
258s   Re-Instated python3-sklearn-lib:armhf
258s   Re-Instated python3-sklearn:armhf
258s Done
258s Some packages could not be installed. This may mean that you have
258s requested an impossible situation or if you are using the unstable
258s distribution that some required packages have not yet been created
258s or been moved out of Incoming.
258s The following information may help to resolve the situation:
258s 
258s The following packages have unmet dependencies:
259s  autopkgtest-satdep : Depends: python3-gudhi but it is not installable
259s E: Unable to correct problems, you have held broken packages.
259s autopkgtest: WARNING: Test dependencies are unsatisfiable - calling apt install on test deps directly for further data about failing dependencies in test logs
261s Reading package lists...
261s Building dependency tree...
261s Reading state information...
261s E: Unable to locate package python3-gudhi
261s python-upstream.sh   FAIL badpkg
261s blame: gudhi
261s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U.
261s autopkgtest [21:19:44]: @@@@@@@@@@@@@@@@@@@@ summary
261s python-upstream.sh   FAIL badpkg
261s blame: gudhi
261s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U.