0s autopkgtest [14:11:59]: starting date and time: 2024-08-07 14:11:59+0000
  0s autopkgtest [14:11:59]: git checkout: fd3bed09 nova: allow more retries for quota issues
  0s autopkgtest [14:11:59]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.v47zxkdm/out --timeout-copy=6000 -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:ncbi-blast+ --apt-upgrade cct --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=ncbi-blast+/2.16.0+ds-6 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@lcy02-33.secgroup --name adt-oracular-i386-cct-20240807-141157-juju-7f2275-prod-proposed-migration-environment-3-1e2a1463-f336-4247-b109-0be1359debcc --image adt/ubuntu-oracular-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
138s autopkgtest [14:14:17]: testbed dpkg architecture: amd64
138s autopkgtest [14:14:17]: testbed apt version: 2.9.7
139s autopkgtest [14:14:18]: test architecture: i386
139s autopkgtest [14:14:18]: @@@@@@@@@@@@@@@@@@@@ test bed setup
139s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB]
140s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [10.1 kB]
140s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [620 kB]
140s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [74.6 kB]
140s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [8756 B]
140s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main amd64 Packages [155 kB]
140s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main i386 Packages [115 kB]
140s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/main amd64 c-n-f Metadata [3920 B]
140s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted i386 Packages [12.4 kB]
140s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/restricted amd64 Packages [35.0 kB]
140s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/restricted amd64 c-n-f Metadata [368 B]
140s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/universe i386 Packages [341 kB]
140s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 Packages [723 kB]
140s Get:14 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 c-n-f Metadata [22.4 kB]
140s Get:15 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse i386 Packages [4040 B]
140s Get:16 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse amd64 Packages [12.0 kB]
140s Get:17 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse amd64 c-n-f Metadata [552 B]
141s Fetched 2264 kB in 0s (5280 kB/s)
141s Reading package lists...
143s Reading package lists...
144s Building dependency tree...
144s Reading state information...
144s Calculating upgrade...
144s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
145s Reading package lists...
145s Building dependency tree...
145s Reading state information...
145s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
146s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease
146s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease
146s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease
146s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease
147s Reading package lists...
147s Reading package lists...
147s Building dependency tree...
147s Reading state information...
148s Calculating upgrade...
148s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
148s Reading package lists...
148s Building dependency tree...
148s Reading state information...
149s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
151s autopkgtest [14:14:30]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP PREEMPT_DYNAMIC Sat Apr 20 00:40:06 UTC 2024
151s autopkgtest [14:14:30]: @@@@@@@@@@@@@@@@@@@@ apt-source cct
155s Get:1 http://ftpmaster.internal/ubuntu oracular/universe cct 1:1.0.3-1 (dsc) [1997 B]
155s Get:2 http://ftpmaster.internal/ubuntu oracular/universe cct 1:1.0.3-1 (tar) [81.7 MB]
155s Get:3 http://ftpmaster.internal/ubuntu oracular/universe cct 1:1.0.3-1 (diff) [11.7 kB]
155s gpgv: Signature made Sun Jan 16 15:11:18 2022 UTC
155s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
155s gpgv:                issuer "tille@debian.org"
155s gpgv: Can't check signature: No public key
155s dpkg-source: warning: cannot verify inline signature for ./cct_1.0.3-1.dsc: no acceptable signature found
158s autopkgtest [14:14:37]: testing package cct version 1:1.0.3-1
158s autopkgtest [14:14:37]: build not needed
160s autopkgtest [14:14:39]: test run-unit-test: preparing testbed
165s Note, using file '/tmp/autopkgtest.u5MCoM/1-autopkgtest-satdep.dsc' to get the build dependencies
165s Reading package lists...
165s Building dependency tree...
165s Reading state information...
165s Starting pkgProblemResolver with broken count: 0
165s Starting 2 pkgProblemResolver with broken count: 0
165s Done
166s The following NEW packages will be installed:
166s   adwaita-icon-theme at-spi2-common bioperl build-essential
166s   ca-certificates-java cct cct-examples cgview cpp cpp-14
166s   cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu dconf-gsettings-backend
166s   dconf-service default-jre default-jre-headless fontconfig g++ g++-14
166s   g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14
166s   gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gtk-update-icon-cache
166s   hicolor-icon-theme humanity-icon-theme imagemagick imagemagick-6-common
166s   imagemagick-6.q16 java-common java-wrappers libalgorithm-diff-perl
166s   libapache-pom-java libasan8 libasound2-data libasound2t64
166s   libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3
166s   libavahi-common-data libavahi-common3 libbatik-java libbio-perl-perl
166s   libcairo-gobject2 libcairo2 libcapture-tiny-perl libcc1-0
166s   libclass-data-inheritable-perl libclone-perl libcolord2 libcommons-io-java
166s   libcommons-lang-java libcommons-logging-java libcommons-parent-java
166s   libcups2t64 libdata-stag-perl libdatrie1 libdconf1 libdevel-stacktrace-perl
166s   libdrm-amdgpu1 libdrm-intel1 libdrm-nouveau2 libdrm-radeon1
166s   libencode-locale-perl libepoxy0 liberror-perl libexception-class-perl
166s   libfftw3-double3 libfile-listing-perl libgcc-14-dev libgdk-pixbuf-2.0-0
166s   libgdk-pixbuf2.0-common libgif7 libgl1 libgl1-mesa-dri libglapi-mesa
166s   libglvnd0 libglx-mesa0 libglx0 libgtk-3-0t64 libgtk-3-common
166s   libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl
166s   libhttp-cookies-perl libhttp-date-perl libhttp-message-perl
166s   libhttp-negotiate-perl libhwasan0 libio-html-perl libio-socket-ssl-perl
166s   libio-string-perl libisl23 libitm1 libjargs-java libjaxp1.3-java liblcms2-2
166s   libllvm17t64 liblqr-1-0 liblsan0 libltdl7 liblwp-mediatypes-perl
166s   liblwp-protocol-https-perl libmagickcore-6.q16-7t64 libmagickwand-6.q16-7t64
166s   libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 libmpc3 libnet-http-perl
166s   libnet-ssleay-perl libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0
166s   libpangoft2-1.0-0 libpciaccess0 libpcsclite1 libpixman-1-0 libquadmath0
166s   libraw23t64 libstdc++-14-dev libsub-uplevel-perl libtest-deep-perl
166s   libtest-differences-perl libtest-exception-perl libtest-most-perl
166s   libtest-warn-perl libtext-diff-perl libthai-data libthai0 libtie-ixhash-perl
166s   libtimedate-perl libtry-tiny-perl libtsan2 libubsan1 liburi-perl libvulkan1
166s   libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebpdemux2
166s   libwebpmux3 libwww-perl libwww-robotrules-perl libx11-xcb1 libxcb-dri2-0
166s   libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0
166s   libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcomposite1 libxcursor1
166s   libxdamage1 libxerces2-java libxfixes3 libxi6 libxinerama1
166s   libxml-commons-external-java libxml-commons-resolver1.1-java
166s   libxmlgraphics-commons-java libxrandr2 libxrender1 libxshmfence1 libxtst6
166s   libxxf86vm1 ncbi-blast+ ncbi-blast+-legacy ncbi-data openjdk-21-jre
166s   openjdk-21-jre-headless perl-openssl-defaults ubuntu-mono unzip x11-common
166s 0 upgraded, 181 newly installed, 0 to remove and 0 not upgraded.
166s Need to get 276 MB of archives.
166s After this operation, 930 MB of additional disk space will be used.
166s Get:1 http://ftpmaster.internal/ubuntu oracular/main amd64 libfftw3-double3 amd64 3.3.10-1ubuntu4 [839 kB]
166s Get:2 http://ftpmaster.internal/ubuntu oracular/main amd64 liblcms2-2 amd64 2.14-2build1 [161 kB]
166s Get:3 http://ftpmaster.internal/ubuntu oracular/universe amd64 liblqr-1-0 amd64 0.4.2-2.1build2 [28.5 kB]
166s Get:4 http://ftpmaster.internal/ubuntu oracular/main amd64 libltdl7 amd64 2.4.7-7build1 [40.3 kB]
166s Get:5 http://ftpmaster.internal/ubuntu oracular/main amd64 libopenjp2-7 amd64 2.5.0-2build3 [173 kB]
166s Get:6 http://ftpmaster.internal/ubuntu oracular/main amd64 libraw23t64 amd64 0.21.2-2.1build1 [378 kB]
166s Get:7 http://ftpmaster.internal/ubuntu oracular/main amd64 libwebpdemux2 amd64 1.4.0-0.1 [12.4 kB]
166s Get:8 http://ftpmaster.internal/ubuntu oracular/main amd64 libwebpmux3 amd64 1.4.0-0.1 [25.8 kB]
166s Get:9 http://ftpmaster.internal/ubuntu oracular/universe amd64 imagemagick-6-common all 8:6.9.13.12+dfsg1-1 [69.5 kB]
166s Get:10 http://ftpmaster.internal/ubuntu oracular/universe amd64 libmagickcore-6.q16-7t64 amd64 8:6.9.13.12+dfsg1-1 [1821 kB]
166s Get:11 http://ftpmaster.internal/ubuntu oracular/universe amd64 libmagickwand-6.q16-7t64 amd64 8:6.9.13.12+dfsg1-1 [316 kB]
166s Get:12 http://ftpmaster.internal/ubuntu oracular/main amd64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [7888 B]
166s Get:13 http://ftpmaster.internal/ubuntu oracular/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.12+dfsg-1 [147 kB]
166s Get:14 http://ftpmaster.internal/ubuntu oracular/main amd64 gtk-update-icon-cache amd64 3.24.43-1ubuntu1 [51.9 kB]
166s Get:15 http://ftpmaster.internal/ubuntu oracular/main amd64 hicolor-icon-theme all 0.18-1 [13.5 kB]
166s Get:16 http://ftpmaster.internal/ubuntu oracular/main amd64 humanity-icon-theme all 0.6.16 [1282 kB]
166s Get:17 http://ftpmaster.internal/ubuntu oracular/main amd64 ubuntu-mono all 24.04-0ubuntu1 [151 kB]
166s Get:18 http://ftpmaster.internal/ubuntu oracular/main amd64 adwaita-icon-theme all 46.0-1 [723 kB]
166s Get:19 http://ftpmaster.internal/ubuntu oracular/main amd64 at-spi2-common all 2.52.0-1build1 [8674 B]
166s Get:20 http://ftpmaster.internal/ubuntu oracular/main amd64 libio-string-perl all 1.08-4 [11.1 kB]
166s Get:21 http://ftpmaster.internal/ubuntu oracular/universe amd64 libdata-stag-perl all 0.14-3 [372 kB]
166s Get:22 http://ftpmaster.internal/ubuntu oracular/universe amd64 libbio-perl-perl all 1.7.8-1 [2580 kB]
166s Get:23 http://ftpmaster.internal/ubuntu oracular/main amd64 libclass-data-inheritable-perl all 0.08-3 [8084 B]
166s Get:24 http://ftpmaster.internal/ubuntu oracular/main amd64 libdevel-stacktrace-perl all 2.0500-1 [22.1 kB]
166s Get:25 http://ftpmaster.internal/ubuntu oracular/main amd64 libexception-class-perl all 1.45-1 [28.6 kB]
166s Get:26 http://ftpmaster.internal/ubuntu oracular/universe amd64 libtest-deep-perl all 1.204-1 [47.1 kB]
166s Get:27 http://ftpmaster.internal/ubuntu oracular/main amd64 libcapture-tiny-perl all 0.48-2 [20.2 kB]
166s Get:28 http://ftpmaster.internal/ubuntu oracular/main amd64 libalgorithm-diff-perl all 1.201-1 [41.8 kB]
166s Get:29 http://ftpmaster.internal/ubuntu oracular/universe amd64 libtext-diff-perl all 1.45-2 [25.6 kB]
166s Get:30 http://ftpmaster.internal/ubuntu oracular/universe amd64 libtest-differences-perl all 0.71-1 [15.8 kB]
166s Get:31 http://ftpmaster.internal/ubuntu oracular/universe amd64 libsub-uplevel-perl all 0.2800-3 [11.6 kB]
166s Get:32 http://ftpmaster.internal/ubuntu oracular/universe amd64 libtest-exception-perl all 0.43-3 [13.4 kB]
166s Get:33 http://ftpmaster.internal/ubuntu oracular/universe amd64 libtest-warn-perl all 0.37-2 [12.6 kB]
166s Get:34 http://ftpmaster.internal/ubuntu oracular/universe amd64 libtest-most-perl all 0.38-1 [21.5 kB]
166s Get:35 http://ftpmaster.internal/ubuntu oracular/universe amd64 bioperl all 1.7.8-1 [216 kB]
166s Get:36 http://ftpmaster.internal/ubuntu oracular/main amd64 libisl23 amd64 0.26-3build1 [680 kB]
166s Get:37 http://ftpmaster.internal/ubuntu oracular/main amd64 libmpc3 amd64 1.3.1-1build1 [54.5 kB]
166s Get:38 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-1ubuntu1 [11.9 MB]
166s Get:39 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp-14 amd64 14.2.0-1ubuntu1 [1030 B]
166s Get:40 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B]
166s Get:41 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB]
166s Get:42 http://ftpmaster.internal/ubuntu oracular/main amd64 libcc1-0 amd64 14.2.0-1ubuntu1 [47.6 kB]
166s Get:43 http://ftpmaster.internal/ubuntu oracular/main amd64 libitm1 amd64 14.2.0-1ubuntu1 [29.3 kB]
166s Get:44 http://ftpmaster.internal/ubuntu oracular/main amd64 libasan8 amd64 14.2.0-1ubuntu1 [2997 kB]
166s Get:45 http://ftpmaster.internal/ubuntu oracular/main amd64 liblsan0 amd64 14.2.0-1ubuntu1 [1316 kB]
166s Get:46 http://ftpmaster.internal/ubuntu oracular/main amd64 libtsan2 amd64 14.2.0-1ubuntu1 [2733 kB]
166s Get:47 http://ftpmaster.internal/ubuntu oracular/main amd64 libubsan1 amd64 14.2.0-1ubuntu1 [1178 kB]
166s Get:48 http://ftpmaster.internal/ubuntu oracular/main amd64 libhwasan0 amd64 14.2.0-1ubuntu1 [1634 kB]
166s Get:49 http://ftpmaster.internal/ubuntu oracular/main amd64 libquadmath0 amd64 14.2.0-1ubuntu1 [153 kB]
166s Get:50 http://ftpmaster.internal/ubuntu oracular/main amd64 libgcc-14-dev amd64 14.2.0-1ubuntu1 [2813 kB]
167s Get:51 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-1ubuntu1 [23.4 MB]
167s Get:52 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc-14 amd64 14.2.0-1ubuntu1 [519 kB]
167s Get:53 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B]
167s Get:54 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B]
167s Get:55 http://ftpmaster.internal/ubuntu oracular/main amd64 libstdc++-14-dev amd64 14.2.0-1ubuntu1 [2476 kB]
167s Get:56 http://ftpmaster.internal/ubuntu oracular/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-1ubuntu1 [13.4 MB]
167s Get:57 http://ftpmaster.internal/ubuntu oracular/main amd64 g++-14 amd64 14.2.0-1ubuntu1 [18.2 kB]
167s Get:58 http://ftpmaster.internal/ubuntu oracular/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B]
167s Get:59 http://ftpmaster.internal/ubuntu oracular/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B]
167s Get:60 http://ftpmaster.internal/ubuntu oracular/main amd64 build-essential amd64 12.10ubuntu1 [4928 B]
167s Get:61 http://ftpmaster.internal/ubuntu oracular/main amd64 ca-certificates-java all 20240118 [11.6 kB]
167s Get:62 http://ftpmaster.internal/ubuntu oracular/main amd64 unzip amd64 6.0-28ubuntu5 [180 kB]
167s Get:63 http://ftpmaster.internal/ubuntu oracular/universe amd64 java-wrappers all 0.5 [9042 B]
167s Get:64 http://ftpmaster.internal/ubuntu oracular/universe amd64 libjaxp1.3-java all 1.3.05-6 [227 kB]
167s Get:65 http://ftpmaster.internal/ubuntu oracular/universe amd64 libxml-commons-external-java all 1.4.01-6 [240 kB]
167s Get:66 http://ftpmaster.internal/ubuntu oracular/universe amd64 libapache-pom-java all 29-2 [5284 B]
167s Get:67 http://ftpmaster.internal/ubuntu oracular/universe amd64 libcommons-parent-java all 56-1 [10.7 kB]
167s Get:68 http://ftpmaster.internal/ubuntu oracular/universe amd64 libcommons-io-java all 2.16.1-1 [451 kB]
167s Get:69 http://ftpmaster.internal/ubuntu oracular/universe amd64 libcommons-logging-java all 1.3.0-1ubuntu1 [63.8 kB]
167s Get:70 http://ftpmaster.internal/ubuntu oracular/universe amd64 libxmlgraphics-commons-java all 2.8-2 [619 kB]
167s Get:71 http://ftpmaster.internal/ubuntu oracular/universe amd64 libbatik-java all 1.17+dfsg-1 [3877 kB]
167s Get:72 http://ftpmaster.internal/ubuntu oracular/universe amd64 libcommons-lang-java all 2.6-10 [270 kB]
167s Get:73 http://ftpmaster.internal/ubuntu oracular/universe amd64 libjargs-java all 1.0.0-5 [13.9 kB]
167s Get:74 http://ftpmaster.internal/ubuntu oracular/universe amd64 libxml-commons-resolver1.1-java all 1.2-11 [97.6 kB]
167s Get:75 http://ftpmaster.internal/ubuntu oracular/universe amd64 libxerces2-java all 2.12.2-1 [1430 kB]
167s Get:76 http://ftpmaster.internal/ubuntu oracular/main amd64 java-common all 0.75+exp1 [6798 B]
167s Get:77 http://ftpmaster.internal/ubuntu oracular/main amd64 libpcsclite1 amd64 2.3.0-1 [23.9 kB]
167s Get:78 http://ftpmaster.internal/ubuntu oracular/main amd64 openjdk-21-jre-headless amd64 21.0.4+7-2 [46.6 MB]
167s Get:79 http://ftpmaster.internal/ubuntu oracular/main amd64 default-jre-headless amd64 2:1.21-75+exp1 [3094 B]
167s Get:80 http://ftpmaster.internal/ubuntu oracular/main amd64 libatk1.0-0t64 amd64 2.52.0-1build1 [55.3 kB]
167s Get:81 http://ftpmaster.internal/ubuntu oracular/main amd64 libxi6 amd64 2:1.8.1-1build1 [32.4 kB]
167s Get:82 http://ftpmaster.internal/ubuntu oracular/main amd64 libatspi2.0-0t64 amd64 2.52.0-1build1 [80.5 kB]
167s Get:83 http://ftpmaster.internal/ubuntu oracular/main amd64 libatk-bridge2.0-0t64 amd64 2.52.0-1build1 [66.0 kB]
167s Get:84 http://ftpmaster.internal/ubuntu oracular/main amd64 libpixman-1-0 amd64 0.42.2-1build1 [279 kB]
167s Get:85 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB]
167s Get:86 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B]
167s Get:87 http://ftpmaster.internal/ubuntu oracular/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB]
167s Get:88 http://ftpmaster.internal/ubuntu oracular/main amd64 libcairo2 amd64 1.18.0-3build1 [566 kB]
167s Get:89 http://ftpmaster.internal/ubuntu oracular/main amd64 libcairo-gobject2 amd64 1.18.0-3build1 [127 kB]
167s Get:90 http://ftpmaster.internal/ubuntu oracular/main amd64 libcolord2 amd64 1.4.7-1build2 [149 kB]
167s Get:91 http://ftpmaster.internal/ubuntu oracular/main amd64 libavahi-common-data amd64 0.8-13ubuntu6 [29.7 kB]
167s Get:92 http://ftpmaster.internal/ubuntu oracular/main amd64 libavahi-common3 amd64 0.8-13ubuntu6 [23.3 kB]
167s Get:93 http://ftpmaster.internal/ubuntu oracular/main amd64 libavahi-client3 amd64 0.8-13ubuntu6 [26.8 kB]
167s Get:94 http://ftpmaster.internal/ubuntu oracular/main amd64 libcups2t64 amd64 2.4.7-1.2ubuntu9 [267 kB]
167s Get:95 http://ftpmaster.internal/ubuntu oracular/main amd64 libepoxy0 amd64 1.5.10-1build1 [220 kB]
167s Get:96 http://ftpmaster.internal/ubuntu oracular/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB]
167s Get:97 http://ftpmaster.internal/ubuntu oracular/main amd64 libthai-data all 0.1.29-2build1 [158 kB]
167s Get:98 http://ftpmaster.internal/ubuntu oracular/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB]
167s Get:99 http://ftpmaster.internal/ubuntu oracular/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB]
167s Get:100 http://ftpmaster.internal/ubuntu oracular/main amd64 libpango-1.0-0 amd64 1.54.0+ds-1 [233 kB]
167s Get:101 http://ftpmaster.internal/ubuntu oracular/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-1 [42.3 kB]
167s Get:102 http://ftpmaster.internal/ubuntu oracular/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-1 [28.7 kB]
167s Get:103 http://ftpmaster.internal/ubuntu oracular/main amd64 libwayland-client0 amd64 1.23.0-1 [27.1 kB]
167s Get:104 http://ftpmaster.internal/ubuntu oracular/main amd64 libwayland-cursor0 amd64 1.23.0-1 [10.8 kB]
167s Get:105 http://ftpmaster.internal/ubuntu oracular/main amd64 libwayland-egl1 amd64 1.23.0-1 [5662 B]
167s Get:106 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcomposite1 amd64 1:0.4.5-1build3 [6320 B]
167s Get:107 http://ftpmaster.internal/ubuntu oracular/main amd64 libxfixes3 amd64 1:6.0.0-2build1 [10.8 kB]
167s Get:108 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcursor1 amd64 1:1.2.2-1 [20.9 kB]
167s Get:109 http://ftpmaster.internal/ubuntu oracular/main amd64 libxdamage1 amd64 1:1.1.6-1build1 [6150 B]
167s Get:110 http://ftpmaster.internal/ubuntu oracular/main amd64 libxinerama1 amd64 2:1.1.4-3build1 [6396 B]
167s Get:111 http://ftpmaster.internal/ubuntu oracular/main amd64 libxrandr2 amd64 2:1.5.4-1 [19.6 kB]
167s Get:112 http://ftpmaster.internal/ubuntu oracular/main amd64 libdconf1 amd64 0.40.0-4build2 [39.4 kB]
167s Get:113 http://ftpmaster.internal/ubuntu oracular/main amd64 dconf-service amd64 0.40.0-4build2 [27.5 kB]
167s Get:114 http://ftpmaster.internal/ubuntu oracular/main amd64 dconf-gsettings-backend amd64 0.40.0-4build2 [22.1 kB]
167s Get:115 http://ftpmaster.internal/ubuntu oracular/main amd64 libgtk-3-common all 3.24.43-1ubuntu1 [1201 kB]
167s Get:116 http://ftpmaster.internal/ubuntu oracular/main amd64 libgtk-3-0t64 amd64 3.24.43-1ubuntu1 [2899 kB]
167s Get:117 http://ftpmaster.internal/ubuntu oracular/main amd64 libglvnd0 amd64 1.7.0-1build1 [69.6 kB]
167s Get:118 http://ftpmaster.internal/ubuntu oracular/main amd64 libglapi-mesa amd64 24.0.9-0ubuntu2 [40.7 kB]
167s Get:119 http://ftpmaster.internal/ubuntu oracular/main amd64 libx11-xcb1 amd64 2:1.8.7-1build1 [7800 B]
167s Get:120 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-dri2-0 amd64 1.17.0-2 [7222 B]
167s Get:121 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-dri3-0 amd64 1.17.0-2 [7508 B]
167s Get:122 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-glx0 amd64 1.17.0-2 [24.8 kB]
167s Get:123 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-present0 amd64 1.17.0-2 [6064 B]
167s Get:124 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-randr0 amd64 1.17.0-2 [17.9 kB]
167s Get:125 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-sync1 amd64 1.17.0-2 [9312 B]
167s Get:126 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-xfixes0 amd64 1.17.0-2 [10.2 kB]
167s Get:127 http://ftpmaster.internal/ubuntu oracular/main amd64 libxshmfence1 amd64 1.3-1build5 [4764 B]
167s Get:128 http://ftpmaster.internal/ubuntu oracular/main amd64 libxxf86vm1 amd64 1:1.1.4-1build4 [9282 B]
167s Get:129 http://ftpmaster.internal/ubuntu oracular/main amd64 libvulkan1 amd64 1.3.283.0-1 [143 kB]
167s Get:130 http://ftpmaster.internal/ubuntu oracular/main amd64 libdrm-amdgpu1 amd64 2.4.122-1 [20.9 kB]
167s Get:131 http://ftpmaster.internal/ubuntu oracular/main amd64 libpciaccess0 amd64 0.17-3build1 [18.6 kB]
167s Get:132 http://ftpmaster.internal/ubuntu oracular/main amd64 libdrm-intel1 amd64 2.4.122-1 [64.6 kB]
167s Get:133 http://ftpmaster.internal/ubuntu oracular/main amd64 libdrm-nouveau2 amd64 2.4.122-1 [17.8 kB]
167s Get:134 http://ftpmaster.internal/ubuntu oracular/main amd64 libdrm-radeon1 amd64 2.4.122-1 [21.0 kB]
167s Get:135 http://ftpmaster.internal/ubuntu oracular/main amd64 libllvm17t64 amd64 1:17.0.6-15 [26.0 MB]
168s Get:136 http://ftpmaster.internal/ubuntu oracular/main amd64 libgl1-mesa-dri amd64 24.0.9-0ubuntu2 [8937 kB]
168s Get:137 http://ftpmaster.internal/ubuntu oracular/main amd64 libglx-mesa0 amd64 24.0.9-0ubuntu2 [151 kB]
168s Get:138 http://ftpmaster.internal/ubuntu oracular/main amd64 libglx0 amd64 1.7.0-1build1 [38.6 kB]
168s Get:139 http://ftpmaster.internal/ubuntu oracular/main amd64 libgl1 amd64 1.7.0-1build1 [102 kB]
168s Get:140 http://ftpmaster.internal/ubuntu oracular/main amd64 libasound2-data all 1.2.12-1 [21.0 kB]
168s Get:141 http://ftpmaster.internal/ubuntu oracular/main amd64 libasound2t64 amd64 1.2.12-1 [394 kB]
168s Get:142 http://ftpmaster.internal/ubuntu oracular/main amd64 libgif7 amd64 5.2.2-1ubuntu1 [35.2 kB]
168s Get:143 http://ftpmaster.internal/ubuntu oracular/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
168s Get:144 http://ftpmaster.internal/ubuntu oracular/main amd64 libxtst6 amd64 2:1.2.3-1.1build1 [12.6 kB]
168s Get:145 http://ftpmaster.internal/ubuntu oracular/main amd64 openjdk-21-jre amd64 21.0.4+7-2 [219 kB]
168s Get:146 http://ftpmaster.internal/ubuntu oracular/main amd64 default-jre amd64 2:1.21-75+exp1 [922 B]
168s Get:147 http://ftpmaster.internal/ubuntu oracular/universe amd64 cgview all 0.0.20100111-7 [2220 kB]
168s Get:148 http://ftpmaster.internal/ubuntu oracular/universe amd64 ncbi-data all 6.1.20170106+dfsg2-3 [3966 kB]
168s Get:149 http://ftpmaster.internal/ubuntu oracular/universe amd64 libmbedcrypto7t64 amd64 2.28.8-1 [209 kB]
168s Get:150 http://ftpmaster.internal/ubuntu oracular/universe amd64 libmbedx509-1t64 amd64 2.28.8-1 [46.6 kB]
168s Get:151 http://ftpmaster.internal/ubuntu oracular/universe amd64 libmbedtls14t64 amd64 2.28.8-1 [82.2 kB]
168s Get:152 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 ncbi-blast+ amd64 2.16.0+ds-6 [15.2 MB]
168s Get:153 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 ncbi-blast+-legacy all 2.16.0+ds-6 [4990 B]
168s Get:154 http://ftpmaster.internal/ubuntu oracular/universe amd64 imagemagick-6.q16 amd64 8:6.9.13.12+dfsg1-1 [254 kB]
168s Get:155 http://ftpmaster.internal/ubuntu oracular/universe amd64 imagemagick amd64 8:6.9.13.12+dfsg1-1 [14.2 kB]
168s Get:156 http://ftpmaster.internal/ubuntu oracular/main amd64 liberror-perl all 0.17029-2 [25.6 kB]
168s Get:157 http://ftpmaster.internal/ubuntu oracular/main amd64 libtie-ixhash-perl all 1.23-4 [11.3 kB]
168s Get:158 http://ftpmaster.internal/ubuntu oracular/main amd64 libencode-locale-perl all 1.05-3 [11.6 kB]
168s Get:159 http://ftpmaster.internal/ubuntu oracular/main amd64 libtimedate-perl all 2.3300-2 [34.0 kB]
168s Get:160 http://ftpmaster.internal/ubuntu oracular/main amd64 libhttp-date-perl all 6.06-1 [10.2 kB]
168s Get:161 http://ftpmaster.internal/ubuntu oracular/main amd64 libfile-listing-perl all 6.16-1 [11.3 kB]
168s Get:162 http://ftpmaster.internal/ubuntu oracular/main amd64 libhtml-tagset-perl all 3.24-1 [14.1 kB]
168s Get:163 http://ftpmaster.internal/ubuntu oracular/main amd64 liburi-perl all 5.28-1 [88.1 kB]
168s Get:164 http://ftpmaster.internal/ubuntu oracular/main amd64 libhtml-parser-perl amd64 3.83-1 [86.1 kB]
168s Get:165 http://ftpmaster.internal/ubuntu oracular/main amd64 libhtml-tree-perl all 5.07-3 [200 kB]
168s Get:166 http://ftpmaster.internal/ubuntu oracular/main amd64 libclone-perl amd64 0.46-1build3 [10.7 kB]
168s Get:167 http://ftpmaster.internal/ubuntu oracular/main amd64 libio-html-perl all 1.004-3 [15.9 kB]
168s Get:168 http://ftpmaster.internal/ubuntu oracular/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.1 kB]
168s Get:169 http://ftpmaster.internal/ubuntu oracular/main amd64 libhttp-message-perl all 6.46-1ubuntu1 [75.9 kB]
168s Get:170 http://ftpmaster.internal/ubuntu oracular/main amd64 libhttp-cookies-perl all 6.11-1 [18.2 kB]
168s Get:171 http://ftpmaster.internal/ubuntu oracular/main amd64 libhttp-negotiate-perl all 6.01-2 [12.4 kB]
168s Get:172 http://ftpmaster.internal/ubuntu oracular/main amd64 perl-openssl-defaults amd64 7build3 [6626 B]
168s Get:173 http://ftpmaster.internal/ubuntu oracular/main amd64 libnet-ssleay-perl amd64 1.94-1build4 [316 kB]
168s Get:174 http://ftpmaster.internal/ubuntu oracular/main amd64 libio-socket-ssl-perl all 2.088-1 [200 kB]
168s Get:175 http://ftpmaster.internal/ubuntu oracular/main amd64 libnet-http-perl all 6.23-1 [22.3 kB]
168s Get:176 http://ftpmaster.internal/ubuntu oracular/main amd64 liblwp-protocol-https-perl all 6.14-1 [9040 B]
168s Get:177 http://ftpmaster.internal/ubuntu oracular/main amd64 libtry-tiny-perl all 0.31-2 [20.8 kB]
168s Get:178 http://ftpmaster.internal/ubuntu oracular/main amd64 libwww-robotrules-perl all 6.02-1 [12.6 kB]
168s Get:179 http://ftpmaster.internal/ubuntu oracular/main amd64 libwww-perl all 6.77-1 [138 kB]
168s Get:180 http://ftpmaster.internal/ubuntu oracular/universe amd64 cct all 1:1.0.3-1 [36.3 MB]
168s Get:181 http://ftpmaster.internal/ubuntu oracular/universe amd64 cct-examples all 1:1.0.3-1 [43.6 MB]
169s Fetched 276 MB in 2s (111 MB/s)
169s Selecting previously unselected package libfftw3-double3:amd64.
169s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 74252 files and directories currently installed.)
169s Preparing to unpack .../000-libfftw3-double3_3.3.10-1ubuntu4_amd64.deb ...
169s Unpacking libfftw3-double3:amd64 (3.3.10-1ubuntu4) ...
169s Selecting previously unselected package liblcms2-2:amd64.
169s Preparing to unpack .../001-liblcms2-2_2.14-2build1_amd64.deb ...
169s Unpacking liblcms2-2:amd64 (2.14-2build1) ...
169s Selecting previously unselected package liblqr-1-0:amd64.
169s Preparing to unpack .../002-liblqr-1-0_0.4.2-2.1build2_amd64.deb ...
169s Unpacking liblqr-1-0:amd64 (0.4.2-2.1build2) ...
169s Selecting previously unselected package libltdl7:amd64.
169s Preparing to unpack .../003-libltdl7_2.4.7-7build1_amd64.deb ...
169s Unpacking libltdl7:amd64 (2.4.7-7build1) ...
169s Selecting previously unselected package libopenjp2-7:amd64.
169s Preparing to unpack .../004-libopenjp2-7_2.5.0-2build3_amd64.deb ...
169s Unpacking libopenjp2-7:amd64 (2.5.0-2build3) ...
169s Selecting previously unselected package libraw23t64:amd64.
170s Preparing to unpack .../005-libraw23t64_0.21.2-2.1build1_amd64.deb ...
170s Unpacking libraw23t64:amd64 (0.21.2-2.1build1) ...
170s Selecting previously unselected package libwebpdemux2:amd64.
170s Preparing to unpack .../006-libwebpdemux2_1.4.0-0.1_amd64.deb ...
170s Unpacking libwebpdemux2:amd64 (1.4.0-0.1) ...
170s Selecting previously unselected package libwebpmux3:amd64.
170s Preparing to unpack .../007-libwebpmux3_1.4.0-0.1_amd64.deb ...
170s Unpacking libwebpmux3:amd64 (1.4.0-0.1) ...
170s Selecting previously unselected package imagemagick-6-common.
170s Preparing to unpack .../008-imagemagick-6-common_8%3a6.9.13.12+dfsg1-1_all.deb ...
170s Unpacking imagemagick-6-common (8:6.9.13.12+dfsg1-1) ...
170s Selecting previously unselected package libmagickcore-6.q16-7t64:amd64.
170s Preparing to unpack .../009-libmagickcore-6.q16-7t64_8%3a6.9.13.12+dfsg1-1_amd64.deb ...
170s Unpacking libmagickcore-6.q16-7t64:amd64 (8:6.9.13.12+dfsg1-1) ...
170s Selecting previously unselected package libmagickwand-6.q16-7t64:amd64.
170s Preparing to unpack .../010-libmagickwand-6.q16-7t64_8%3a6.9.13.12+dfsg1-1_amd64.deb ...
170s Unpacking libmagickwand-6.q16-7t64:amd64 (8:6.9.13.12+dfsg1-1) ...
170s Selecting previously unselected package libgdk-pixbuf2.0-common.
170s Preparing to unpack .../011-libgdk-pixbuf2.0-common_2.42.12+dfsg-1_all.deb ...
170s Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ...
170s Selecting previously unselected package libgdk-pixbuf-2.0-0:amd64.
170s Preparing to unpack .../012-libgdk-pixbuf-2.0-0_2.42.12+dfsg-1_amd64.deb ...
170s Unpacking libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1) ...
170s Selecting previously unselected package gtk-update-icon-cache.
170s Preparing to unpack .../013-gtk-update-icon-cache_3.24.43-1ubuntu1_amd64.deb ...
170s Unpacking gtk-update-icon-cache (3.24.43-1ubuntu1) ...
170s Selecting previously unselected package hicolor-icon-theme.
170s Preparing to unpack .../014-hicolor-icon-theme_0.18-1_all.deb ...
170s Unpacking hicolor-icon-theme (0.18-1) ...
170s Selecting previously unselected package humanity-icon-theme.
170s Preparing to unpack .../015-humanity-icon-theme_0.6.16_all.deb ...
170s Unpacking humanity-icon-theme (0.6.16) ...
171s Selecting previously unselected package ubuntu-mono.
171s Preparing to unpack .../016-ubuntu-mono_24.04-0ubuntu1_all.deb ...
171s Unpacking ubuntu-mono (24.04-0ubuntu1) ...
171s Selecting previously unselected package adwaita-icon-theme.
171s Preparing to unpack .../017-adwaita-icon-theme_46.0-1_all.deb ...
171s Unpacking adwaita-icon-theme (46.0-1) ...
172s Selecting previously unselected package at-spi2-common.
172s Preparing to unpack .../018-at-spi2-common_2.52.0-1build1_all.deb ...
172s Unpacking at-spi2-common (2.52.0-1build1) ...
172s Selecting previously unselected package libio-string-perl.
172s Preparing to unpack .../019-libio-string-perl_1.08-4_all.deb ...
172s Unpacking libio-string-perl (1.08-4) ...
172s Selecting previously unselected package libdata-stag-perl.
172s Preparing to unpack .../020-libdata-stag-perl_0.14-3_all.deb ...
172s Unpacking libdata-stag-perl (0.14-3) ...
172s Selecting previously unselected package libbio-perl-perl.
172s Preparing to unpack .../021-libbio-perl-perl_1.7.8-1_all.deb ...
172s Unpacking libbio-perl-perl (1.7.8-1) ...
172s Selecting previously unselected package libclass-data-inheritable-perl.
172s Preparing to unpack .../022-libclass-data-inheritable-perl_0.08-3_all.deb ...
172s Unpacking libclass-data-inheritable-perl (0.08-3) ...
172s Selecting previously unselected package libdevel-stacktrace-perl.
172s Preparing to unpack .../023-libdevel-stacktrace-perl_2.0500-1_all.deb ...
172s Unpacking libdevel-stacktrace-perl (2.0500-1) ...
172s Selecting previously unselected package libexception-class-perl.
172s Preparing to unpack .../024-libexception-class-perl_1.45-1_all.deb ...
172s Unpacking libexception-class-perl (1.45-1) ...
172s Selecting previously unselected package libtest-deep-perl.
172s Preparing to unpack .../025-libtest-deep-perl_1.204-1_all.deb ...
172s Unpacking libtest-deep-perl (1.204-1) ...
172s Selecting previously unselected package libcapture-tiny-perl.
172s Preparing to unpack .../026-libcapture-tiny-perl_0.48-2_all.deb ...
172s Unpacking libcapture-tiny-perl (0.48-2) ...
172s Selecting previously unselected package libalgorithm-diff-perl.
172s Preparing to unpack .../027-libalgorithm-diff-perl_1.201-1_all.deb ...
172s Unpacking libalgorithm-diff-perl (1.201-1) ...
172s Selecting previously unselected package libtext-diff-perl.
172s Preparing to unpack .../028-libtext-diff-perl_1.45-2_all.deb ...
172s Unpacking libtext-diff-perl (1.45-2) ...
172s Selecting previously unselected package libtest-differences-perl.
172s Preparing to unpack .../029-libtest-differences-perl_0.71-1_all.deb ...
172s Unpacking libtest-differences-perl (0.71-1) ...
172s Selecting previously unselected package libsub-uplevel-perl.
172s Preparing to unpack .../030-libsub-uplevel-perl_0.2800-3_all.deb ...
172s Unpacking libsub-uplevel-perl (0.2800-3) ...
172s Selecting previously unselected package libtest-exception-perl.
172s Preparing to unpack .../031-libtest-exception-perl_0.43-3_all.deb ...
172s Unpacking libtest-exception-perl (0.43-3) ...
172s Selecting previously unselected package libtest-warn-perl.
172s Preparing to unpack .../032-libtest-warn-perl_0.37-2_all.deb ...
172s Unpacking libtest-warn-perl (0.37-2) ...
172s Selecting previously unselected package libtest-most-perl.
172s Preparing to unpack .../033-libtest-most-perl_0.38-1_all.deb ...
172s Unpacking libtest-most-perl (0.38-1) ...
172s Selecting previously unselected package bioperl.
172s Preparing to unpack .../034-bioperl_1.7.8-1_all.deb ...
172s Unpacking bioperl (1.7.8-1) ...
172s Selecting previously unselected package libisl23:amd64.
172s Preparing to unpack .../035-libisl23_0.26-3build1_amd64.deb ...
172s Unpacking libisl23:amd64 (0.26-3build1) ...
172s Selecting previously unselected package libmpc3:amd64.
172s Preparing to unpack .../036-libmpc3_1.3.1-1build1_amd64.deb ...
172s Unpacking libmpc3:amd64 (1.3.1-1build1) ...
172s Selecting previously unselected package cpp-14-x86-64-linux-gnu.
172s Preparing to unpack .../037-cpp-14-x86-64-linux-gnu_14.2.0-1ubuntu1_amd64.deb ...
172s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-1ubuntu1) ...
173s Selecting previously unselected package cpp-14.
173s Preparing to unpack .../038-cpp-14_14.2.0-1ubuntu1_amd64.deb ...
173s Unpacking cpp-14 (14.2.0-1ubuntu1) ...
173s Selecting previously unselected package cpp-x86-64-linux-gnu.
173s Preparing to unpack .../039-cpp-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ...
173s Unpacking cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
173s Selecting previously unselected package cpp.
173s Preparing to unpack .../040-cpp_4%3a14.1.0-2ubuntu1_amd64.deb ...
173s Unpacking cpp (4:14.1.0-2ubuntu1) ...
173s Selecting previously unselected package libcc1-0:amd64.
173s Preparing to unpack .../041-libcc1-0_14.2.0-1ubuntu1_amd64.deb ...
173s Unpacking libcc1-0:amd64 (14.2.0-1ubuntu1) ...
173s Selecting previously unselected package libitm1:amd64.
173s Preparing to unpack .../042-libitm1_14.2.0-1ubuntu1_amd64.deb ...
173s Unpacking libitm1:amd64 (14.2.0-1ubuntu1) ...
173s Selecting previously unselected package libasan8:amd64.
173s Preparing to unpack .../043-libasan8_14.2.0-1ubuntu1_amd64.deb ...
173s Unpacking libasan8:amd64 (14.2.0-1ubuntu1) ...
173s Selecting previously unselected package liblsan0:amd64.
173s Preparing to unpack .../044-liblsan0_14.2.0-1ubuntu1_amd64.deb ...
173s Unpacking liblsan0:amd64 (14.2.0-1ubuntu1) ...
173s Selecting previously unselected package libtsan2:amd64.
173s Preparing to unpack .../045-libtsan2_14.2.0-1ubuntu1_amd64.deb ...
173s Unpacking libtsan2:amd64 (14.2.0-1ubuntu1) ...
173s Selecting previously unselected package libubsan1:amd64.
173s Preparing to unpack .../046-libubsan1_14.2.0-1ubuntu1_amd64.deb ...
173s Unpacking libubsan1:amd64 (14.2.0-1ubuntu1) ...
173s Selecting previously unselected package libhwasan0:amd64.
173s Preparing to unpack .../047-libhwasan0_14.2.0-1ubuntu1_amd64.deb ...
173s Unpacking libhwasan0:amd64 (14.2.0-1ubuntu1) ...
173s Selecting previously unselected package libquadmath0:amd64.
173s Preparing to unpack .../048-libquadmath0_14.2.0-1ubuntu1_amd64.deb ...
173s Unpacking libquadmath0:amd64 (14.2.0-1ubuntu1) ...
173s Selecting previously unselected package libgcc-14-dev:amd64.
173s Preparing to unpack .../049-libgcc-14-dev_14.2.0-1ubuntu1_amd64.deb ...
173s Unpacking libgcc-14-dev:amd64 (14.2.0-1ubuntu1) ...
173s Selecting previously unselected package gcc-14-x86-64-linux-gnu.
173s Preparing to unpack .../050-gcc-14-x86-64-linux-gnu_14.2.0-1ubuntu1_amd64.deb ...
173s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-1ubuntu1) ...
174s Selecting previously unselected package gcc-14.
174s Preparing to unpack .../051-gcc-14_14.2.0-1ubuntu1_amd64.deb ...
174s Unpacking gcc-14 (14.2.0-1ubuntu1) ...
174s Selecting previously unselected package gcc-x86-64-linux-gnu.
174s Preparing to unpack .../052-gcc-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ...
174s Unpacking gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
174s Selecting previously unselected package gcc.
174s Preparing to unpack .../053-gcc_4%3a14.1.0-2ubuntu1_amd64.deb ...
174s Unpacking gcc (4:14.1.0-2ubuntu1) ...
174s Selecting previously unselected package libstdc++-14-dev:amd64.
174s Preparing to unpack .../054-libstdc++-14-dev_14.2.0-1ubuntu1_amd64.deb ...
174s Unpacking libstdc++-14-dev:amd64 (14.2.0-1ubuntu1) ...
174s Selecting previously unselected package g++-14-x86-64-linux-gnu.
174s Preparing to unpack .../055-g++-14-x86-64-linux-gnu_14.2.0-1ubuntu1_amd64.deb ...
174s Unpacking g++-14-x86-64-linux-gnu (14.2.0-1ubuntu1) ...
174s Selecting previously unselected package g++-14.
174s Preparing to unpack .../056-g++-14_14.2.0-1ubuntu1_amd64.deb ...
174s Unpacking g++-14 (14.2.0-1ubuntu1) ...
175s Selecting previously unselected package g++-x86-64-linux-gnu.
175s Preparing to unpack .../057-g++-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ...
175s Unpacking g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
175s Selecting previously unselected package g++.
175s Preparing to unpack .../058-g++_4%3a14.1.0-2ubuntu1_amd64.deb ...
175s Unpacking g++ (4:14.1.0-2ubuntu1) ...
175s Selecting previously unselected package build-essential.
175s Preparing to unpack .../059-build-essential_12.10ubuntu1_amd64.deb ...
175s Unpacking build-essential (12.10ubuntu1) ...
175s Selecting previously unselected package ca-certificates-java.
175s Preparing to unpack .../060-ca-certificates-java_20240118_all.deb ...
175s Unpacking ca-certificates-java (20240118) ...
175s Selecting previously unselected package unzip.
175s Preparing to unpack .../061-unzip_6.0-28ubuntu5_amd64.deb ...
175s Unpacking unzip (6.0-28ubuntu5) ...
175s Selecting previously unselected package java-wrappers.
175s Preparing to unpack .../062-java-wrappers_0.5_all.deb ...
175s Unpacking java-wrappers (0.5) ...
175s Selecting previously unselected package libjaxp1.3-java.
175s Preparing to unpack .../063-libjaxp1.3-java_1.3.05-6_all.deb ...
175s Unpacking libjaxp1.3-java (1.3.05-6) ...
175s Selecting previously unselected package libxml-commons-external-java.
175s Preparing to unpack .../064-libxml-commons-external-java_1.4.01-6_all.deb ...
175s Unpacking libxml-commons-external-java (1.4.01-6) ...
175s Selecting previously unselected package libapache-pom-java.
175s Preparing to unpack .../065-libapache-pom-java_29-2_all.deb ...
175s Unpacking libapache-pom-java (29-2) ...
175s Selecting previously unselected package libcommons-parent-java.
175s Preparing to unpack .../066-libcommons-parent-java_56-1_all.deb ...
175s Unpacking libcommons-parent-java (56-1) ...
175s Selecting previously unselected package libcommons-io-java.
175s Preparing to unpack .../067-libcommons-io-java_2.16.1-1_all.deb ...
175s Unpacking libcommons-io-java (2.16.1-1) ...
175s Selecting previously unselected package libcommons-logging-java.
175s Preparing to unpack .../068-libcommons-logging-java_1.3.0-1ubuntu1_all.deb ...
175s Unpacking libcommons-logging-java (1.3.0-1ubuntu1) ...
175s Selecting previously unselected package libxmlgraphics-commons-java.
175s Preparing to unpack .../069-libxmlgraphics-commons-java_2.8-2_all.deb ...
175s Unpacking libxmlgraphics-commons-java (2.8-2) ...
175s Selecting previously unselected package libbatik-java.
175s Preparing to unpack .../070-libbatik-java_1.17+dfsg-1_all.deb ...
175s Unpacking libbatik-java (1.17+dfsg-1) ...
175s Selecting previously unselected package libcommons-lang-java.
175s Preparing to unpack .../071-libcommons-lang-java_2.6-10_all.deb ...
175s Unpacking libcommons-lang-java (2.6-10) ...
175s Selecting previously unselected package libjargs-java.
175s Preparing to unpack .../072-libjargs-java_1.0.0-5_all.deb ...
175s Unpacking libjargs-java (1.0.0-5) ...
175s Selecting previously unselected package libxml-commons-resolver1.1-java.
175s Preparing to unpack .../073-libxml-commons-resolver1.1-java_1.2-11_all.deb ...
175s Unpacking libxml-commons-resolver1.1-java (1.2-11) ...
175s Selecting previously unselected package libxerces2-java.
175s Preparing to unpack .../074-libxerces2-java_2.12.2-1_all.deb ...
175s Unpacking libxerces2-java (2.12.2-1) ...
175s Selecting previously unselected package java-common.
175s Preparing to unpack .../075-java-common_0.75+exp1_all.deb ...
175s Unpacking java-common (0.75+exp1) ...
175s Selecting previously unselected package libpcsclite1:amd64.
175s Preparing to unpack .../076-libpcsclite1_2.3.0-1_amd64.deb ...
175s Unpacking libpcsclite1:amd64 (2.3.0-1) ...
175s Selecting previously unselected package openjdk-21-jre-headless:amd64.
175s Preparing to unpack .../077-openjdk-21-jre-headless_21.0.4+7-2_amd64.deb ...
175s Unpacking openjdk-21-jre-headless:amd64 (21.0.4+7-2) ...
176s Selecting previously unselected package default-jre-headless.
176s Preparing to unpack .../078-default-jre-headless_2%3a1.21-75+exp1_amd64.deb ...
176s Unpacking default-jre-headless (2:1.21-75+exp1) ...
176s Selecting previously unselected package libatk1.0-0t64:amd64.
176s Preparing to unpack .../079-libatk1.0-0t64_2.52.0-1build1_amd64.deb ...
176s Unpacking libatk1.0-0t64:amd64 (2.52.0-1build1) ...
176s Selecting previously unselected package libxi6:amd64.
176s Preparing to unpack .../080-libxi6_2%3a1.8.1-1build1_amd64.deb ...
176s Unpacking libxi6:amd64 (2:1.8.1-1build1) ...
176s Selecting previously unselected package libatspi2.0-0t64:amd64.
176s Preparing to unpack .../081-libatspi2.0-0t64_2.52.0-1build1_amd64.deb ...
176s Unpacking libatspi2.0-0t64:amd64 (2.52.0-1build1) ...
176s Selecting previously unselected package libatk-bridge2.0-0t64:amd64.
176s Preparing to unpack .../082-libatk-bridge2.0-0t64_2.52.0-1build1_amd64.deb ...
176s Unpacking libatk-bridge2.0-0t64:amd64 (2.52.0-1build1) ...
176s Selecting previously unselected package libpixman-1-0:amd64.
176s Preparing to unpack .../083-libpixman-1-0_0.42.2-1build1_amd64.deb ...
176s Unpacking libpixman-1-0:amd64 (0.42.2-1build1) ...
177s Selecting previously unselected package libxcb-render0:amd64.
177s Preparing to unpack .../084-libxcb-render0_1.17.0-2_amd64.deb ...
177s Unpacking libxcb-render0:amd64 (1.17.0-2) ...
177s Selecting previously unselected package libxcb-shm0:amd64.
177s Preparing to unpack .../085-libxcb-shm0_1.17.0-2_amd64.deb ...
177s Unpacking libxcb-shm0:amd64 (1.17.0-2) ...
177s Selecting previously unselected package libxrender1:amd64.
177s Preparing to unpack .../086-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ...
177s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ...
177s Selecting previously unselected package libcairo2:amd64.
177s Preparing to unpack .../087-libcairo2_1.18.0-3build1_amd64.deb ...
177s Unpacking libcairo2:amd64 (1.18.0-3build1) ...
177s Selecting previously unselected package libcairo-gobject2:amd64.
177s Preparing to unpack .../088-libcairo-gobject2_1.18.0-3build1_amd64.deb ...
177s Unpacking libcairo-gobject2:amd64 (1.18.0-3build1) ...
177s Selecting previously unselected package libcolord2:amd64.
177s Preparing to unpack .../089-libcolord2_1.4.7-1build2_amd64.deb ...
177s Unpacking libcolord2:amd64 (1.4.7-1build2) ...
177s Selecting previously unselected package libavahi-common-data:amd64.
177s Preparing to unpack .../090-libavahi-common-data_0.8-13ubuntu6_amd64.deb ...
177s Unpacking libavahi-common-data:amd64 (0.8-13ubuntu6) ...
177s Selecting previously unselected package libavahi-common3:amd64.
177s Preparing to unpack .../091-libavahi-common3_0.8-13ubuntu6_amd64.deb ...
177s Unpacking libavahi-common3:amd64 (0.8-13ubuntu6) ...
177s Selecting previously unselected package libavahi-client3:amd64.
177s Preparing to unpack .../092-libavahi-client3_0.8-13ubuntu6_amd64.deb ...
177s Unpacking libavahi-client3:amd64 (0.8-13ubuntu6) ...
177s Selecting previously unselected package libcups2t64:amd64.
177s Preparing to unpack .../093-libcups2t64_2.4.7-1.2ubuntu9_amd64.deb ...
177s Unpacking libcups2t64:amd64 (2.4.7-1.2ubuntu9) ...
177s Selecting previously unselected package libepoxy0:amd64.
177s Preparing to unpack .../094-libepoxy0_1.5.10-1build1_amd64.deb ...
177s Unpacking libepoxy0:amd64 (1.5.10-1build1) ...
177s Selecting previously unselected package fontconfig.
177s Preparing to unpack .../095-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ...
177s Unpacking fontconfig (2.15.0-1.1ubuntu2) ...
177s Selecting previously unselected package libthai-data.
177s Preparing to unpack .../096-libthai-data_0.1.29-2build1_all.deb ...
177s Unpacking libthai-data (0.1.29-2build1) ...
177s Selecting previously unselected package libdatrie1:amd64.
177s Preparing to unpack .../097-libdatrie1_0.2.13-3build1_amd64.deb ...
177s Unpacking libdatrie1:amd64 (0.2.13-3build1) ...
177s Selecting previously unselected package libthai0:amd64.
177s Preparing to unpack .../098-libthai0_0.1.29-2build1_amd64.deb ...
177s Unpacking libthai0:amd64 (0.1.29-2build1) ...
177s Selecting previously unselected package libpango-1.0-0:amd64.
177s Preparing to unpack .../099-libpango-1.0-0_1.54.0+ds-1_amd64.deb ...
177s Unpacking libpango-1.0-0:amd64 (1.54.0+ds-1) ...
177s Selecting previously unselected package libpangoft2-1.0-0:amd64.
177s Preparing to unpack .../100-libpangoft2-1.0-0_1.54.0+ds-1_amd64.deb ...
177s Unpacking libpangoft2-1.0-0:amd64 (1.54.0+ds-1) ...
177s Selecting previously unselected package libpangocairo-1.0-0:amd64.
177s Preparing to unpack .../101-libpangocairo-1.0-0_1.54.0+ds-1_amd64.deb ...
177s Unpacking libpangocairo-1.0-0:amd64 (1.54.0+ds-1) ...
177s Selecting previously unselected package libwayland-client0:amd64.
177s Preparing to unpack .../102-libwayland-client0_1.23.0-1_amd64.deb ...
177s Unpacking libwayland-client0:amd64 (1.23.0-1) ...
177s Selecting previously unselected package libwayland-cursor0:amd64.
177s Preparing to unpack .../103-libwayland-cursor0_1.23.0-1_amd64.deb ...
177s Unpacking libwayland-cursor0:amd64 (1.23.0-1) ...
177s Selecting previously unselected package libwayland-egl1:amd64.
177s Preparing to unpack .../104-libwayland-egl1_1.23.0-1_amd64.deb ...
177s Unpacking libwayland-egl1:amd64 (1.23.0-1) ...
177s Selecting previously unselected package libxcomposite1:amd64.
177s Preparing to unpack .../105-libxcomposite1_1%3a0.4.5-1build3_amd64.deb ...
177s Unpacking libxcomposite1:amd64 (1:0.4.5-1build3) ...
177s Selecting previously unselected package libxfixes3:amd64.
177s Preparing to unpack .../106-libxfixes3_1%3a6.0.0-2build1_amd64.deb ...
177s Unpacking libxfixes3:amd64 (1:6.0.0-2build1) ...
177s Selecting previously unselected package libxcursor1:amd64.
177s Preparing to unpack .../107-libxcursor1_1%3a1.2.2-1_amd64.deb ...
177s Unpacking libxcursor1:amd64 (1:1.2.2-1) ...
177s Selecting previously unselected package libxdamage1:amd64.
177s Preparing to unpack .../108-libxdamage1_1%3a1.1.6-1build1_amd64.deb ...
177s Unpacking libxdamage1:amd64 (1:1.1.6-1build1) ...
177s Selecting previously unselected package libxinerama1:amd64.
177s Preparing to unpack .../109-libxinerama1_2%3a1.1.4-3build1_amd64.deb ...
177s Unpacking libxinerama1:amd64 (2:1.1.4-3build1) ...
177s Selecting previously unselected package libxrandr2:amd64.
177s Preparing to unpack .../110-libxrandr2_2%3a1.5.4-1_amd64.deb ...
177s Unpacking libxrandr2:amd64 (2:1.5.4-1) ...
177s Selecting previously unselected package libdconf1:amd64.
177s Preparing to unpack .../111-libdconf1_0.40.0-4build2_amd64.deb ...
177s Unpacking libdconf1:amd64 (0.40.0-4build2) ...
177s Selecting previously unselected package dconf-service.
177s Preparing to unpack .../112-dconf-service_0.40.0-4build2_amd64.deb ...
177s Unpacking dconf-service (0.40.0-4build2) ...
177s Selecting previously unselected package dconf-gsettings-backend:amd64.
177s Preparing to unpack .../113-dconf-gsettings-backend_0.40.0-4build2_amd64.deb ...
177s Unpacking dconf-gsettings-backend:amd64 (0.40.0-4build2) ...
177s Selecting previously unselected package libgtk-3-common.
177s Preparing to unpack .../114-libgtk-3-common_3.24.43-1ubuntu1_all.deb ...
177s Unpacking libgtk-3-common (3.24.43-1ubuntu1) ...
177s Selecting previously unselected package libgtk-3-0t64:amd64.
177s Preparing to unpack .../115-libgtk-3-0t64_3.24.43-1ubuntu1_amd64.deb ...
177s Unpacking libgtk-3-0t64:amd64 (3.24.43-1ubuntu1) ...
178s Selecting previously unselected package libglvnd0:amd64.
178s Preparing to unpack .../116-libglvnd0_1.7.0-1build1_amd64.deb ...
178s Unpacking libglvnd0:amd64 (1.7.0-1build1) ...
178s Selecting previously unselected package libglapi-mesa:amd64.
178s Preparing to unpack .../117-libglapi-mesa_24.0.9-0ubuntu2_amd64.deb ...
178s Unpacking libglapi-mesa:amd64 (24.0.9-0ubuntu2) ...
178s Selecting previously unselected package libx11-xcb1:amd64.
178s Preparing to unpack .../118-libx11-xcb1_2%3a1.8.7-1build1_amd64.deb ...
178s Unpacking libx11-xcb1:amd64 (2:1.8.7-1build1) ...
178s Selecting previously unselected package libxcb-dri2-0:amd64.
178s Preparing to unpack .../119-libxcb-dri2-0_1.17.0-2_amd64.deb ...
178s Unpacking libxcb-dri2-0:amd64 (1.17.0-2) ...
178s Selecting previously unselected package libxcb-dri3-0:amd64.
178s Preparing to unpack .../120-libxcb-dri3-0_1.17.0-2_amd64.deb ...
178s Unpacking libxcb-dri3-0:amd64 (1.17.0-2) ...
178s Selecting previously unselected package libxcb-glx0:amd64.
178s Preparing to unpack .../121-libxcb-glx0_1.17.0-2_amd64.deb ...
178s Unpacking libxcb-glx0:amd64 (1.17.0-2) ...
178s Selecting previously unselected package libxcb-present0:amd64.
178s Preparing to unpack .../122-libxcb-present0_1.17.0-2_amd64.deb ...
178s Unpacking libxcb-present0:amd64 (1.17.0-2) ...
178s Selecting previously unselected package libxcb-randr0:amd64.
178s Preparing to unpack .../123-libxcb-randr0_1.17.0-2_amd64.deb ...
178s Unpacking libxcb-randr0:amd64 (1.17.0-2) ...
178s Selecting previously unselected package libxcb-sync1:amd64.
178s Preparing to unpack .../124-libxcb-sync1_1.17.0-2_amd64.deb ...
178s Unpacking libxcb-sync1:amd64 (1.17.0-2) ...
178s Selecting previously unselected package libxcb-xfixes0:amd64.
178s Preparing to unpack .../125-libxcb-xfixes0_1.17.0-2_amd64.deb ...
178s Unpacking libxcb-xfixes0:amd64 (1.17.0-2) ...
178s Selecting previously unselected package libxshmfence1:amd64.
178s Preparing to unpack .../126-libxshmfence1_1.3-1build5_amd64.deb ...
178s Unpacking libxshmfence1:amd64 (1.3-1build5) ...
178s Selecting previously unselected package libxxf86vm1:amd64.
178s Preparing to unpack .../127-libxxf86vm1_1%3a1.1.4-1build4_amd64.deb ...
178s Unpacking libxxf86vm1:amd64 (1:1.1.4-1build4) ...
178s Selecting previously unselected package libvulkan1:amd64.
178s Preparing to unpack .../128-libvulkan1_1.3.283.0-1_amd64.deb ...
178s Unpacking libvulkan1:amd64 (1.3.283.0-1) ...
178s Selecting previously unselected package libdrm-amdgpu1:amd64.
178s Preparing to unpack .../129-libdrm-amdgpu1_2.4.122-1_amd64.deb ...
178s Unpacking libdrm-amdgpu1:amd64 (2.4.122-1) ...
178s Selecting previously unselected package libpciaccess0:amd64.
178s Preparing to unpack .../130-libpciaccess0_0.17-3build1_amd64.deb ...
178s Unpacking libpciaccess0:amd64 (0.17-3build1) ...
178s Selecting previously unselected package libdrm-intel1:amd64.
178s Preparing to unpack .../131-libdrm-intel1_2.4.122-1_amd64.deb ...
178s Unpacking libdrm-intel1:amd64 (2.4.122-1) ...
178s Selecting previously unselected package libdrm-nouveau2:amd64.
178s Preparing to unpack .../132-libdrm-nouveau2_2.4.122-1_amd64.deb ...
178s Unpacking libdrm-nouveau2:amd64 (2.4.122-1) ...
178s Selecting previously unselected package libdrm-radeon1:amd64.
178s Preparing to unpack .../133-libdrm-radeon1_2.4.122-1_amd64.deb ...
178s Unpacking libdrm-radeon1:amd64 (2.4.122-1) ...
178s Selecting previously unselected package libllvm17t64:amd64.
178s Preparing to unpack .../134-libllvm17t64_1%3a17.0.6-15_amd64.deb ...
178s Unpacking libllvm17t64:amd64 (1:17.0.6-15) ...
179s Selecting previously unselected package libgl1-mesa-dri:amd64.
179s Preparing to unpack .../135-libgl1-mesa-dri_24.0.9-0ubuntu2_amd64.deb ...
179s Unpacking libgl1-mesa-dri:amd64 (24.0.9-0ubuntu2) ...
179s Selecting previously unselected package libglx-mesa0:amd64.
179s Preparing to unpack .../136-libglx-mesa0_24.0.9-0ubuntu2_amd64.deb ...
179s Unpacking libglx-mesa0:amd64 (24.0.9-0ubuntu2) ...
179s Selecting previously unselected package libglx0:amd64.
179s Preparing to unpack .../137-libglx0_1.7.0-1build1_amd64.deb ...
179s Unpacking libglx0:amd64 (1.7.0-1build1) ...
179s Selecting previously unselected package libgl1:amd64.
179s Preparing to unpack .../138-libgl1_1.7.0-1build1_amd64.deb ...
179s Unpacking libgl1:amd64 (1.7.0-1build1) ...
179s Selecting previously unselected package libasound2-data.
179s Preparing to unpack .../139-libasound2-data_1.2.12-1_all.deb ...
179s Unpacking libasound2-data (1.2.12-1) ...
179s Selecting previously unselected package libasound2t64:amd64.
179s Preparing to unpack .../140-libasound2t64_1.2.12-1_amd64.deb ...
179s Unpacking libasound2t64:amd64 (1.2.12-1) ...
179s Selecting previously unselected package libgif7:amd64.
179s Preparing to unpack .../141-libgif7_5.2.2-1ubuntu1_amd64.deb ...
179s Unpacking libgif7:amd64 (5.2.2-1ubuntu1) ...
179s Selecting previously unselected package x11-common.
179s Preparing to unpack .../142-x11-common_1%3a7.7+23ubuntu3_all.deb ...
179s Unpacking x11-common (1:7.7+23ubuntu3) ...
179s Selecting previously unselected package libxtst6:amd64.
179s Preparing to unpack .../143-libxtst6_2%3a1.2.3-1.1build1_amd64.deb ...
179s Unpacking libxtst6:amd64 (2:1.2.3-1.1build1) ...
179s Selecting previously unselected package openjdk-21-jre:amd64.
179s Preparing to unpack .../144-openjdk-21-jre_21.0.4+7-2_amd64.deb ...
179s Unpacking openjdk-21-jre:amd64 (21.0.4+7-2) ...
179s Selecting previously unselected package default-jre.
179s Preparing to unpack .../145-default-jre_2%3a1.21-75+exp1_amd64.deb ...
179s Unpacking default-jre (2:1.21-75+exp1) ...
179s Selecting previously unselected package cgview.
179s Preparing to unpack .../146-cgview_0.0.20100111-7_all.deb ...
179s Unpacking cgview (0.0.20100111-7) ...
179s Selecting previously unselected package ncbi-data.
179s Preparing to unpack .../147-ncbi-data_6.1.20170106+dfsg2-3_all.deb ...
179s Unpacking ncbi-data (6.1.20170106+dfsg2-3) ...
180s Selecting previously unselected package libmbedcrypto7t64:amd64.
180s Preparing to unpack .../148-libmbedcrypto7t64_2.28.8-1_amd64.deb ...
180s Unpacking libmbedcrypto7t64:amd64 (2.28.8-1) ...
180s Selecting previously unselected package libmbedx509-1t64:amd64.
180s Preparing to unpack .../149-libmbedx509-1t64_2.28.8-1_amd64.deb ...
180s Unpacking libmbedx509-1t64:amd64 (2.28.8-1) ...
180s Selecting previously unselected package libmbedtls14t64:amd64.
180s Preparing to unpack .../150-libmbedtls14t64_2.28.8-1_amd64.deb ...
180s Unpacking libmbedtls14t64:amd64 (2.28.8-1) ...
180s Selecting previously unselected package ncbi-blast+.
180s Preparing to unpack .../151-ncbi-blast+_2.16.0+ds-6_amd64.deb ...
180s Unpacking ncbi-blast+ (2.16.0+ds-6) ...
180s Selecting previously unselected package ncbi-blast+-legacy.
180s Preparing to unpack .../152-ncbi-blast+-legacy_2.16.0+ds-6_all.deb ...
180s Unpacking ncbi-blast+-legacy (2.16.0+ds-6) ...
180s Selecting previously unselected package imagemagick-6.q16.
180s Preparing to unpack .../153-imagemagick-6.q16_8%3a6.9.13.12+dfsg1-1_amd64.deb ...
180s Unpacking imagemagick-6.q16 (8:6.9.13.12+dfsg1-1) ...
180s Selecting previously unselected package imagemagick.
180s Preparing to unpack .../154-imagemagick_8%3a6.9.13.12+dfsg1-1_amd64.deb ...
180s Unpacking imagemagick (8:6.9.13.12+dfsg1-1) ...
180s Selecting previously unselected package liberror-perl.
180s Preparing to unpack .../155-liberror-perl_0.17029-2_all.deb ...
180s Unpacking liberror-perl (0.17029-2) ...
180s Selecting previously unselected package libtie-ixhash-perl.
180s Preparing to unpack .../156-libtie-ixhash-perl_1.23-4_all.deb ...
180s Unpacking libtie-ixhash-perl (1.23-4) ...
180s Selecting previously unselected package libencode-locale-perl.
180s Preparing to unpack .../157-libencode-locale-perl_1.05-3_all.deb ...
180s Unpacking libencode-locale-perl (1.05-3) ...
180s Selecting previously unselected package libtimedate-perl.
180s Preparing to unpack .../158-libtimedate-perl_2.3300-2_all.deb ...
180s Unpacking libtimedate-perl (2.3300-2) ...
180s Selecting previously unselected package libhttp-date-perl.
180s Preparing to unpack .../159-libhttp-date-perl_6.06-1_all.deb ...
180s Unpacking libhttp-date-perl (6.06-1) ...
180s Selecting previously unselected package libfile-listing-perl.
180s Preparing to unpack .../160-libfile-listing-perl_6.16-1_all.deb ...
180s Unpacking libfile-listing-perl (6.16-1) ...
180s Selecting previously unselected package libhtml-tagset-perl.
180s Preparing to unpack .../161-libhtml-tagset-perl_3.24-1_all.deb ...
180s Unpacking libhtml-tagset-perl (3.24-1) ...
180s Selecting previously unselected package liburi-perl.
180s Preparing to unpack .../162-liburi-perl_5.28-1_all.deb ...
180s Unpacking liburi-perl (5.28-1) ...
180s Selecting previously unselected package libhtml-parser-perl:amd64.
180s Preparing to unpack .../163-libhtml-parser-perl_3.83-1_amd64.deb ...
180s Unpacking libhtml-parser-perl:amd64 (3.83-1) ...
180s Selecting previously unselected package libhtml-tree-perl.
180s Preparing to unpack .../164-libhtml-tree-perl_5.07-3_all.deb ...
180s Unpacking libhtml-tree-perl (5.07-3) ...
180s Selecting previously unselected package libclone-perl:amd64.
180s Preparing to unpack .../165-libclone-perl_0.46-1build3_amd64.deb ...
180s Unpacking libclone-perl:amd64 (0.46-1build3) ...
180s Selecting previously unselected package libio-html-perl.
180s Preparing to unpack .../166-libio-html-perl_1.004-3_all.deb ...
180s Unpacking libio-html-perl (1.004-3) ...
180s Selecting previously unselected package liblwp-mediatypes-perl.
181s Preparing to unpack .../167-liblwp-mediatypes-perl_6.04-2_all.deb ...
181s Unpacking liblwp-mediatypes-perl (6.04-2) ...
181s Selecting previously unselected package libhttp-message-perl.
181s Preparing to unpack .../168-libhttp-message-perl_6.46-1ubuntu1_all.deb ...
181s Unpacking libhttp-message-perl (6.46-1ubuntu1) ...
181s Selecting previously unselected package libhttp-cookies-perl.
181s Preparing to unpack .../169-libhttp-cookies-perl_6.11-1_all.deb ...
181s Unpacking libhttp-cookies-perl (6.11-1) ...
181s Selecting previously unselected package libhttp-negotiate-perl.
181s Preparing to unpack .../170-libhttp-negotiate-perl_6.01-2_all.deb ...
181s Unpacking libhttp-negotiate-perl (6.01-2) ...
181s Selecting previously unselected package perl-openssl-defaults:amd64.
181s Preparing to unpack .../171-perl-openssl-defaults_7build3_amd64.deb ...
181s Unpacking perl-openssl-defaults:amd64 (7build3) ...
181s Selecting previously unselected package libnet-ssleay-perl:amd64.
181s Preparing to unpack .../172-libnet-ssleay-perl_1.94-1build4_amd64.deb ...
181s Unpacking libnet-ssleay-perl:amd64 (1.94-1build4) ...
181s Selecting previously unselected package libio-socket-ssl-perl.
181s Preparing to unpack .../173-libio-socket-ssl-perl_2.088-1_all.deb ...
181s Unpacking libio-socket-ssl-perl (2.088-1) ...
181s Selecting previously unselected package libnet-http-perl.
181s Preparing to unpack .../174-libnet-http-perl_6.23-1_all.deb ...
181s Unpacking libnet-http-perl (6.23-1) ...
181s Selecting previously unselected package liblwp-protocol-https-perl.
181s Preparing to unpack .../175-liblwp-protocol-https-perl_6.14-1_all.deb ...
181s Unpacking liblwp-protocol-https-perl (6.14-1) ...
181s Selecting previously unselected package libtry-tiny-perl.
181s Preparing to unpack .../176-libtry-tiny-perl_0.31-2_all.deb ...
181s Unpacking libtry-tiny-perl (0.31-2) ...
181s Selecting previously unselected package libwww-robotrules-perl.
181s Preparing to unpack .../177-libwww-robotrules-perl_6.02-1_all.deb ...
181s Unpacking libwww-robotrules-perl (6.02-1) ...
181s Selecting previously unselected package libwww-perl.
181s Preparing to unpack .../178-libwww-perl_6.77-1_all.deb ...
181s Unpacking libwww-perl (6.77-1) ...
181s Selecting previously unselected package cct.
181s Preparing to unpack .../179-cct_1%3a1.0.3-1_all.deb ...
181s Unpacking cct (1:1.0.3-1) ...
181s Selecting previously unselected package cct-examples.
181s Preparing to unpack .../180-cct-examples_1%3a1.0.3-1_all.deb ...
181s Unpacking cct-examples (1:1.0.3-1) ...
182s Setting up libxcb-dri3-0:amd64 (1.17.0-2) ...
182s Setting up liblcms2-2:amd64 (2.14-2build1) ...
182s Setting up ncbi-data (6.1.20170106+dfsg2-3) ...
182s Setting up libpixman-1-0:amd64 (0.42.2-1build1) ...
182s Setting up libx11-xcb1:amd64 (2:1.8.7-1build1) ...
182s Setting up libpciaccess0:amd64 (0.17-3build1) ...
182s Setting up fontconfig (2.15.0-1.1ubuntu2) ...
184s Regenerating fonts cache... done.
184s Setting up imagemagick-6-common (8:6.9.13.12+dfsg1-1) ...
184s Setting up libdrm-nouveau2:amd64 (2.4.122-1) ...
184s Setting up libtie-ixhash-perl (1.23-4) ...
184s Setting up libxdamage1:amd64 (1:1.1.6-1build1) ...
184s Setting up libxcb-xfixes0:amd64 (1.17.0-2) ...
184s Setting up hicolor-icon-theme (0.18-1) ...
184s Setting up libxi6:amd64 (2:1.8.1-1build1) ...
184s Setting up libmbedcrypto7t64:amd64 (2.28.8-1) ...
184s Setting up java-common (0.75+exp1) ...
184s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ...
184s Setting up libdatrie1:amd64 (0.2.13-3build1) ...
184s Setting up libtest-deep-perl (1.204-1) ...
184s Setting up libxcb-render0:amd64 (1.17.0-2) ...
184s Setting up libclone-perl:amd64 (0.46-1build3) ...
184s Setting up libalgorithm-diff-perl (1.201-1) ...
184s Setting up libdrm-radeon1:amd64 (2.4.122-1) ...
184s Setting up libglvnd0:amd64 (1.7.0-1build1) ...
184s Setting up libhtml-tagset-perl (3.24-1) ...
184s Setting up libxcb-glx0:amd64 (1.17.0-2) ...
184s Setting up libwebpdemux2:amd64 (1.4.0-0.1) ...
184s Setting up unzip (6.0-28ubuntu5) ...
184s Setting up libdrm-intel1:amd64 (2.4.122-1) ...
184s Setting up liblwp-mediatypes-perl (6.04-2) ...
184s Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ...
184s Setting up x11-common (1:7.7+23ubuntu3) ...
184s Setting up libtry-tiny-perl (0.31-2) ...
184s Setting up perl-openssl-defaults:amd64 (7build3) ...
184s Setting up libencode-locale-perl (1.05-3) ...
184s Setting up libxcb-shm0:amd64 (1.17.0-2) ...
184s Setting up libcairo2:amd64 (1.18.0-3build1) ...
184s Setting up libcolord2:amd64 (1.4.7-1build2) ...
184s Setting up libxxf86vm1:amd64 (1:1.1.4-1build4) ...
184s Setting up libxcb-present0:amd64 (1.17.0-2) ...
184s Setting up liberror-perl (0.17029-2) ...
184s Setting up libdconf1:amd64 (0.40.0-4build2) ...
184s Setting up libasound2-data (1.2.12-1) ...
184s Setting up libio-string-perl (1.08-4) ...
184s Setting up libclass-data-inheritable-perl (0.08-3) ...
184s Setting up libasound2t64:amd64 (1.2.12-1) ...
184s Setting up libllvm17t64:amd64 (1:17.0.6-15) ...
184s Setting up libepoxy0:amd64 (1.5.10-1build1) ...
184s Setting up libtext-diff-perl (1.45-2) ...
184s Setting up libxfixes3:amd64 (1:6.0.0-2build1) ...
184s Setting up libxcb-sync1:amd64 (1.17.0-2) ...
184s Setting up libapache-pom-java (29-2) ...
184s Setting up libavahi-common-data:amd64 (0.8-13ubuntu6) ...
184s Setting up libatspi2.0-0t64:amd64 (2.52.0-1build1) ...
184s Setting up libquadmath0:amd64 (14.2.0-1ubuntu1) ...
184s Setting up libxinerama1:amd64 (2:1.1.4-3build1) ...
184s Setting up libxml-commons-resolver1.1-java (1.2-11) ...
184s Setting up libmpc3:amd64 (1.3.1-1build1) ...
184s Setting up libio-html-perl (1.004-3) ...
184s Setting up libxrandr2:amd64 (2:1.5.4-1) ...
184s Setting up libpcsclite1:amd64 (2.3.0-1) ...
184s Setting up libltdl7:amd64 (2.4.7-7build1) ...
184s Setting up libfftw3-double3:amd64 (3.3.10-1ubuntu4) ...
184s Setting up libglapi-mesa:amd64 (24.0.9-0ubuntu2) ...
184s Setting up libraw23t64:amd64 (0.21.2-2.1build1) ...
184s Setting up libvulkan1:amd64 (1.3.283.0-1) ...
184s Setting up libcapture-tiny-perl (0.48-2) ...
184s Setting up libtimedate-perl (2.3300-2) ...
184s Setting up libubsan1:amd64 (14.2.0-1ubuntu1) ...
184s Setting up libxcb-dri2-0:amd64 (1.17.0-2) ...
184s Setting up libgif7:amd64 (5.2.2-1ubuntu1) ...
184s Setting up libdata-stag-perl (0.14-3) ...
184s Setting up liblqr-1-0:amd64 (0.4.2-2.1build2) ...
184s Setting up libxshmfence1:amd64 (1.3-1build5) ...
184s Setting up libhwasan0:amd64 (14.2.0-1ubuntu1) ...
184s Setting up at-spi2-common (2.52.0-1build1) ...
184s Setting up libxcb-randr0:amd64 (1.17.0-2) ...
184s Setting up libasan8:amd64 (14.2.0-1ubuntu1) ...
184s Setting up libxml-commons-external-java (1.4.01-6) ...
184s Setting up libjargs-java (1.0.0-5) ...
184s Setting up libsub-uplevel-perl (0.2800-3) ...
184s Setting up libopenjp2-7:amd64 (2.5.0-2build3) ...
184s Setting up libthai-data (0.1.29-2build1) ...
184s Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1) ...
184s Setting up libdevel-stacktrace-perl (2.0500-1) ...
184s Setting up libcairo-gobject2:amd64 (1.18.0-3build1) ...
184s Setting up libwayland-egl1:amd64 (1.23.0-1) ...
184s Setting up libbio-perl-perl (1.7.8-1) ...
184s Setting up libtsan2:amd64 (14.2.0-1ubuntu1) ...
184s Setting up ca-certificates-java (20240118) ...
185s No JRE found. Skipping Java certificates setup.
185s Setting up libxerces2-java (2.12.2-1) ...
185s Setting up libjaxp1.3-java (1.3.05-6) ...
185s Setting up libisl23:amd64 (0.26-3build1) ...
185s Setting up libwebpmux3:amd64 (1.4.0-0.1) ...
185s Setting up libxcomposite1:amd64 (1:0.4.5-1build3) ...
185s Setting up libcc1-0:amd64 (14.2.0-1ubuntu1) ...
185s Setting up liburi-perl (5.28-1) ...
185s Setting up liblsan0:amd64 (14.2.0-1ubuntu1) ...
185s Setting up libitm1:amd64 (14.2.0-1ubuntu1) ...
185s Setting up libdrm-amdgpu1:amd64 (2.4.122-1) ...
185s Setting up libwayland-client0:amd64 (1.23.0-1) ...
185s Setting up libnet-ssleay-perl:amd64 (1.94-1build4) ...
185s Setting up gtk-update-icon-cache (3.24.43-1ubuntu1) ...
185s Setting up libhttp-date-perl (6.06-1) ...
185s Setting up libmbedx509-1t64:amd64 (2.28.8-1) ...
185s Setting up java-wrappers (0.5) ...
185s Setting up libatk1.0-0t64:amd64 (2.52.0-1build1) ...
185s Setting up libfile-listing-perl (6.16-1) ...
185s Setting up openjdk-21-jre-headless:amd64 (21.0.4+7-2) ...
185s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode
185s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode
185s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
185s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
185s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
185s Setting up libxtst6:amd64 (2:1.2.3-1.1build1) ...
185s Setting up libtest-warn-perl (0.37-2) ...
185s Setting up libxcursor1:amd64 (1:1.2.2-1) ...
185s Setting up libgl1-mesa-dri:amd64 (24.0.9-0ubuntu2) ...
185s Setting up libcommons-parent-java (56-1) ...
185s Setting up libavahi-common3:amd64 (0.8-13ubuntu6) ...
185s Setting up libtest-differences-perl (0.71-1) ...
185s Setting up libcommons-logging-java (1.3.0-1ubuntu1) ...
185s Setting up libnet-http-perl (6.23-1) ...
185s Setting up libmagickcore-6.q16-7t64:amd64 (8:6.9.13.12+dfsg1-1) ...
185s Setting up dconf-service (0.40.0-4build2) ...
185s Setting up libexception-class-perl (1.45-1) ...
185s Setting up libcommons-lang-java (2.6-10) ...
185s Setting up libmagickwand-6.q16-7t64:amd64 (8:6.9.13.12+dfsg1-1) ...
185s Setting up libthai0:amd64 (0.1.29-2build1) ...
185s Setting up libtest-exception-perl (0.43-3) ...
185s Setting up cpp-14-x86-64-linux-gnu (14.2.0-1ubuntu1) ...
185s Setting up cpp-14 (14.2.0-1ubuntu1) ...
185s Setting up imagemagick-6.q16 (8:6.9.13.12+dfsg1-1) ...
185s update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode
185s update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode
185s update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode
185s update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode
185s update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode
185s update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode
185s update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode
185s update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode
185s update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode
185s update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode
185s update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode
185s update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode
185s update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode
185s update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode
185s update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode
185s update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode
185s update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode
185s update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode
185s update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode
185s update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode
185s update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode
185s update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode
185s Setting up libwww-robotrules-perl (6.02-1) ...
185s Setting up libmbedtls14t64:amd64 (2.28.8-1) ...
185s Setting up libwayland-cursor0:amd64 (1.23.0-1) ...
185s Setting up libhtml-parser-perl:amd64 (3.83-1) ...
185s Setting up libgcc-14-dev:amd64 (14.2.0-1ubuntu1) ...
185s Setting up libstdc++-14-dev:amd64 (14.2.0-1ubuntu1) ...
185s Setting up libavahi-client3:amd64 (0.8-13ubuntu6) ...
185s Setting up libio-socket-ssl-perl (2.088-1) ...
185s Setting up libhttp-message-perl (6.46-1ubuntu1) ...
185s Setting up cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
185s Setting up libatk-bridge2.0-0t64:amd64 (2.52.0-1build1) ...
185s Setting up libhttp-negotiate-perl (6.01-2) ...
185s Setting up libglx-mesa0:amd64 (24.0.9-0ubuntu2) ...
185s Setting up libglx0:amd64 (1.7.0-1build1) ...
185s Setting up dconf-gsettings-backend:amd64 (0.40.0-4build2) ...
185s Setting up libhttp-cookies-perl (6.11-1) ...
185s Setting up libtest-most-perl (0.38-1) ...
185s Setting up libcommons-io-java (2.16.1-1) ...
185s Setting up libhtml-tree-perl (5.07-3) ...
185s Setting up libpango-1.0-0:amd64 (1.54.0+ds-1) ...
185s Setting up libxmlgraphics-commons-java (2.8-2) ...
185s Setting up ncbi-blast+ (2.16.0+ds-6) ...
185s Setting up libgl1:amd64 (1.7.0-1build1) ...
185s Setting up imagemagick (8:6.9.13.12+dfsg1-1) ...
185s Setting up cpp (4:14.1.0-2ubuntu1) ...
185s Setting up gcc-14-x86-64-linux-gnu (14.2.0-1ubuntu1) ...
185s Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-1) ...
185s Setting up libcups2t64:amd64 (2.4.7-1.2ubuntu9) ...
185s Setting up libgtk-3-common (3.24.43-1ubuntu1) ...
185s Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-1) ...
185s Setting up bioperl (1.7.8-1) ...
185s Setting up ncbi-blast+-legacy (2.16.0+ds-6) ...
185s Setting up gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
185s Setting up libbatik-java (1.17+dfsg-1) ...
185s Setting up gcc-14 (14.2.0-1ubuntu1) ...
185s Setting up g++-14-x86-64-linux-gnu (14.2.0-1ubuntu1) ...
185s Setting up g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
185s Setting up g++-14 (14.2.0-1ubuntu1) ...
185s Setting up gcc (4:14.1.0-2ubuntu1) ...
185s Setting up g++ (4:14.1.0-2ubuntu1) ...
185s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
185s Setting up build-essential (12.10ubuntu1) ...
185s Setting up adwaita-icon-theme (46.0-1) ...
185s update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
185s Setting up liblwp-protocol-https-perl (6.14-1) ...
185s Setting up libwww-perl (6.77-1) ...
185s Setting up humanity-icon-theme (0.6.16) ...
185s Setting up ubuntu-mono (24.04-0ubuntu1) ...
185s Processing triggers for man-db (2.12.1-2) ...
187s Processing triggers for libglib2.0-0t64:amd64 (2.81.1-2ubuntu1) ...
187s Setting up libgtk-3-0t64:amd64 (3.24.43-1ubuntu1) ...
187s Processing triggers for libc-bin (2.39-0ubuntu9) ...
187s Processing triggers for ca-certificates-java (20240118) ...
187s Adding debian:ACCVRAIZ1.pem
187s Adding debian:AC_RAIZ_FNMT-RCM.pem
187s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem
187s Adding debian:ANF_Secure_Server_Root_CA.pem
187s Adding debian:Actalis_Authentication_Root_CA.pem
187s Adding debian:AffirmTrust_Commercial.pem
187s Adding debian:AffirmTrust_Networking.pem
187s Adding debian:AffirmTrust_Premium.pem
187s Adding debian:AffirmTrust_Premium_ECC.pem
187s Adding debian:Amazon_Root_CA_1.pem
187s Adding debian:Amazon_Root_CA_2.pem
187s Adding debian:Amazon_Root_CA_3.pem
187s Adding debian:Amazon_Root_CA_4.pem
187s Adding debian:Atos_TrustedRoot_2011.pem
187s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem
187s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem
187s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
187s Adding debian:BJCA_Global_Root_CA1.pem
187s Adding debian:BJCA_Global_Root_CA2.pem
187s Adding debian:Baltimore_CyberTrust_Root.pem
187s Adding debian:Buypass_Class_2_Root_CA.pem
187s Adding debian:Buypass_Class_3_Root_CA.pem
187s Adding debian:CA_Disig_Root_R2.pem
187s Adding debian:CFCA_EV_ROOT.pem
187s Adding debian:COMODO_Certification_Authority.pem
187s Adding debian:COMODO_ECC_Certification_Authority.pem
187s Adding debian:COMODO_RSA_Certification_Authority.pem
187s Adding debian:Certainly_Root_E1.pem
187s Adding debian:Certainly_Root_R1.pem
187s Adding debian:Certigna.pem
187s Adding debian:Certigna_Root_CA.pem
187s Adding debian:Certum_EC-384_CA.pem
187s Adding debian:Certum_Trusted_Network_CA.pem
187s Adding debian:Certum_Trusted_Network_CA_2.pem
187s Adding debian:Certum_Trusted_Root_CA.pem
187s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem
187s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem
187s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem
187s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem
187s Adding debian:Comodo_AAA_Services_root.pem
187s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem
187s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem
187s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
187s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
187s Adding debian:DigiCert_Assured_ID_Root_CA.pem
187s Adding debian:DigiCert_Assured_ID_Root_G2.pem
187s Adding debian:DigiCert_Assured_ID_Root_G3.pem
187s Adding debian:DigiCert_Global_Root_CA.pem
187s Adding debian:DigiCert_Global_Root_G2.pem
187s Adding debian:DigiCert_Global_Root_G3.pem
187s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
187s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem
187s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem
187s Adding debian:DigiCert_Trusted_Root_G4.pem
187s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
187s Adding debian:Entrust_Root_Certification_Authority.pem
187s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
187s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
187s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem
187s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem
187s Adding debian:GLOBALTRUST_2020.pem
187s Adding debian:GTS_Root_R1.pem
187s Adding debian:GTS_Root_R2.pem
187s Adding debian:GTS_Root_R3.pem
187s Adding debian:GTS_Root_R4.pem
187s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
187s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
187s Adding debian:GlobalSign_Root_CA.pem
187s Adding debian:GlobalSign_Root_CA_-_R3.pem
187s Adding debian:GlobalSign_Root_CA_-_R6.pem
187s Adding debian:GlobalSign_Root_E46.pem
187s Adding debian:GlobalSign_Root_R46.pem
187s Adding debian:Go_Daddy_Class_2_CA.pem
187s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
187s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem
187s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem
187s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
188s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
188s Adding debian:HiPKI_Root_CA_-_G1.pem
188s Adding debian:Hongkong_Post_Root_CA_3.pem
188s Adding debian:ISRG_Root_X1.pem
188s Adding debian:ISRG_Root_X2.pem
188s Adding debian:IdenTrust_Commercial_Root_CA_1.pem
188s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
188s Adding debian:Izenpe.com.pem
188s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
188s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem
188s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem
188s Adding debian:NAVER_Global_Root_Certification_Authority.pem
188s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
188s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
188s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem
188s Adding debian:QuoVadis_Root_CA_1_G3.pem
188s Adding debian:QuoVadis_Root_CA_2.pem
188s Adding debian:QuoVadis_Root_CA_2_G3.pem
188s Adding debian:QuoVadis_Root_CA_3.pem
188s Adding debian:QuoVadis_Root_CA_3_G3.pem
188s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem
188s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem
188s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem
188s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem
188s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem
188s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem
188s Adding debian:SZAFIR_ROOT_CA2.pem
188s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem
188s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem
188s Adding debian:SecureSign_RootCA11.pem
188s Adding debian:SecureTrust_CA.pem
188s Adding debian:Secure_Global_CA.pem
188s Adding debian:Security_Communication_ECC_RootCA1.pem
188s Adding debian:Security_Communication_RootCA2.pem
188s Adding debian:Security_Communication_RootCA3.pem
188s Adding debian:Security_Communication_Root_CA.pem
188s Adding debian:Starfield_Class_2_CA.pem
188s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
188s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
188s Adding debian:SwissSign_Gold_CA_-_G2.pem
188s Adding debian:SwissSign_Silver_CA_-_G2.pem
188s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
188s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
188s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem
188s Adding debian:TWCA_Global_Root_CA.pem
188s Adding debian:TWCA_Root_Certification_Authority.pem
188s Adding debian:TeliaSonera_Root_CA_v1.pem
188s Adding debian:Telia_Root_CA_v2.pem
188s Adding debian:TrustAsia_Global_Root_CA_G3.pem
188s Adding debian:TrustAsia_Global_Root_CA_G4.pem
188s Adding debian:Trustwave_Global_Certification_Authority.pem
188s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem
188s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem
188s Adding debian:TunTrust_Root_CA.pem
188s Adding debian:UCA_Extended_Validation_Root.pem
188s Adding debian:UCA_Global_G2_Root.pem
188s Adding debian:USERTrust_ECC_Certification_Authority.pem
188s Adding debian:USERTrust_RSA_Certification_Authority.pem
188s Adding debian:XRamp_Global_CA_Root.pem
188s Adding debian:certSIGN_ROOT_CA.pem
188s Adding debian:certSIGN_Root_CA_G2.pem
188s Adding debian:e-Szigno_Root_CA_2017.pem
188s Adding debian:ePKI_Root_Certification_Authority.pem
188s Adding debian:emSign_ECC_Root_CA_-_C3.pem
188s Adding debian:emSign_ECC_Root_CA_-_G3.pem
188s Adding debian:emSign_Root_CA_-_C1.pem
188s Adding debian:emSign_Root_CA_-_G1.pem
188s Adding debian:vTrus_ECC_Root_CA.pem
188s Adding debian:vTrus_Root_CA.pem
188s done.
188s Setting up openjdk-21-jre:amd64 (21.0.4+7-2) ...
188s Setting up default-jre-headless (2:1.21-75+exp1) ...
188s Setting up default-jre (2:1.21-75+exp1) ...
188s Setting up cgview (0.0.20100111-7) ...
188s Setting up cct (1:1.0.3-1) ...
188s Setting up cct-examples (1:1.0.3-1) ...
188s Reading package lists...
189s Building dependency tree...
189s Reading state information...
189s Starting pkgProblemResolver with broken count: 0
189s Starting 2 pkgProblemResolver with broken count: 0
189s Done
189s The following NEW packages will be installed:
189s   autopkgtest-satdep
190s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
190s Need to get 0 B/696 B of archives.
190s After this operation, 0 B of additional disk space will be used.
190s Get:1 /tmp/autopkgtest.u5MCoM/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [696 B]
190s Selecting previously unselected package autopkgtest-satdep.
190s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 92938 files and directories currently installed.)
190s Preparing to unpack .../2-autopkgtest-satdep.deb ...
190s Unpacking autopkgtest-satdep (0) ...
190s Setting up autopkgtest-satdep (0) ...
192s (Reading database ... 92938 files and directories currently installed.)
192s Removing autopkgtest-satdep (0) ...
192s autopkgtest [14:15:11]: test run-unit-test: [-----------------------
193s 'Check environment' test passed
193s Copying and extracting COG files
194s Preparing COG BLAST database
198s COG BLAST database created
198s Processing project 'test_blastn'
198s Processing project 'test_blastn' using configuration 'project_settings.conf'
198s [Wednesday August 07 14:15:17 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_blastn/project_settings.conf.
198s [Wednesday August 07 14:15:17 2024] [Notice] Splitting the reference genome sequence in /var/tmp/cct/test_output/test_blastn/reference_genome for BLAST searches.
198s [Wednesday August 07 14:15:17 2024] [Notice] Reference genome sequence has been split and written to /var/tmp/cct/test_output/test_blastn/reference_genome/split.
198s [Wednesday August 07 14:15:17 2024] [Notice] Splitting the comparison genome sequences in /var/tmp/cct/test_output/test_blastn/comparison_genomes for BLAST searches.
199s [Wednesday August 07 14:15:18 2024] [Notice] Comparison genome sequences have been split and written to /var/tmp/cct/test_output/test_blastn/comparison_genomes/split.
199s [Wednesday August 07 14:15:18 2024] [Notice] Creating BLAST databases using the files in /var/tmp/cct/test_output/test_blastn/comparison_genomes/split.
199s [Wednesday August 07 14:15:18 2024] [Notice] The BLAST databases have been created in /var/tmp/cct/test_output/test_blastn/blast/blast_db.
199s [Wednesday August 07 14:15:18 2024] [Notice] Performing BLAST comparisons between sequences in /var/tmp/cct/test_output/test_blastn/reference_genome/split and databases in /var/tmp/cct/test_output/test_blastn/blast/blast_db.
199s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000).
199s Warning: [blastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
199s Writing HSP to file.
199s Writing HSP to file.
199s Open /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_blastn to view the BLAST results.
200s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000).
200s Warning: [blastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
200s Writing HSP to file.
200s Writing HSP to file.
200s Open /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_blastn to view the BLAST results.
200s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000).
200s Warning: [blastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
200s Writing HSP to file.
200s Writing HSP to file.
200s Open /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_blastn to view the BLAST results.
200s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000).
200s Warning: [blastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
200s Writing HSP to file.
200s Writing HSP to file.
200s Open /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_blastn to view the BLAST results.
200s [Wednesday August 07 14:15:19 2024] [Notice] The BLAST results have been written to /var/tmp/cct/test_output/test_blastn/blast/blast_results_local.
200s [Wednesday August 07 14:15:19 2024] [Notice] Assigning COG categories to CDS translations from reference genome sequence in /var/tmp/cct/test_output/test_blastn/reference_genome.
200s [Wednesday August 07 14:15:19 2024] [Notice] COG categories have been written to /var/tmp/cct/test_output/test_blastn/features.
200s [Wednesday August 07 14:15:19 2024] [Notice] Creating CGView XML files.
200s [Wednesday August 07 14:15:19 2024] [Notice] The following BLAST results will be drawn, from outside to center:
200s [Wednesday August 07 14:15:19 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_blastn
200s [Wednesday August 07 14:15:19 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_blastn
200s [Wednesday August 07 14:15:19 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_blastn
200s [Wednesday August 07 14:15:19 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_blastn
201s Creating XML for feature sets on the outside of the backbone circle.
201s Feature sets written first are drawn closest to the backbone circle.
201s Creating XML for ORFs that are in reading frame +1.
201s Creating XML for ORFs that are in reading frame +2.
201s Creating XML for ORFs that are in reading frame +3.
201s Creating XML for feature sets on the inside of the backbone circle.
201s Feature sets written first are drawn closest to the backbone circle.
201s Creating XML for ORFs that are in reading frame -1.
201s Creating XML for ORFs that are in reading frame -2.
201s Creating XML for ORFs that are in reading frame -3.
201s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_blastn.
201s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_blastn.
201s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_blastn.
201s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_blastn.
201s Creating XML for GC content information.
201s Plotting GC content using a window size of 500 and a step of 1.
201s The maximum GC content value is 0.5768.
201s The minimum GC content value is 0.4311.
201s The average GC content value is 0.5051.
201s GC content will be scaled based on the maximum and minimum values.
201s GC content will be plotted as the deviation from the average value.
201s Creating XML for GC skew information.
201s Plotting GC skew using a window size of 500 and a step of 1.
201s The maximum GC skew value is 0.1587.
201s The minimum GC skew value is -0.2263.
201s The average GC skew value is -0.0036.
201s GC skew will be scaled based on the maximum and minimum values.
201s GC skew will be plotted as the deviation from the average value.
201s CGView XML file complete.
201s The recommended CGView command is:
201s ----------------------------------
201s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_blastn/maps/cgview_xml/test_blastn_project_settings.conf_medium.xml -o map.png
201s Success!
201s The following key-values were used:
201s -----------------------------------
201s arrowheadLength=6
201s average=T
201s atColorNeg=rgb(51,51,51)
201s atColorPos=rgb(51,51,51)
201s at_content=F
201s atSkewColorNeg=rgb(0,0,153)
201s atSkewColorPos=rgb(153,153,0)
201s at_skew=F
201s backboneColor=rgb(102,102,102)
201s backboneRadius=1000
201s backboneThickness=8
201s backgroundColor=white
201s blast_divider_ruler=F
201s blastRulerColor=rgb(255,165,0)
201s borderColor=black
201s combined_orfs=F
201s details=T
201s draw_divider_rings=T
201s featureOpacity=0.5
201s featureOpacityOther=0.5
201s featureSlotSpacing=6
201s featureThickness=24.27
201s featureThicknessPlot=145.64
201s feature_labels=F
201s gcColorNeg=rgb(0,0,0)
201s gcColorPos=rgb(0,0,0)
201s gc_content=T
201s gcSkewColorNeg=rgb(153,0,153)
201s gcSkewColorPos=rgb(0,153,0)
201s gc_skew=T
201s gene_decoration=arrow
201s gene_labels=F
201s global_label=true
201s height=3000
201s hit_labels=F
201s labelFontSize=15
201s labelPlacementQuality=good
201s labelLineLength=200
201s labelLineThickness=4
201s legend=T
201s legendFontSize=20
201s orf_labels=F
201s maxLabelLength=20
201s maxLegendLength=30
201s maxTitleLength=50
201s minimumFeatureLength=0.2
201s moveInnerLabelsToOuter=false
201s orfColor=rgb(204,0,0)
201s orfs=T
201s orf_size=25
201s otherColor=rgb(51,51,51)
201s parse_reading_frame=F
201s proteinColor=rgb(0,0,153)
201s reading_frames=F
201s rRNAColor=rgb(153,0,153)
201s rulerFontColor=rgb(0,0,0)
201s rulerFontSize=30
201s rulerPadding=40
201s scale=T
201s scale_blast=T
201s show_sequence_features=T
201s show_queries=F
201s startColor=rgb(153,0,153)
201s starts=ttg|ctg|att|atc|ata|atg|gtg
201s step=1
201s stopColor=rgb(204,0,0)
201s stops=taa|tag|tga
201s title=
201s titleFontSize=80
201s tickColor=rgb(0,51,0)
201s tickLength=15
201s tickThickness=6
201s tick_density=0.166666666666667
201s tRNAColor=rgb(153,0,0)
201s useInnerLabels=true
201s use_opacity=F
201s width=3000
201s window=500
201s -----------------------------------
201s [Wednesday August 07 14:15:20 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_blastn/maps/cgview_xml.
201s [Wednesday August 07 14:15:20 2024] [Notice] Creating CGView maps.
201s Parsing XML input.
203s Drawing features..........................
203s Positioning and drawing 0 labels..........................
203s 0 labels were removed.
203s Drawing tick marks.
204s Drawing legends.
204s The map has been drawn.
204s Writing picture to /var/tmp/cct/test_output/test_blastn/maps/test_blastn_project_settings.png
204s Writing HTML to /var/tmp/cct/test_output/test_blastn/maps/test_blastn_project_settings.html
204s [Wednesday August 07 14:15:23 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_blastn/maps.
204s Processing project 'test_plots'
204s Processing project 'test_plots' using configuration 'project_settings.conf'
204s [Wednesday August 07 14:15:23 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_plots/project_settings.conf.
204s [Wednesday August 07 14:15:23 2024] [Notice] Creating CGView XML files.
204s Creating XML for feature sets on the outside of the backbone circle.
204s Feature sets written first are drawn closest to the backbone circle.
204s Creating XML for ORFs that are in reading frame +1.
204s Creating XML for ORFs that are in reading frame +2.
204s Creating XML for ORFs that are in reading frame +3.
204s Creating XML for feature sets on the inside of the backbone circle.
204s Feature sets written first are drawn closest to the backbone circle.
204s Creating XML for ORFs that are in reading frame -1.
204s Creating XML for ORFs that are in reading frame -2.
204s Creating XML for ORFs that are in reading frame -3.
204s Creating XML for GC content information.
204s Plotting GC content using a window size of 50 and a step of 1.
204s The maximum GC content value is 1.0000.
204s The minimum GC content value is 0.0000.
204s The average GC content value is 0.6000.
204s GC content will be scaled based on the maximum and minimum values.
204s GC content will be plotted as the deviation from the average value.
204s Creating XML for GC skew information.
204s Plotting GC skew using a window size of 50 and a step of 1.
204s The maximum GC skew value is 1.0000.
204s The minimum GC skew value is -1.0000.
204s The average GC skew value is -0.3333.
204s GC skew will be scaled based on the maximum and minimum values.
204s GC skew will be plotted as the deviation from the average value.
204s CGView XML file complete.
204s The recommended CGView command is:
204s ----------------------------------
204s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_plots/maps/cgview_xml/test_plots_project_settings.conf_medium.xml -o map.png
204s Success!
204s The following key-values were used:
204s -----------------------------------
204s arrowheadLength=6
204s average=T
204s atColorNeg=rgb(51,51,51)
204s atColorPos=rgb(51,51,51)
204s at_content=F
204s atSkewColorNeg=rgb(0,0,153)
204s atSkewColorPos=rgb(153,153,0)
204s at_skew=F
204s backboneColor=rgb(102,102,102)
204s backboneRadius=1000
204s backboneThickness=8
204s backgroundColor=white
204s blast_divider_ruler=F
204s blastRulerColor=rgb(255,165,0)
204s borderColor=black
204s combined_orfs=F
204s details=T
204s draw_divider_rings=T
204s featureOpacity=0.5
204s featureOpacityOther=0.5
204s featureSlotSpacing=6
204s featureThickness=30
204s featureThicknessPlot=186.00
204s feature_labels=F
204s gcColorNeg=rgb(0,0,0)
204s gcColorPos=rgb(0,0,0)
204s gc_content=T
204s gcSkewColorNeg=rgb(153,0,153)
204s gcSkewColorPos=rgb(0,153,0)
204s gc_skew=T
204s gene_decoration=arrow
204s gene_labels=F
204s global_label=true
204s height=3000
204s hit_labels=F
204s labelFontSize=15
204s labelPlacementQuality=good
204s labelLineLength=200
204s labelLineThickness=4
204s legend=T
204s legendFontSize=20
204s orf_labels=F
204s maxLabelLength=20
204s maxLegendLength=30
204s maxTitleLength=50
204s minimumFeatureLength=0.2
204s moveInnerLabelsToOuter=false
204s orfColor=rgb(204,0,0)
204s orfs=T
204s orf_size=25
204s otherColor=rgb(51,51,51)
204s parse_reading_frame=F
204s proteinColor=rgb(0,0,153)
204s reading_frames=F
204s rRNAColor=rgb(153,0,153)
204s rulerFontColor=rgb(0,0,0)
204s rulerFontSize=30
204s rulerPadding=40
204s scale=T
204s scale_blast=T
204s show_sequence_features=T
204s show_queries=F
204s startColor=rgb(153,0,153)
204s starts=ttg|ctg|att|atc|ata|atg|gtg
204s step=1
204s stopColor=rgb(204,0,0)
204s stops=taa|tag|tga
204s title=
204s titleFontSize=80
204s tickColor=rgb(0,51,0)
204s tickLength=15
204s tickThickness=6
204s tick_density=0.166666666666667
204s tRNAColor=rgb(153,0,0)
204s useInnerLabels=true
204s use_opacity=F
204s width=3000
204s window=50
204s -----------------------------------
204s [Wednesday August 07 14:15:23 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_plots/maps/cgview_xml.
204s [Wednesday August 07 14:15:23 2024] [Notice] Creating CGView maps.
205s Parsing XML input.
206s Drawing features..................
206s Positioning and drawing 0 labels..........................
206s 0 labels were removed.
206s Drawing tick marks.
206s Drawing legends.
206s The map has been drawn.
206s Writing picture to /var/tmp/cct/test_output/test_plots/maps/test_plots_project_settings.png
206s Writing HTML to /var/tmp/cct/test_output/test_plots/maps/test_plots_project_settings.html
206s [Wednesday August 07 14:15:25 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_plots/maps.
206s Processing project 'test_blastp'
206s Processing project 'test_blastp' using configuration 'project_settings.conf'
206s [Wednesday August 07 14:15:25 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_blastp/project_settings.conf.
206s [Wednesday August 07 14:15:25 2024] [Notice] Extracting ORF translations from reference genome sequence in /var/tmp/cct/test_output/test_blastp/reference_genome for BLAST searches.
207s Extracting ORFs in reading frame 1 on strand 1.
207s Extracting ORFs in reading frame 2 on strand 1.
207s Extracting ORFs in reading frame 3 on strand 1.
207s Extracting ORFs in reading frame 1 on strand -1.
207s Extracting ORFs in reading frame 2 on strand -1.
207s Extracting ORFs in reading frame 3 on strand -1.
207s A total of 338 records were written to /var/tmp/cct/test_output/test_blastp/reference_genome/orfs/two_copies_of_long_ORF_opposite_directions.fasta_orfs.
207s [Wednesday August 07 14:15:26 2024] [Notice] Reference genome ORF translations have been written to /var/tmp/cct/test_output/test_blastp/reference_genome/orfs.
207s [Wednesday August 07 14:15:26 2024] [Notice] Copying protein sequences in /var/tmp/cct/test_output/test_blastp/comparison_genomes for BLAST searches.
207s [Wednesday August 07 14:15:26 2024] [Notice] Protein sequences have been copied to /var/tmp/cct/test_output/test_blastp/comparison_genomes/proteins.
207s [Wednesday August 07 14:15:26 2024] [Notice] Creating BLAST databases using the files in /var/tmp/cct/test_output/test_blastp/comparison_genomes/proteins.
207s [Wednesday August 07 14:15:26 2024] [Notice] The BLAST databases have been created in /var/tmp/cct/test_output/test_blastp/blast/blast_db.
207s [Wednesday August 07 14:15:26 2024] [Notice] Performing BLAST comparisons between sequences in /var/tmp/cct/test_output/test_blastp/reference_genome/orfs and databases in /var/tmp/cct/test_output/test_blastp/blast/blast_db.
207s [Wednesday August 07 14:15:26 2024] [Notice] The BLAST results have been written to /var/tmp/cct/test_output/test_blastp/blast/blast_results_local.
207s [Wednesday August 07 14:15:26 2024] [Notice] Assigning COG categories to CDS translations from reference genome sequence in /var/tmp/cct/test_output/test_blastp/reference_genome.
207s [Wednesday August 07 14:15:26 2024] [Notice] COG categories have been written to /var/tmp/cct/test_output/test_blastp/features.
207s [Wednesday August 07 14:15:26 2024] [Notice] Creating CGView XML files.
207s Creating XML for feature sets on the outside of the backbone circle.
207s Feature sets written first are drawn closest to the backbone circle.
207s Creating XML for ORFs that are in reading frame +1.
207s Creating XML for ORFs that are in reading frame +2.
207s Creating XML for ORFs that are in reading frame +3.
207s Creating XML for feature sets on the inside of the backbone circle.
207s Feature sets written first are drawn closest to the backbone circle.
207s Creating XML for ORFs that are in reading frame -1.
207s Creating XML for ORFs that are in reading frame -2.
207s Creating XML for ORFs that are in reading frame -3.
207s Creating XML for GC content information.
207s Plotting GC content using a window size of 500 and a step of 1.
207s The maximum GC content value is 0.5768.
207s The minimum GC content value is 0.4311.
207s The average GC content value is 0.5051.
207s GC content will be scaled based on the maximum and minimum values.
207s GC content will be plotted as the deviation from the average value.
207s Creating XML for GC skew information.
207s Plotting GC skew using a window size of 500 and a step of 1.
207s The maximum GC skew value is 0.1587.
207s The minimum GC skew value is -0.2263.
207s The average GC skew value is -0.0036.
207s GC skew will be scaled based on the maximum and minimum values.
207s GC skew will be plotted as the deviation from the average value.
207s CGView XML file complete.
207s The recommended CGView command is:
207s ----------------------------------
207s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_blastp/maps/cgview_xml/test_blastp_project_settings.conf_medium.xml -o map.png
207s Success!
207s The following key-values were used:
207s -----------------------------------
207s arrowheadLength=6
207s average=T
207s atColorNeg=rgb(51,51,51)
207s atColorPos=rgb(51,51,51)
207s at_content=F
207s atSkewColorNeg=rgb(0,0,153)
207s atSkewColorPos=rgb(153,153,0)
207s at_skew=F
207s backboneColor=rgb(102,102,102)
207s backboneRadius=1000
207s backboneThickness=8
207s backgroundColor=white
207s blast_divider_ruler=F
207s blastRulerColor=rgb(255,165,0)
207s borderColor=black
207s combined_orfs=F
207s details=T
207s draw_divider_rings=T
207s featureOpacity=0.5
207s featureOpacityOther=0.5
207s featureSlotSpacing=6
207s featureThickness=30
207s featureThicknessPlot=186.00
207s feature_labels=F
207s gcColorNeg=rgb(0,0,0)
207s gcColorPos=rgb(0,0,0)
207s gc_content=T
207s gcSkewColorNeg=rgb(153,0,153)
207s gcSkewColorPos=rgb(0,153,0)
207s gc_skew=T
207s gene_decoration=arrow
207s gene_labels=F
207s global_label=true
207s height=3000
207s hit_labels=F
207s labelFontSize=15
207s labelPlacementQuality=good
207s labelLineLength=200
207s labelLineThickness=4
207s legend=T
207s legendFontSize=20
207s orf_labels=F
207s maxLabelLength=20
207s maxLegendLength=30
207s maxTitleLength=50
207s minimumFeatureLength=0.2
207s moveInnerLabelsToOuter=false
207s orfColor=rgb(204,0,0)
207s orfs=T
207s orf_size=25
207s otherColor=rgb(51,51,51)
207s parse_reading_frame=F
207s proteinColor=rgb(0,0,153)
207s reading_frames=F
207s rRNAColor=rgb(153,0,153)
207s rulerFontColor=rgb(0,0,0)
207s rulerFontSize=30
207s rulerPadding=40
207s scale=T
207s scale_blast=T
207s show_sequence_features=T
207s show_queries=F
207s startColor=rgb(153,0,153)
207s starts=ttg|ctg|att|atc|ata|atg|gtg
207s step=1
207s stopColor=rgb(204,0,0)
207s stops=taa|tag|tga
207s title=
207s titleFontSize=80
207s tickColor=rgb(0,51,0)
207s tickLength=15
207s tickThickness=6
207s tick_density=0.166666666666667
207s tRNAColor=rgb(153,0,0)
207s useInnerLabels=true
207s use_opacity=F
207s width=3000
207s window=500
207s -----------------------------------
207s [Wednesday August 07 14:15:26 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_blastp/maps/cgview_xml.
207s [Wednesday August 07 14:15:26 2024] [Notice] Creating CGView maps.
207s Parsing XML input.
210s Drawing features..................
210s Positioning and drawing 0 labels..........................
210s 0 labels were removed.
210s Drawing tick marks.
210s Drawing legends.
210s The map has been drawn.
210s Writing picture to /var/tmp/cct/test_output/test_blastp/maps/test_blastp_project_settings.png
210s Writing HTML to /var/tmp/cct/test_output/test_blastp/maps/test_blastp_project_settings.html
210s [Wednesday August 07 14:15:29 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_blastp/maps.
210s Processing project 'test_tblastx'
210s Processing project 'test_tblastx' using configuration 'project_settings.conf'
210s [Wednesday August 07 14:15:29 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_tblastx/project_settings.conf.
210s [Wednesday August 07 14:15:29 2024] [Notice] Splitting the reference genome sequence in /var/tmp/cct/test_output/test_tblastx/reference_genome for BLAST searches.
210s [Wednesday August 07 14:15:29 2024] [Notice] Reference genome sequence has been split and written to /var/tmp/cct/test_output/test_tblastx/reference_genome/split.
210s [Wednesday August 07 14:15:29 2024] [Notice] Splitting the comparison genome sequences in /var/tmp/cct/test_output/test_tblastx/comparison_genomes for BLAST searches.
211s [Wednesday August 07 14:15:30 2024] [Notice] Comparison genome sequences have been split and written to /var/tmp/cct/test_output/test_tblastx/comparison_genomes/split.
211s [Wednesday August 07 14:15:30 2024] [Notice] Creating BLAST databases using the files in /var/tmp/cct/test_output/test_tblastx/comparison_genomes/split.
211s [Wednesday August 07 14:15:30 2024] [Notice] The BLAST databases have been created in /var/tmp/cct/test_output/test_tblastx/blast/blast_db.
211s [Wednesday August 07 14:15:30 2024] [Notice] Performing BLAST comparisons between sequences in /var/tmp/cct/test_output/test_tblastx/reference_genome/split and databases in /var/tmp/cct/test_output/test_tblastx/blast/blast_db.
211s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000).
211s Warning: [tblastx] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Open /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_tblastx to view the BLAST results.
212s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000).
212s Warning: [tblastx] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Open /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastx to view the BLAST results.
212s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000).
212s Warning: [tblastx] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Open /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_tblastx to view the BLAST results.
212s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000).
212s Warning: [tblastx] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Writing HSP to file.
212s Open /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastx to view the BLAST results.
212s [Wednesday August 07 14:15:31 2024] [Notice] The BLAST results have been written to /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local.
212s [Wednesday August 07 14:15:31 2024] [Notice] Assigning COG categories to CDS translations from reference genome sequence in /var/tmp/cct/test_output/test_tblastx/reference_genome.
212s [Wednesday August 07 14:15:31 2024] [Notice] COG categories have been written to /var/tmp/cct/test_output/test_tblastx/features.
212s [Wednesday August 07 14:15:31 2024] [Notice] Creating CGView XML files.
212s [Wednesday August 07 14:15:31 2024] [Notice] The following BLAST results will be drawn, from outside to center:
212s [Wednesday August 07 14:15:31 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_tblastx
212s [Wednesday August 07 14:15:31 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastx
212s [Wednesday August 07 14:15:31 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_tblastx
212s [Wednesday August 07 14:15:31 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastx
213s Creating XML for feature sets on the outside of the backbone circle.
213s Feature sets written first are drawn closest to the backbone circle.
213s Creating XML for ORFs that are in reading frame +1.
213s Creating XML for ORFs that are in reading frame +2.
213s Creating XML for ORFs that are in reading frame +3.
213s Creating XML for feature sets on the inside of the backbone circle.
213s Feature sets written first are drawn closest to the backbone circle.
213s Creating XML for ORFs that are in reading frame -1.
213s Creating XML for ORFs that are in reading frame -2.
213s Creating XML for ORFs that are in reading frame -3.
213s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_tblastx.
213s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastx.
213s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_tblastx.
213s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastx.
213s Creating XML for GC content information.
213s Plotting GC content using a window size of 500 and a step of 1.
213s The maximum GC content value is 0.5768.
213s The minimum GC content value is 0.4311.
213s The average GC content value is 0.5051.
213s GC content will be scaled based on the maximum and minimum values.
213s GC content will be plotted as the deviation from the average value.
213s Creating XML for GC skew information.
213s Plotting GC skew using a window size of 500 and a step of 1.
213s The maximum GC skew value is 0.1587.
213s The minimum GC skew value is -0.2263.
213s The average GC skew value is -0.0036.
213s GC skew will be scaled based on the maximum and minimum values.
213s GC skew will be plotted as the deviation from the average value.
213s CGView XML file complete.
213s The recommended CGView command is:
213s ----------------------------------
213s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_tblastx/maps/cgview_xml/test_tblastx_project_settings.conf_medium.xml -o map.png
213s Success!
213s The following key-values were used:
213s -----------------------------------
213s arrowheadLength=6
213s average=T
213s atColorNeg=rgb(51,51,51)
213s atColorPos=rgb(51,51,51)
213s at_content=F
213s atSkewColorNeg=rgb(0,0,153)
213s atSkewColorPos=rgb(153,153,0)
213s at_skew=F
213s backboneColor=rgb(102,102,102)
213s backboneRadius=1000
213s backboneThickness=8
213s backgroundColor=white
213s blast_divider_ruler=F
213s blastRulerColor=rgb(255,165,0)
213s borderColor=black
213s combined_orfs=F
213s details=T
213s draw_divider_rings=T
213s featureOpacity=0.5
213s featureOpacityOther=0.5
213s featureSlotSpacing=6
213s featureThickness=9.86
213s featureThicknessPlot=59.14
213s feature_labels=F
213s gcColorNeg=rgb(0,0,0)
213s gcColorPos=rgb(0,0,0)
213s gc_content=T
213s gcSkewColorNeg=rgb(153,0,153)
213s gcSkewColorPos=rgb(0,153,0)
213s gc_skew=T
213s gene_decoration=arrow
213s gene_labels=F
213s global_label=true
213s height=3000
213s hit_labels=F
213s labelFontSize=15
213s labelPlacementQuality=good
213s labelLineLength=200
213s labelLineThickness=4
213s legend=T
213s legendFontSize=20
213s orf_labels=F
213s maxLabelLength=20
213s maxLegendLength=30
213s maxTitleLength=50
213s minimumFeatureLength=0.2
213s moveInnerLabelsToOuter=false
213s orfColor=rgb(204,0,0)
213s orfs=T
213s orf_size=25
213s otherColor=rgb(51,51,51)
213s parse_reading_frame=T
213s proteinColor=rgb(0,0,153)
213s reading_frames=F
213s rRNAColor=rgb(153,0,153)
213s rulerFontColor=rgb(0,0,0)
213s rulerFontSize=30
213s rulerPadding=40
213s scale=T
213s scale_blast=T
213s show_sequence_features=T
213s show_queries=T
213s startColor=rgb(153,0,153)
213s starts=ttg|ctg|att|atc|ata|atg|gtg
213s step=1
213s stopColor=rgb(204,0,0)
213s stops=taa|tag|tga
213s title=
213s titleFontSize=80
213s tickColor=rgb(0,51,0)
213s tickLength=15
213s tickThickness=6
213s tick_density=0.166666666666667
213s tRNAColor=rgb(153,0,0)
213s useInnerLabels=true
213s use_opacity=F
213s width=3000
213s window=500
213s -----------------------------------
213s [Wednesday August 07 14:15:32 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_tblastx/maps/cgview_xml.
213s [Wednesday August 07 14:15:32 2024] [Notice] Creating CGView maps.
213s Parsing XML input.
215s Drawing features..................................................................
216s Positioning and drawing 0 labels..........................
216s 0 labels were removed.
216s Drawing tick marks.
216s Drawing legends.
216s The map has been drawn.
216s Writing picture to /var/tmp/cct/test_output/test_tblastx/maps/test_tblastx_project_settings.png
216s Writing HTML to /var/tmp/cct/test_output/test_tblastx/maps/test_tblastx_project_settings.html
216s [Wednesday August 07 14:15:35 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_tblastx/maps.
216s Processing project 'test_tblastn'
216s Processing project 'test_tblastn' using configuration 'project_settings.conf'
216s [Wednesday August 07 14:15:35 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_tblastn/project_settings.conf.
216s [Wednesday August 07 14:15:35 2024] [Notice] Extracting ORF translations from reference genome sequence in /var/tmp/cct/test_output/test_tblastn/reference_genome for BLAST searches.
216s Extracting ORFs in reading frame 1 on strand 1.
216s Extracting ORFs in reading frame 2 on strand 1.
216s Extracting ORFs in reading frame 3 on strand 1.
216s Extracting ORFs in reading frame 1 on strand -1.
216s Extracting ORFs in reading frame 2 on strand -1.
216s Extracting ORFs in reading frame 3 on strand -1.
216s A total of 338 records were written to /var/tmp/cct/test_output/test_tblastn/reference_genome/orfs/two_copies_of_long_ORF_opposite_directions.fasta_orfs.
216s [Wednesday August 07 14:15:35 2024] [Notice] Reference genome ORF translations have been written to /var/tmp/cct/test_output/test_tblastn/reference_genome/orfs.
216s [Wednesday August 07 14:15:35 2024] [Notice] Splitting the comparison genome sequences in /var/tmp/cct/test_output/test_tblastn/comparison_genomes for BLAST searches.
217s [Wednesday August 07 14:15:36 2024] [Notice] Comparison genome sequences have been split and written to /var/tmp/cct/test_output/test_tblastn/comparison_genomes/split.
217s [Wednesday August 07 14:15:36 2024] [Notice] Creating BLAST databases using the files in /var/tmp/cct/test_output/test_tblastn/comparison_genomes/split.
217s [Wednesday August 07 14:15:36 2024] [Notice] The BLAST databases have been created in /var/tmp/cct/test_output/test_tblastn/blast/blast_db.
217s [Wednesday August 07 14:15:36 2024] [Notice] Performing BLAST comparisons between sequences in /var/tmp/cct/test_output/test_tblastn/reference_genome/orfs and databases in /var/tmp/cct/test_output/test_tblastn/blast/blast_db.
217s Performing BLAST search for sequence number 1 (orf_1_start=52;end=216;strand=1;rf=1).
217s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
218s Performing BLAST search for sequence number 2 (orf_2_start=271;end=423;strand=1;rf=1).
218s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
218s Performing BLAST search for sequence number 3 (orf_3_start=538;end=3540;strand=1;rf=1).
218s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
218s Writing HSP to file.
218s Performing BLAST search for sequence number 4 (orf_4_start=3748;end=3843;strand=1;rf=1).
218s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
218s Performing BLAST search for sequence number 5 (orf_5_start=3883;end=4098;strand=1;rf=1).
218s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
218s Performing BLAST search for sequence number 6 (orf_6_start=4111;end=4218;strand=1;rf=1).
218s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
218s Performing BLAST search for sequence number 7 (orf_7_start=4258;end=4479;strand=1;rf=1).
218s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
218s Performing BLAST search for sequence number 8 (orf_8_start=4567;end=4854;strand=1;rf=1).
218s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
218s Performing BLAST search for sequence number 9 (orf_9_start=4939;end=5136;strand=1;rf=1).
218s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
218s Performing BLAST search for sequence number 10 (orf_10_start=5158;end=5373;strand=1;rf=1).
219s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
219s Performing BLAST search for sequence number 11 (orf_11_start=5431;end=5529;strand=1;rf=1).
219s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
219s Performing BLAST search for sequence number 12 (orf_12_start=5551;end=5703;strand=1;rf=1).
219s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
219s Performing BLAST search for sequence number 13 (orf_13_start=5770;end=5985;strand=1;rf=1).
219s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
219s Performing BLAST search for sequence number 14 (orf_14_start=6019;end=6093;strand=1;rf=1).
219s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
219s Writing HSP to file.
219s Performing BLAST search for sequence number 15 (orf_15_start=6094;end=6171;strand=1;rf=1).
219s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
219s Writing HSP to file.
219s Performing BLAST search for sequence number 16 (orf_16_start=6214;end=6336;strand=1;rf=1).
219s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
219s Writing HSP to file.
219s Performing BLAST search for sequence number 17 (orf_17_start=6730;end=6813;strand=1;rf=1).
219s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
219s Performing BLAST search for sequence number 18 (orf_18_start=6976;end=7062;strand=1;rf=1).
220s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
220s Performing BLAST search for sequence number 19 (orf_19_start=7303;end=7383;strand=1;rf=1).
220s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
220s Performing BLAST search for sequence number 20 (orf_20_start=7435;end=7554;strand=1;rf=1).
220s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
220s Writing HSP to file.
220s Performing BLAST search for sequence number 21 (orf_21_start=7564;end=7707;strand=1;rf=1).
220s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
220s Performing BLAST search for sequence number 22 (orf_22_start=7855;end=7965;strand=1;rf=1).
220s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
220s Performing BLAST search for sequence number 23 (orf_23_start=8044;end=8181;strand=1;rf=1).
220s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
220s Performing BLAST search for sequence number 24 (orf_24_start=8251;end=8427;strand=1;rf=1).
220s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
220s Performing BLAST search for sequence number 25 (orf_25_start=8527;end=8688;strand=1;rf=1).
220s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
220s Performing BLAST search for sequence number 26 (orf_26_start=9028;end=9144;strand=1;rf=1).
221s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
221s Performing BLAST search for sequence number 27 (orf_27_start=9181;end=9255;strand=1;rf=1).
221s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
221s Performing BLAST search for sequence number 28 (orf_28_start=9439;end=9621;strand=1;rf=1).
221s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
221s Performing BLAST search for sequence number 29 (orf_29_start=9700;end=9840;strand=1;rf=1).
221s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
221s Performing BLAST search for sequence number 30 (orf_30_start=10138;end=10494;strand=1;rf=1).
221s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
221s Performing BLAST search for sequence number 31 (orf_31_start=10495;end=10584;strand=1;rf=1).
221s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
221s Performing BLAST search for sequence number 32 (orf_32_start=10687;end=10767;strand=1;rf=1).
221s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
221s Performing BLAST search for sequence number 33 (orf_33_start=10819;end=10980;strand=1;rf=1).
221s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
221s Performing BLAST search for sequence number 34 (orf_34_start=11008;end=11085;strand=1;rf=1).
222s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
222s Performing BLAST search for sequence number 35 (orf_35_start=11164;end=11238;strand=1;rf=1).
222s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
222s Performing BLAST search for sequence number 36 (orf_36_start=11569;end=11742;strand=1;rf=1).
222s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
222s Performing BLAST search for sequence number 37 (orf_37_start=11743;end=11976;strand=1;rf=1).
222s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
222s Performing BLAST search for sequence number 38 (orf_38_start=12028;end=12132;strand=1;rf=1).
222s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
222s Performing BLAST search for sequence number 39 (orf_39_start=12226;end=12333;strand=1;rf=1).
222s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
222s Performing BLAST search for sequence number 40 (orf_40_start=12349;end=12537;strand=1;rf=1).
222s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
222s Performing BLAST search for sequence number 41 (orf_41_start=12544;end=12678;strand=1;rf=1).
223s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
223s Performing BLAST search for sequence number 42 (orf_42_start=12955;end=13035;strand=1;rf=1).
223s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
223s Performing BLAST search for sequence number 43 (orf_43_start=13198;end=13362;strand=1;rf=1).
223s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
223s Performing BLAST search for sequence number 44 (orf_44_start=13426;end=13536;strand=1;rf=1).
223s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
223s Performing BLAST search for sequence number 45 (orf_45_start=13558;end=13674;strand=1;rf=1).
223s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
223s Performing BLAST search for sequence number 46 (orf_46_start=13825;end=13962;strand=1;rf=1).
223s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
223s Performing BLAST search for sequence number 47 (orf_47_start=14029;end=14121;strand=1;rf=1).
223s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
223s Performing BLAST search for sequence number 48 (orf_48_start=14389;end=14586;strand=1;rf=1).
223s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
223s Performing BLAST search for sequence number 49 (orf_49_start=14764;end=14850;strand=1;rf=1).
224s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
224s Performing BLAST search for sequence number 50 (orf_50_start=14866;end=15039;strand=1;rf=1).
224s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
224s Performing BLAST search for sequence number 51 (orf_51_start=15256;end=15333;strand=1;rf=1).
224s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
224s Performing BLAST search for sequence number 52 (orf_52_start=15463;end=15561;strand=1;rf=1).
224s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
224s Performing BLAST search for sequence number 53 (orf_53_start=15688;end=15873;strand=1;rf=1).
224s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
224s Performing BLAST search for sequence number 54 (orf_54_start=15886;end=15966;strand=1;rf=1).
224s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
224s Performing BLAST search for sequence number 55 (orf_55_start=221;end=373;strand=1;rf=2).
224s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
224s Performing BLAST search for sequence number 56 (orf_56_start=377;end=541;strand=1;rf=2).
224s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
224s Performing BLAST search for sequence number 57 (orf_57_start=545;end=646;strand=1;rf=2).
225s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
225s Performing BLAST search for sequence number 58 (orf_58_start=647;end=754;strand=1;rf=2).
225s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
225s Writing HSP to file.
225s Performing BLAST search for sequence number 59 (orf_59_start=1406;end=1489;strand=1;rf=2).
225s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
225s Performing BLAST search for sequence number 60 (orf_60_start=1502;end=1582;strand=1;rf=2).
225s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
225s Performing BLAST search for sequence number 61 (orf_61_start=1658;end=1750;strand=1;rf=2).
225s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
225s Performing BLAST search for sequence number 62 (orf_62_start=1919;end=1999;strand=1;rf=2).
225s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
225s Performing BLAST search for sequence number 63 (orf_63_start=2003;end=2089;strand=1;rf=2).
225s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
225s Performing BLAST search for sequence number 64 (orf_64_start=2093;end=2179;strand=1;rf=2).
226s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
226s Performing BLAST search for sequence number 65 (orf_65_start=2195;end=2365;strand=1;rf=2).
226s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
226s Performing BLAST search for sequence number 66 (orf_66_start=2564;end=2662;strand=1;rf=2).
226s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
226s Performing BLAST search for sequence number 67 (orf_67_start=2687;end=2779;strand=1;rf=2).
226s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
226s Performing BLAST search for sequence number 68 (orf_68_start=2831;end=2986;strand=1;rf=2).
226s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
226s Performing BLAST search for sequence number 69 (orf_69_start=3290;end=3433;strand=1;rf=2).
226s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
226s Writing HSP to file.
226s Performing BLAST search for sequence number 70 (orf_70_start=3791;end=3895;strand=1;rf=2).
226s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
226s Performing BLAST search for sequence number 71 (orf_71_start=3899;end=4003;strand=1;rf=2).
226s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
226s Performing BLAST search for sequence number 72 (orf_72_start=4019;end=4153;strand=1;rf=2).
227s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
227s Performing BLAST search for sequence number 73 (orf_73_start=4355;end=4483;strand=1;rf=2).
227s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
227s Performing BLAST search for sequence number 74 (orf_74_start=4667;end=4786;strand=1;rf=2).
227s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
227s Performing BLAST search for sequence number 75 (orf_75_start=4838;end=5032;strand=1;rf=2).
227s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
227s Performing BLAST search for sequence number 76 (orf_76_start=5033;end=5149;strand=1;rf=2).
227s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
227s Performing BLAST search for sequence number 77 (orf_77_start=5630;end=5779;strand=1;rf=2).
227s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
227s Performing BLAST search for sequence number 78 (orf_78_start=5819;end=5959;strand=1;rf=2).
227s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
227s Performing BLAST search for sequence number 79 (orf_79_start=6356;end=6442;strand=1;rf=2).
227s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
227s Writing HSP to file.
227s Performing BLAST search for sequence number 80 (orf_80_start=6521;end=6916;strand=1;rf=2).
228s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
228s Performing BLAST search for sequence number 81 (orf_81_start=7049;end=7249;strand=1;rf=2).
228s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
228s Performing BLAST search for sequence number 82 (orf_82_start=7277;end=7357;strand=1;rf=2).
228s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
228s Performing BLAST search for sequence number 83 (orf_83_start=7385;end=7465;strand=1;rf=2).
228s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
228s Performing BLAST search for sequence number 84 (orf_84_start=7511;end=7594;strand=1;rf=2).
228s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
228s Performing BLAST search for sequence number 85 (orf_85_start=7616;end=7873;strand=1;rf=2).
228s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
228s Performing BLAST search for sequence number 86 (orf_86_start=7949;end=8047;strand=1;rf=2).
228s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
228s Performing BLAST search for sequence number 87 (orf_87_start=8063;end=8158;strand=1;rf=2).
228s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
228s Performing BLAST search for sequence number 88 (orf_88_start=8345;end=8419;strand=1;rf=2).
229s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
229s Performing BLAST search for sequence number 89 (orf_89_start=8432;end=8515;strand=1;rf=2).
229s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
229s Performing BLAST search for sequence number 90 (orf_90_start=8528;end=8638;strand=1;rf=2).
229s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
229s Performing BLAST search for sequence number 91 (orf_91_start=8639;end=8737;strand=1;rf=2).
229s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
229s Performing BLAST search for sequence number 92 (orf_92_start=8786;end=8887;strand=1;rf=2).
229s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
229s Performing BLAST search for sequence number 93 (orf_93_start=8948;end=9070;strand=1;rf=2).
229s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
229s Performing BLAST search for sequence number 94 (orf_94_start=9302;end=9424;strand=1;rf=2).
229s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
229s Performing BLAST search for sequence number 95 (orf_95_start=9470;end=9565;strand=1;rf=2).
229s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
229s Performing BLAST search for sequence number 96 (orf_96_start=9626;end=9775;strand=1;rf=2).
229s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
229s Performing BLAST search for sequence number 97 (orf_97_start=10262;end=10465;strand=1;rf=2).
230s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
230s Performing BLAST search for sequence number 98 (orf_98_start=10601;end=10762;strand=1;rf=2).
230s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
230s Performing BLAST search for sequence number 99 (orf_99_start=10769;end=10966;strand=1;rf=2).
230s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
230s Performing BLAST search for sequence number 100 (orf_100_start=11321;end=11398;strand=1;rf=2).
230s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
230s Performing BLAST search for sequence number 101 (orf_101_start=11576;end=11848;strand=1;rf=2).
230s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
230s Performing BLAST search for sequence number 102 (orf_102_start=11870;end=12028;strand=1;rf=2).
230s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
230s Writing HSP to file.
230s Performing BLAST search for sequence number 103 (orf_103_start=12173;end=12304;strand=1;rf=2).
230s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
230s Performing BLAST search for sequence number 104 (orf_104_start=12515;end=12595;strand=1;rf=2).
230s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
230s Performing BLAST search for sequence number 105 (orf_105_start=12818;end=12904;strand=1;rf=2).
231s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
231s Performing BLAST search for sequence number 106 (orf_106_start=13628;end=13864;strand=1;rf=2).
231s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
231s Performing BLAST search for sequence number 107 (orf_107_start=13919;end=14032;strand=1;rf=2).
231s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
231s Performing BLAST search for sequence number 108 (orf_108_start=14132;end=14380;strand=1;rf=2).
231s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
231s Performing BLAST search for sequence number 109 (orf_109_start=14555;end=14767;strand=1;rf=2).
231s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
231s Writing HSP to file.
231s Performing BLAST search for sequence number 110 (orf_110_start=14786;end=14998;strand=1;rf=2).
231s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
231s Performing BLAST search for sequence number 111 (orf_111_start=15110;end=15253;strand=1;rf=2).
231s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
231s Performing BLAST search for sequence number 112 (orf_112_start=15284;end=15457;strand=1;rf=2).
231s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
231s Performing BLAST search for sequence number 113 (orf_113_start=15473;end=15553;strand=1;rf=2).
232s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
232s Performing BLAST search for sequence number 114 (orf_114_start=15572;end=15676;strand=1;rf=2).
232s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
232s Performing BLAST search for sequence number 115 (orf_115_start=15731;end=15838;strand=1;rf=2).
232s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
232s Performing BLAST search for sequence number 116 (orf_116_start=15905;end=15991;strand=1;rf=2).
232s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
232s Performing BLAST search for sequence number 117 (orf_117_start=450;end=548;strand=1;rf=3).
232s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
232s Performing BLAST search for sequence number 118 (orf_118_start=771;end=893;strand=1;rf=3).
232s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
232s Performing BLAST search for sequence number 119 (orf_119_start=981;end=1142;strand=1;rf=3).
232s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
232s Performing BLAST search for sequence number 120 (orf_120_start=1359;end=1622;strand=1;rf=3).
232s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
232s Performing BLAST search for sequence number 121 (orf_121_start=1722;end=1817;strand=1;rf=3).
233s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
233s Performing BLAST search for sequence number 122 (orf_122_start=1926;end=2006;strand=1;rf=3).
233s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
233s Performing BLAST search for sequence number 123 (orf_123_start=2283;end=2369;strand=1;rf=3).
233s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
233s Performing BLAST search for sequence number 124 (orf_124_start=2466;end=2546;strand=1;rf=3).
233s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
233s Performing BLAST search for sequence number 125 (orf_125_start=2553;end=2666;strand=1;rf=3).
233s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
233s Performing BLAST search for sequence number 126 (orf_126_start=3054;end=3203;strand=1;rf=3).
233s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
233s Writing HSP to file.
233s Performing BLAST search for sequence number 127 (orf_127_start=3279;end=3428;strand=1;rf=3).
233s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
233s Writing HSP to file.
233s Performing BLAST search for sequence number 128 (orf_128_start=3537;end=3659;strand=1;rf=3).
233s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
233s Performing BLAST search for sequence number 129 (orf_129_start=3840;end=3923;strand=1;rf=3).
234s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
234s Performing BLAST search for sequence number 130 (orf_130_start=4485;end=4562;strand=1;rf=3).
234s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
234s Performing BLAST search for sequence number 131 (orf_131_start=4590;end=4727;strand=1;rf=3).
234s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
234s Performing BLAST search for sequence number 132 (orf_132_start=4851;end=4961;strand=1;rf=3).
234s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
234s Performing BLAST search for sequence number 133 (orf_133_start=5121;end=5501;strand=1;rf=3).
234s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
234s Performing BLAST search for sequence number 134 (orf_134_start=5538;end=5633;strand=1;rf=3).
234s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
234s Performing BLAST search for sequence number 135 (orf_135_start=5634;end=5888;strand=1;rf=3).
234s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
234s Performing BLAST search for sequence number 136 (orf_136_start=6072;end=6185;strand=1;rf=3).
234s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
234s Writing HSP to file.
234s Performing BLAST search for sequence number 137 (orf_137_start=6207;end=6347;strand=1;rf=3).
235s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
235s Writing HSP to file.
235s Performing BLAST search for sequence number 138 (orf_138_start=6450;end=6524;strand=1;rf=3).
235s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
235s Performing BLAST search for sequence number 139 (orf_139_start=6753;end=6848;strand=1;rf=3).
235s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
235s Performing BLAST search for sequence number 140 (orf_140_start=7128;end=7235;strand=1;rf=3).
235s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
235s Performing BLAST search for sequence number 141 (orf_141_start=7311;end=7394;strand=1;rf=3).
235s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
235s Performing BLAST search for sequence number 142 (orf_142_start=7473;end=7679;strand=1;rf=3).
235s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
235s Performing BLAST search for sequence number 143 (orf_143_start=7983;end=8066;strand=1;rf=3).
235s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
235s Performing BLAST search for sequence number 144 (orf_144_start=8388;end=8495;strand=1;rf=3).
235s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
235s Performing BLAST search for sequence number 145 (orf_145_start=8556;end=8789;strand=1;rf=3).
235s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
236s Performing BLAST search for sequence number 146 (orf_146_start=9093;end=9167;strand=1;rf=3).
236s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
236s Performing BLAST search for sequence number 147 (orf_147_start=9180;end=9305;strand=1;rf=3).
236s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
236s Performing BLAST search for sequence number 148 (orf_148_start=9366;end=9473;strand=1;rf=3).
236s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
236s Performing BLAST search for sequence number 149 (orf_149_start=9498;end=9662;strand=1;rf=3).
236s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
236s Performing BLAST search for sequence number 150 (orf_150_start=9663;end=9821;strand=1;rf=3).
236s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
236s Performing BLAST search for sequence number 151 (orf_151_start=9936;end=10025;strand=1;rf=3).
236s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
236s Performing BLAST search for sequence number 152 (orf_152_start=10284;end=10385;strand=1;rf=3).
236s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
236s Performing BLAST search for sequence number 153 (orf_153_start=10416;end=10574;strand=1;rf=3).
236s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
236s Performing BLAST search for sequence number 154 (orf_154_start=10581;end=10697;strand=1;rf=3).
237s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
237s Performing BLAST search for sequence number 155 (orf_155_start=10962;end=11159;strand=1;rf=3).
237s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
237s Performing BLAST search for sequence number 156 (orf_156_start=11286;end=11450;strand=1;rf=3).
237s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
237s Performing BLAST search for sequence number 157 (orf_157_start=11550;end=11681;strand=1;rf=3).
237s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
237s Performing BLAST search for sequence number 158 (orf_158_start=11709;end=11891;strand=1;rf=3).
237s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
237s Performing BLAST search for sequence number 159 (orf_159_start=12123;end=12203;strand=1;rf=3).
237s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
237s Performing BLAST search for sequence number 160 (orf_160_start=12288;end=12365;strand=1;rf=3).
237s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
237s Performing BLAST search for sequence number 161 (orf_161_start=12465;end=12554;strand=1;rf=3).
237s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
237s Performing BLAST search for sequence number 162 (orf_162_start=12558;end=12866;strand=1;rf=3).
237s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
237s Performing BLAST search for sequence number 163 (orf_163_start=12885;end=12959;strand=1;rf=3).
238s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
238s Performing BLAST search for sequence number 164 (orf_164_start=13104;end=13247;strand=1;rf=3).
238s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
238s Performing BLAST search for sequence number 165 (orf_165_start=13254;end=13370;strand=1;rf=3).
238s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
238s Performing BLAST search for sequence number 166 (orf_166_start=13887;end=13997;strand=1;rf=3).
238s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
238s Performing BLAST search for sequence number 167 (orf_167_start=14103;end=14198;strand=1;rf=3).
238s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
238s Performing BLAST search for sequence number 168 (orf_168_start=14226;end=14336;strand=1;rf=3).
238s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
238s Performing BLAST search for sequence number 169 (orf_169_start=14631;end=14717;strand=1;rf=3).
238s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
238s Performing BLAST search for sequence number 170 (orf_170_start=14895;end=15074;strand=1;rf=3).
238s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
238s Performing BLAST search for sequence number 171 (orf_171_start=15129;end=15215;strand=1;rf=3).
239s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
239s Performing BLAST search for sequence number 172 (orf_172_start=15429;end=15506;strand=1;rf=3).
239s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
239s Performing BLAST search for sequence number 173 (orf_173_start=15600;end=15695;strand=1;rf=3).
239s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
239s Performing BLAST search for sequence number 174 (orf_174_start=15590;end=15679;strand=-1;rf=1).
239s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
239s Performing BLAST search for sequence number 175 (orf_175_start=15356;end=15448;strand=-1;rf=1).
239s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
239s Performing BLAST search for sequence number 176 (orf_176_start=14987;end=15082;strand=-1;rf=1).
239s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
239s Performing BLAST search for sequence number 177 (orf_177_start=14399;end=14575;strand=-1;rf=1).
239s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
239s Performing BLAST search for sequence number 178 (orf_178_start=14195;end=14329;strand=-1;rf=1).
239s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
239s Performing BLAST search for sequence number 179 (orf_179_start=14027;end=14104;strand=-1;rf=1).
240s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
240s Performing BLAST search for sequence number 180 (orf_180_start=13835;end=14017;strand=-1;rf=1).
240s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
240s Performing BLAST search for sequence number 181 (orf_181_start=13736;end=13822;strand=-1;rf=1).
240s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
240s Performing BLAST search for sequence number 182 (orf_182_start=13475;end=13666;strand=-1;rf=1).
240s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
240s Writing HSP to file.
240s Performing BLAST search for sequence number 183 (orf_183_start=13244;end=13375;strand=-1;rf=1).
240s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
240s Performing BLAST search for sequence number 184 (orf_184_start=13100;end=13198;strand=-1;rf=1).
240s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
240s Writing HSP to file.
240s Performing BLAST search for sequence number 185 (orf_185_start=12686;end=12982;strand=-1;rf=1).
240s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
240s Performing BLAST search for sequence number 186 (orf_186_start=12473;end=12550;strand=-1;rf=1).
240s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
240s Performing BLAST search for sequence number 187 (orf_187_start=12305;end=12382;strand=-1;rf=1).
241s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
241s Performing BLAST search for sequence number 188 (orf_188_start=11951;end=12025;strand=-1;rf=1).
241s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
241s Performing BLAST search for sequence number 189 (orf_189_start=11636;end=11755;strand=-1;rf=1).
241s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
241s Performing BLAST search for sequence number 190 (orf_190_start=11525;end=11632;strand=-1;rf=1).
241s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
241s Performing BLAST search for sequence number 191 (orf_191_start=11156;end=11350;strand=-1;rf=1).
241s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
241s Performing BLAST search for sequence number 192 (orf_192_start=10841;end=11092;strand=-1;rf=1).
241s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
241s Performing BLAST search for sequence number 193 (orf_193_start=10694;end=10822;strand=-1;rf=1).
241s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
241s Performing BLAST search for sequence number 194 (orf_194_start=10604;end=10681;strand=-1;rf=1).
241s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
241s Performing BLAST search for sequence number 195 (orf_195_start=10439;end=10597;strand=-1;rf=1).
242s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
242s Performing BLAST search for sequence number 196 (orf_196_start=9461;end=9550;strand=-1;rf=1).
242s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
242s Performing BLAST search for sequence number 197 (orf_197_start=9278;end=9439;strand=-1;rf=1).
242s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
242s Performing BLAST search for sequence number 198 (orf_198_start=9164;end=9262;strand=-1;rf=1).
242s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
242s Performing BLAST search for sequence number 199 (orf_199_start=8708;end=8830;strand=-1;rf=1).
242s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
242s Performing BLAST search for sequence number 200 (orf_200_start=8459;end=8620;strand=-1;rf=1).
242s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
242s Performing BLAST search for sequence number 201 (orf_201_start=7979;end=8242;strand=-1;rf=1).
242s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
242s Performing BLAST search for sequence number 202 (orf_202_start=7784;end=7879;strand=-1;rf=1).
242s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
242s Performing BLAST search for sequence number 203 (orf_203_start=7595;end=7675;strand=-1;rf=1).
243s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
243s Performing BLAST search for sequence number 204 (orf_204_start=7232;end=7318;strand=-1;rf=1).
243s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
243s Performing BLAST search for sequence number 205 (orf_205_start=7055;end=7135;strand=-1;rf=1).
243s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
243s Performing BLAST search for sequence number 206 (orf_206_start=6935;end=7048;strand=-1;rf=1).
243s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
243s Performing BLAST search for sequence number 207 (orf_207_start=6398;end=6547;strand=-1;rf=1).
243s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
243s Writing HSP to file.
243s Performing BLAST search for sequence number 208 (orf_208_start=6173;end=6322;strand=-1;rf=1).
243s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
243s Writing HSP to file.
243s Performing BLAST search for sequence number 209 (orf_209_start=5867;end=5947;strand=-1;rf=1).
243s Performing BLAST search for sequence number 210 (orf_210_start=5555;end=5758;strand=-1;rf=1).
243s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
244s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
244s Performing BLAST search for sequence number 211 (orf_211_start=5195;end=5539;strand=-1;rf=1).
244s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
244s Performing BLAST search for sequence number 212 (orf_212_start=5018;end=5188;strand=-1;rf=1).
244s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
244s Performing BLAST search for sequence number 213 (orf_213_start=4835;end=5005;strand=-1;rf=1).
244s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
244s Performing BLAST search for sequence number 214 (orf_214_start=4139;end=4228;strand=-1;rf=1).
244s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
244s Performing BLAST search for sequence number 215 (orf_215_start=3416;end=3529;strand=-1;rf=1).
244s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
244s Writing HSP to file.
244s Performing BLAST search for sequence number 216 (orf_216_start=3254;end=3394;strand=-1;rf=1).
244s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
244s Writing HSP to file.
244s Performing BLAST search for sequence number 217 (orf_217_start=3077;end=3151;strand=-1;rf=1).
244s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
244s Performing BLAST search for sequence number 218 (orf_218_start=2753;end=2848;strand=-1;rf=1).
244s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
244s Performing BLAST search for sequence number 219 (orf_219_start=2366;end=2473;strand=-1;rf=1).
245s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
245s Performing BLAST search for sequence number 220 (orf_220_start=2207;end=2290;strand=-1;rf=1).
245s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
245s Performing BLAST search for sequence number 221 (orf_221_start=1922;end=2128;strand=-1;rf=1).
245s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
245s Performing BLAST search for sequence number 222 (orf_222_start=1535;end=1618;strand=-1;rf=1).
245s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
245s Performing BLAST search for sequence number 223 (orf_223_start=1106;end=1213;strand=-1;rf=1).
245s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
245s Performing BLAST search for sequence number 224 (orf_224_start=812;end=1045;strand=-1;rf=1).
245s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
245s Performing BLAST search for sequence number 225 (orf_225_start=15673;end=15855;strand=-1;rf=2).
245s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
245s Performing BLAST search for sequence number 226 (orf_226_start=15445;end=15549;strand=-1;rf=2).
245s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
245s Writing HSP to file.
245s Performing BLAST search for sequence number 227 (orf_227_start=15250;end=15381;strand=-1;rf=2).
246s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
246s Performing BLAST search for sequence number 228 (orf_228_start=14842;end=15213;strand=-1;rf=2).
246s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
246s Performing BLAST search for sequence number 229 (orf_229_start=14536;end=14799;strand=-1;rf=2).
246s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
246s Performing BLAST search for sequence number 230 (orf_230_start=14254;end=14364;strand=-1;rf=2).
246s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
246s Performing BLAST search for sequence number 231 (orf_231_start=13921;end=14112;strand=-1;rf=2).
246s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
246s Performing BLAST search for sequence number 232 (orf_232_start=13618;end=13869;strand=-1;rf=2).
246s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
246s Performing BLAST search for sequence number 233 (orf_233_start=13459;end=13545;strand=-1;rf=2).
246s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
246s Performing BLAST search for sequence number 234 (orf_234_start=13255;end=13455;strand=-1;rf=2).
246s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
246s Performing BLAST search for sequence number 235 (orf_235_start=13165;end=13242;strand=-1;rf=2).
247s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
247s Performing BLAST search for sequence number 236 (orf_236_start=12442;end=12588;strand=-1;rf=2).
247s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
247s Performing BLAST search for sequence number 237 (orf_237_start=12133;end=12378;strand=-1;rf=2).
247s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
247s Performing BLAST search for sequence number 238 (orf_238_start=12025;end=12105;strand=-1;rf=2).
247s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
247s Performing BLAST search for sequence number 239 (orf_239_start=11629;end=11958;strand=-1;rf=2).
247s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
247s Performing BLAST search for sequence number 240 (orf_240_start=11434;end=11595;strand=-1;rf=2).
247s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
247s Performing BLAST search for sequence number 241 (orf_241_start=11170;end=11244;strand=-1;rf=2).
247s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
247s Performing BLAST search for sequence number 242 (orf_242_start=11053;end=11136;strand=-1;rf=2).
247s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
247s Performing BLAST search for sequence number 243 (orf_243_start=10759;end=10881;strand=-1;rf=2).
247s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
247s Performing BLAST search for sequence number 244 (orf_244_start=10618;end=10740;strand=-1;rf=2).
248s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
248s Performing BLAST search for sequence number 245 (orf_245_start=10243;end=10356;strand=-1;rf=2).
248s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
248s Performing BLAST search for sequence number 246 (orf_246_start=9961;end=10050;strand=-1;rf=2).
248s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
248s Performing BLAST search for sequence number 247 (orf_247_start=9655;end=9732;strand=-1;rf=2).
248s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
248s Performing BLAST search for sequence number 248 (orf_248_start=9490;end=9642;strand=-1;rf=2).
248s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
248s Performing BLAST search for sequence number 249 (orf_249_start=9340;end=9489;strand=-1;rf=2).
248s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
248s Performing BLAST search for sequence number 250 (orf_250_start=6061;end=9060;strand=-1;rf=2).
248s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
248s Writing HSP to file.
248s Performing BLAST search for sequence number 251 (orf_251_start=5962;end=6039;strand=-1;rf=2).
248s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
248s Performing BLAST search for sequence number 252 (orf_252_start=5704;end=5925;strand=-1;rf=2).
248s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
248s Performing BLAST search for sequence number 253 (orf_253_start=4951;end=5124;strand=-1;rf=2).
249s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
249s Performing BLAST search for sequence number 254 (orf_254_start=4819;end=4926;strand=-1;rf=2).
249s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
249s Performing BLAST search for sequence number 255 (orf_255_start=4618;end=4794;strand=-1;rf=2).
249s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
249s Performing BLAST search for sequence number 256 (orf_256_start=4351;end=4473;strand=-1;rf=2).
249s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
249s Performing BLAST search for sequence number 257 (orf_257_start=4174;end=4263;strand=-1;rf=2).
249s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
249s Performing BLAST search for sequence number 258 (orf_258_start=3781;end=3930;strand=-1;rf=2).
249s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
249s Performing BLAST search for sequence number 259 (orf_259_start=3508;end=3702;strand=-1;rf=2).
249s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
249s Writing HSP to file.
249s Performing BLAST search for sequence number 260 (orf_260_start=3430;end=3507;strand=-1;rf=2).
249s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
249s Writing HSP to file.
249s Performing BLAST search for sequence number 261 (orf_261_start=3265;end=3387;strand=-1;rf=2).
250s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
250s Writing HSP to file.
250s Performing BLAST search for sequence number 262 (orf_262_start=2788;end=2871;strand=-1;rf=2).
250s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
250s Performing BLAST search for sequence number 263 (orf_263_start=2539;end=2625;strand=-1;rf=2).
250s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
250s Performing BLAST search for sequence number 264 (orf_264_start=2218;end=2298;strand=-1;rf=2).
250s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
250s Performing BLAST search for sequence number 265 (orf_265_start=2047;end=2166;strand=-1;rf=2).
250s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
250s Writing HSP to file.
250s Performing BLAST search for sequence number 266 (orf_266_start=1894;end=2037;strand=-1;rf=2).
250s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
250s Performing BLAST search for sequence number 267 (orf_267_start=1636;end=1746;strand=-1;rf=2).
250s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
250s Performing BLAST search for sequence number 268 (orf_268_start=1420;end=1557;strand=-1;rf=2).
250s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
250s Performing BLAST search for sequence number 269 (orf_269_start=1174;end=1350;strand=-1;rf=2).
251s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
251s Performing BLAST search for sequence number 270 (orf_270_start=913;end=1074;strand=-1;rf=2).
251s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
251s Performing BLAST search for sequence number 271 (orf_271_start=370;end=573;strand=-1;rf=2).
251s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
251s Performing BLAST search for sequence number 272 (orf_272_start=202;end=357;strand=-1;rf=2).
251s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
251s Performing BLAST search for sequence number 273 (orf_273_start=1;end=93;strand=-1;rf=2).
251s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
251s Performing BLAST search for sequence number 274 (orf_274_start=15696;end=15899;strand=-1;rf=3).
251s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
251s Performing BLAST search for sequence number 275 (orf_275_start=15348;end=15470;strand=-1;rf=3).
251s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
251s Performing BLAST search for sequence number 276 (orf_276_start=15150;end=15329;strand=-1;rf=3).
251s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
251s Performing BLAST search for sequence number 277 (orf_277_start=14451;end=14558;strand=-1;rf=3).
252s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
252s Performing BLAST search for sequence number 278 (orf_278_start=14085;end=14213;strand=-1;rf=3).
252s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
252s Performing BLAST search for sequence number 279 (orf_279_start=13533;end=13622;strand=-1;rf=3).
252s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
252s Performing BLAST search for sequence number 280 (orf_280_start=13452;end=13526;strand=-1;rf=3).
252s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
252s Performing BLAST search for sequence number 281 (orf_281_start=13050;end=13181;strand=-1;rf=3).
252s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
252s Performing BLAST search for sequence number 282 (orf_282_start=12861;end=12965;strand=-1;rf=3).
252s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
252s Performing BLAST search for sequence number 283 (orf_283_start=12657;end=12785;strand=-1;rf=3).
252s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
252s Performing BLAST search for sequence number 284 (orf_284_start=12534;end=12623;strand=-1;rf=3).
252s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
252s Performing BLAST search for sequence number 285 (orf_285_start=12375;end=12494;strand=-1;rf=3).
252s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
253s Performing BLAST search for sequence number 286 (orf_286_start=12234;end=12311;strand=-1;rf=3).
253s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
253s Performing BLAST search for sequence number 287 (orf_287_start=12030;end=12113;strand=-1;rf=3).
253s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
253s Performing BLAST search for sequence number 288 (orf_288_start=11703;end=11810;strand=-1;rf=3).
253s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
253s Performing BLAST search for sequence number 289 (orf_289_start=11439;end=11570;strand=-1;rf=3).
253s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
253s Performing BLAST search for sequence number 290 (orf_290_start=11325;end=11420;strand=-1;rf=3).
253s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
253s Performing BLAST search for sequence number 291 (orf_291_start=11178;end=11297;strand=-1;rf=3).
253s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
253s Performing BLAST search for sequence number 292 (orf_292_start=11043;end=11138;strand=-1;rf=3).
253s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
253s Performing BLAST search for sequence number 293 (orf_293_start=10674;end=10763;strand=-1;rf=3).
254s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
254s Performing BLAST search for sequence number 294 (orf_294_start=10329;end=10607;strand=-1;rf=3).
254s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
254s Performing BLAST search for sequence number 295 (orf_295_start=10146;end=10229;strand=-1;rf=3).
254s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
254s Performing BLAST search for sequence number 296 (orf_296_start=9675;end=9887;strand=-1;rf=3).
254s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
254s Performing BLAST search for sequence number 297 (orf_297_start=9483;end=9605;strand=-1;rf=3).
254s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
254s Performing BLAST search for sequence number 298 (orf_298_start=9399;end=9476;strand=-1;rf=3).
254s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
254s Performing BLAST search for sequence number 299 (orf_299_start=8955;end=9221;strand=-1;rf=3).
254s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
254s Performing BLAST search for sequence number 300 (orf_300_start=8847;end=8954;strand=-1;rf=3).
254s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
254s Writing HSP to file.
254s Performing BLAST search for sequence number 301 (orf_301_start=8112;end=8195;strand=-1;rf=3).
255s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
255s Performing BLAST search for sequence number 302 (orf_302_start=8019;end=8099;strand=-1;rf=3).
255s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
255s Performing BLAST search for sequence number 303 (orf_303_start=7851;end=7943;strand=-1;rf=3).
255s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
255s Performing BLAST search for sequence number 304 (orf_304_start=7602;end=7682;strand=-1;rf=3).
255s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
255s Performing BLAST search for sequence number 305 (orf_305_start=7512;end=7598;strand=-1;rf=3).
255s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
255s Performing BLAST search for sequence number 306 (orf_306_start=7422;end=7508;strand=-1;rf=3).
255s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
255s Performing BLAST search for sequence number 307 (orf_307_start=7236;end=7406;strand=-1;rf=3).
255s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
255s Performing BLAST search for sequence number 308 (orf_308_start=6939;end=7037;strand=-1;rf=3).
255s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
255s Performing BLAST search for sequence number 309 (orf_309_start=6822;end=6914;strand=-1;rf=3).
256s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
256s Performing BLAST search for sequence number 310 (orf_310_start=6615;end=6770;strand=-1;rf=3).
256s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
256s Performing BLAST search for sequence number 311 (orf_311_start=6168;end=6311;strand=-1;rf=3).
256s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
256s Writing HSP to file.
256s Performing BLAST search for sequence number 312 (orf_312_start=5889;end=5978;strand=-1;rf=3).
256s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
256s Performing BLAST search for sequence number 313 (orf_313_start=5520;end=5756;strand=-1;rf=3).
256s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
256s Performing BLAST search for sequence number 314 (orf_314_start=5256;end=5351;strand=-1;rf=3).
256s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
256s Performing BLAST search for sequence number 315 (orf_315_start=5043;end=5198;strand=-1;rf=3).
256s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
256s Performing BLAST search for sequence number 316 (orf_316_start=4665;end=4787;strand=-1;rf=3).
256s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
256s Performing BLAST search for sequence number 317 (orf_317_start=4554;end=4649;strand=-1;rf=3).
256s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
257s Performing BLAST search for sequence number 318 (orf_318_start=4419;end=4553;strand=-1;rf=3).
257s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
257s Writing HSP to file.
257s Performing BLAST search for sequence number 319 (orf_319_start=4188;end=4412;strand=-1;rf=3).
257s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
257s Performing BLAST search for sequence number 320 (orf_320_start=3738;end=3830;strand=-1;rf=3).
257s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
257s Performing BLAST search for sequence number 321 (orf_321_start=3546;end=3638;strand=-1;rf=3).
257s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
257s Performing BLAST search for sequence number 322 (orf_322_start=3159;end=3245;strand=-1;rf=3).
257s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
257s Writing HSP to file.
257s Performing BLAST search for sequence number 323 (orf_323_start=2685;end=3080;strand=-1;rf=3).
257s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
257s Performing BLAST search for sequence number 324 (orf_324_start=2352;end=2552;strand=-1;rf=3).
257s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
257s Performing BLAST search for sequence number 325 (orf_325_start=2244;end=2324;strand=-1;rf=3).
257s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
257s Performing BLAST search for sequence number 326 (orf_326_start=2136;end=2216;strand=-1;rf=3).
258s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
258s Performing BLAST search for sequence number 327 (orf_327_start=2007;end=2090;strand=-1;rf=3).
258s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
258s Performing BLAST search for sequence number 328 (orf_328_start=1728;end=1985;strand=-1;rf=3).
258s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
258s Performing BLAST search for sequence number 329 (orf_329_start=1554;end=1652;strand=-1;rf=3).
258s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
258s Performing BLAST search for sequence number 330 (orf_330_start=1443;end=1538;strand=-1;rf=3).
258s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
258s Performing BLAST search for sequence number 331 (orf_331_start=1182;end=1256;strand=-1;rf=3).
258s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
258s Performing BLAST search for sequence number 332 (orf_332_start=1086;end=1169;strand=-1;rf=3).
258s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
258s Performing BLAST search for sequence number 333 (orf_333_start=963;end=1073;strand=-1;rf=3).
258s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
258s Performing BLAST search for sequence number 334 (orf_334_start=864;end=962;strand=-1;rf=3).
259s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
259s Performing BLAST search for sequence number 335 (orf_335_start=714;end=815;strand=-1;rf=3).
259s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
259s Performing BLAST search for sequence number 336 (orf_336_start=387;end=653;strand=-1;rf=3).
259s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
259s Performing BLAST search for sequence number 337 (orf_337_start=279;end=356;strand=-1;rf=3).
259s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
259s Performing BLAST search for sequence number 338 (orf_338_start=66;end=185;strand=-1;rf=3).
259s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
259s Open /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf.fasta_split_DNA_tblastn to view the BLAST results.
259s Performing BLAST search for sequence number 1 (orf_1_start=52;end=216;strand=1;rf=1).
259s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
259s Performing BLAST search for sequence number 2 (orf_2_start=271;end=423;strand=1;rf=1).
259s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
259s Performing BLAST search for sequence number 3 (orf_3_start=538;end=3540;strand=1;rf=1).
260s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
260s Writing HSP to file.
260s Performing BLAST search for sequence number 4 (orf_4_start=3748;end=3843;strand=1;rf=1).
260s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
260s Performing BLAST search for sequence number 5 (orf_5_start=3883;end=4098;strand=1;rf=1).
260s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
260s Performing BLAST search for sequence number 6 (orf_6_start=4111;end=4218;strand=1;rf=1).
260s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
260s Performing BLAST search for sequence number 7 (orf_7_start=4258;end=4479;strand=1;rf=1).
260s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
260s Performing BLAST search for sequence number 8 (orf_8_start=4567;end=4854;strand=1;rf=1).
260s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
260s Performing BLAST search for sequence number 9 (orf_9_start=4939;end=5136;strand=1;rf=1).
260s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
260s Performing BLAST search for sequence number 10 (orf_10_start=5158;end=5373;strand=1;rf=1).
260s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
260s Performing BLAST search for sequence number 11 (orf_11_start=5431;end=5529;strand=1;rf=1).
260s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
260s Performing BLAST search for sequence number 12 (orf_12_start=5551;end=5703;strand=1;rf=1).
261s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
261s Performing BLAST search for sequence number 13 (orf_13_start=5770;end=5985;strand=1;rf=1).
261s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
261s Performing BLAST search for sequence number 14 (orf_14_start=6019;end=6093;strand=1;rf=1).
261s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
261s Writing HSP to file.
261s Performing BLAST search for sequence number 15 (orf_15_start=6094;end=6171;strand=1;rf=1).
261s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
261s Writing HSP to file.
261s Performing BLAST search for sequence number 16 (orf_16_start=6214;end=6336;strand=1;rf=1).
261s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
261s Writing HSP to file.
261s Performing BLAST search for sequence number 17 (orf_17_start=6730;end=6813;strand=1;rf=1).
261s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
261s Performing BLAST search for sequence number 18 (orf_18_start=6976;end=7062;strand=1;rf=1).
261s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
261s Performing BLAST search for sequence number 19 (orf_19_start=7303;end=7383;strand=1;rf=1).
261s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
261s Performing BLAST search for sequence number 20 (orf_20_start=7435;end=7554;strand=1;rf=1).
262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
262s Writing HSP to file.
262s Performing BLAST search for sequence number 21 (orf_21_start=7564;end=7707;strand=1;rf=1).
262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
262s Performing BLAST search for sequence number 22 (orf_22_start=7855;end=7965;strand=1;rf=1).
262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
262s Performing BLAST search for sequence number 23 (orf_23_start=8044;end=8181;strand=1;rf=1).
262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
262s Performing BLAST search for sequence number 24 (orf_24_start=8251;end=8427;strand=1;rf=1).
262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
262s Performing BLAST search for sequence number 25 (orf_25_start=8527;end=8688;strand=1;rf=1).
262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
262s Performing BLAST search for sequence number 26 (orf_26_start=9028;end=9144;strand=1;rf=1).
262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
262s Performing BLAST search for sequence number 27 (orf_27_start=9181;end=9255;strand=1;rf=1).
262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
262s Performing BLAST search for sequence number 28 (orf_28_start=9439;end=9621;strand=1;rf=1).
262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
263s Performing BLAST search for sequence number 29 (orf_29_start=9700;end=9840;strand=1;rf=1).
263s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
263s Performing BLAST search for sequence number 30 (orf_30_start=10138;end=10494;strand=1;rf=1).
263s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
263s Performing BLAST search for sequence number 31 (orf_31_start=10495;end=10584;strand=1;rf=1).
263s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
263s Performing BLAST search for sequence number 32 (orf_32_start=10687;end=10767;strand=1;rf=1).
263s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
263s Performing BLAST search for sequence number 33 (orf_33_start=10819;end=10980;strand=1;rf=1).
263s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
263s Performing BLAST search for sequence number 34 (orf_34_start=11008;end=11085;strand=1;rf=1).
263s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
263s Performing BLAST search for sequence number 35 (orf_35_start=11164;end=11238;strand=1;rf=1).
263s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
263s Performing BLAST search for sequence number 36 (orf_36_start=11569;end=11742;strand=1;rf=1).
263s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
263s Performing BLAST search for sequence number 37 (orf_37_start=11743;end=11976;strand=1;rf=1).
264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
264s Performing BLAST search for sequence number 38 (orf_38_start=12028;end=12132;strand=1;rf=1).
264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
264s Performing BLAST search for sequence number 39 (orf_39_start=12226;end=12333;strand=1;rf=1).
264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
264s Performing BLAST search for sequence number 40 (orf_40_start=12349;end=12537;strand=1;rf=1).
264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
264s Performing BLAST search for sequence number 41 (orf_41_start=12544;end=12678;strand=1;rf=1).
264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
264s Performing BLAST search for sequence number 42 (orf_42_start=12955;end=13035;strand=1;rf=1).
264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
264s Performing BLAST search for sequence number 43 (orf_43_start=13198;end=13362;strand=1;rf=1).
264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
264s Performing BLAST search for sequence number 44 (orf_44_start=13426;end=13536;strand=1;rf=1).
264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
264s Performing BLAST search for sequence number 45 (orf_45_start=13558;end=13674;strand=1;rf=1).
265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
265s Performing BLAST search for sequence number 46 (orf_46_start=13825;end=13962;strand=1;rf=1).
265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
265s Performing BLAST search for sequence number 47 (orf_47_start=14029;end=14121;strand=1;rf=1).
265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
265s Performing BLAST search for sequence number 48 (orf_48_start=14389;end=14586;strand=1;rf=1).
265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
265s Performing BLAST search for sequence number 49 (orf_49_start=14764;end=14850;strand=1;rf=1).
265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
265s Performing BLAST search for sequence number 50 (orf_50_start=14866;end=15039;strand=1;rf=1).
265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
265s Performing BLAST search for sequence number 51 (orf_51_start=15256;end=15333;strand=1;rf=1).
265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
265s Performing BLAST search for sequence number 52 (orf_52_start=15463;end=15561;strand=1;rf=1).
265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
265s Performing BLAST search for sequence number 53 (orf_53_start=15688;end=15873;strand=1;rf=1).
265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
265s Performing BLAST search for sequence number 54 (orf_54_start=15886;end=15966;strand=1;rf=1).
266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
266s Performing BLAST search for sequence number 55 (orf_55_start=221;end=373;strand=1;rf=2).
266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
266s Performing BLAST search for sequence number 56 (orf_56_start=377;end=541;strand=1;rf=2).
266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
266s Performing BLAST search for sequence number 57 (orf_57_start=545;end=646;strand=1;rf=2).
266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
266s Performing BLAST search for sequence number 58 (orf_58_start=647;end=754;strand=1;rf=2).
266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
266s Writing HSP to file.
266s Performing BLAST search for sequence number 59 (orf_59_start=1406;end=1489;strand=1;rf=2).
266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
266s Performing BLAST search for sequence number 60 (orf_60_start=1502;end=1582;strand=1;rf=2).
266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
266s Performing BLAST search for sequence number 61 (orf_61_start=1658;end=1750;strand=1;rf=2).
266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
266s Performing BLAST search for sequence number 62 (orf_62_start=1919;end=1999;strand=1;rf=2).
266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
266s Performing BLAST search for sequence number 63 (orf_63_start=2003;end=2089;strand=1;rf=2).
267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
267s Performing BLAST search for sequence number 64 (orf_64_start=2093;end=2179;strand=1;rf=2).
267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
267s Performing BLAST search for sequence number 65 (orf_65_start=2195;end=2365;strand=1;rf=2).
267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
267s Performing BLAST search for sequence number 66 (orf_66_start=2564;end=2662;strand=1;rf=2).
267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
267s Performing BLAST search for sequence number 67 (orf_67_start=2687;end=2779;strand=1;rf=2).
267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
267s Performing BLAST search for sequence number 68 (orf_68_start=2831;end=2986;strand=1;rf=2).
267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
267s Performing BLAST search for sequence number 69 (orf_69_start=3290;end=3433;strand=1;rf=2).
267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
267s Writing HSP to file.
267s Performing BLAST search for sequence number 70 (orf_70_start=3791;end=3895;strand=1;rf=2).
267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
267s Performing BLAST search for sequence number 71 (orf_71_start=3899;end=4003;strand=1;rf=2).
267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
267s Performing BLAST search for sequence number 72 (orf_72_start=4019;end=4153;strand=1;rf=2).
268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
268s Performing BLAST search for sequence number 73 (orf_73_start=4355;end=4483;strand=1;rf=2).
268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
268s Performing BLAST search for sequence number 74 (orf_74_start=4667;end=4786;strand=1;rf=2).
268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
268s Performing BLAST search for sequence number 75 (orf_75_start=4838;end=5032;strand=1;rf=2).
268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
268s Performing BLAST search for sequence number 76 (orf_76_start=5033;end=5149;strand=1;rf=2).
268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
268s Performing BLAST search for sequence number 77 (orf_77_start=5630;end=5779;strand=1;rf=2).
268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
268s Performing BLAST search for sequence number 78 (orf_78_start=5819;end=5959;strand=1;rf=2).
268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
268s Performing BLAST search for sequence number 79 (orf_79_start=6356;end=6442;strand=1;rf=2).
268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
268s Writing HSP to file.
268s Performing BLAST search for sequence number 80 (orf_80_start=6521;end=6916;strand=1;rf=2).
268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
269s Performing BLAST search for sequence number 81 (orf_81_start=7049;end=7249;strand=1;rf=2).
269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
269s Performing BLAST search for sequence number 82 (orf_82_start=7277;end=7357;strand=1;rf=2).
269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
269s Performing BLAST search for sequence number 83 (orf_83_start=7385;end=7465;strand=1;rf=2).
269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
269s Performing BLAST search for sequence number 84 (orf_84_start=7511;end=7594;strand=1;rf=2).
269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
269s Performing BLAST search for sequence number 85 (orf_85_start=7616;end=7873;strand=1;rf=2).
269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
269s Performing BLAST search for sequence number 86 (orf_86_start=7949;end=8047;strand=1;rf=2).
269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
269s Performing BLAST search for sequence number 87 (orf_87_start=8063;end=8158;strand=1;rf=2).
269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
269s Performing BLAST search for sequence number 88 (orf_88_start=8345;end=8419;strand=1;rf=2).
269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
269s Performing BLAST search for sequence number 89 (orf_89_start=8432;end=8515;strand=1;rf=2).
270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
270s Performing BLAST search for sequence number 90 (orf_90_start=8528;end=8638;strand=1;rf=2).
270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
270s Performing BLAST search for sequence number 91 (orf_91_start=8639;end=8737;strand=1;rf=2).
270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
270s Performing BLAST search for sequence number 92 (orf_92_start=8786;end=8887;strand=1;rf=2).
270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
270s Performing BLAST search for sequence number 93 (orf_93_start=8948;end=9070;strand=1;rf=2).
270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
270s Performing BLAST search for sequence number 94 (orf_94_start=9302;end=9424;strand=1;rf=2).
270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
270s Performing BLAST search for sequence number 95 (orf_95_start=9470;end=9565;strand=1;rf=2).
270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
270s Performing BLAST search for sequence number 96 (orf_96_start=9626;end=9775;strand=1;rf=2).
270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
270s Performing BLAST search for sequence number 97 (orf_97_start=10262;end=10465;strand=1;rf=2).
270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
270s Performing BLAST search for sequence number 98 (orf_98_start=10601;end=10762;strand=1;rf=2).
271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
271s Performing BLAST search for sequence number 99 (orf_99_start=10769;end=10966;strand=1;rf=2).
271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
271s Performing BLAST search for sequence number 100 (orf_100_start=11321;end=11398;strand=1;rf=2).
271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
271s Performing BLAST search for sequence number 101 (orf_101_start=11576;end=11848;strand=1;rf=2).
271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
271s Performing BLAST search for sequence number 102 (orf_102_start=11870;end=12028;strand=1;rf=2).
271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
271s Writing HSP to file.
271s Performing BLAST search for sequence number 103 (orf_103_start=12173;end=12304;strand=1;rf=2).
271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
271s Performing BLAST search for sequence number 104 (orf_104_start=12515;end=12595;strand=1;rf=2).
271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
271s Performing BLAST search for sequence number 105 (orf_105_start=12818;end=12904;strand=1;rf=2).
272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
272s Performing BLAST search for sequence number 106 (orf_106_start=13628;end=13864;strand=1;rf=2).
272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
272s Performing BLAST search for sequence number 107 (orf_107_start=13919;end=14032;strand=1;rf=2).
272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
272s Performing BLAST search for sequence number 108 (orf_108_start=14132;end=14380;strand=1;rf=2).
272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
272s Performing BLAST search for sequence number 109 (orf_109_start=14555;end=14767;strand=1;rf=2).
272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
272s Writing HSP to file.
272s Performing BLAST search for sequence number 110 (orf_110_start=14786;end=14998;strand=1;rf=2).
272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
272s Performing BLAST search for sequence number 111 (orf_111_start=15110;end=15253;strand=1;rf=2).
272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
272s Performing BLAST search for sequence number 112 (orf_112_start=15284;end=15457;strand=1;rf=2).
272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
273s Performing BLAST search for sequence number 113 (orf_113_start=15473;end=15553;strand=1;rf=2).
273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
273s Performing BLAST search for sequence number 114 (orf_114_start=15572;end=15676;strand=1;rf=2).
273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
273s Performing BLAST search for sequence number 115 (orf_115_start=15731;end=15838;strand=1;rf=2).
273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
273s Performing BLAST search for sequence number 116 (orf_116_start=15905;end=15991;strand=1;rf=2).
273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
273s Performing BLAST search for sequence number 117 (orf_117_start=450;end=548;strand=1;rf=3).
273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
273s Performing BLAST search for sequence number 118 (orf_118_start=771;end=893;strand=1;rf=3).
273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
273s Performing BLAST search for sequence number 119 (orf_119_start=981;end=1142;strand=1;rf=3).
273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
273s Performing BLAST search for sequence number 120 (orf_120_start=1359;end=1622;strand=1;rf=3).
273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
274s Performing BLAST search for sequence number 121 (orf_121_start=1722;end=1817;strand=1;rf=3).
274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
274s Performing BLAST search for sequence number 122 (orf_122_start=1926;end=2006;strand=1;rf=3).
274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
274s Performing BLAST search for sequence number 123 (orf_123_start=2283;end=2369;strand=1;rf=3).
274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
274s Performing BLAST search for sequence number 124 (orf_124_start=2466;end=2546;strand=1;rf=3).
274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
274s Performing BLAST search for sequence number 125 (orf_125_start=2553;end=2666;strand=1;rf=3).
274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
274s Performing BLAST search for sequence number 126 (orf_126_start=3054;end=3203;strand=1;rf=3).
274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
274s Writing HSP to file.
274s Performing BLAST search for sequence number 127 (orf_127_start=3279;end=3428;strand=1;rf=3).
274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
274s Writing HSP to file.
274s Performing BLAST search for sequence number 128 (orf_128_start=3537;end=3659;strand=1;rf=3).
275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
275s Performing BLAST search for sequence number 129 (orf_129_start=3840;end=3923;strand=1;rf=3).
275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
275s Performing BLAST search for sequence number 130 (orf_130_start=4485;end=4562;strand=1;rf=3).
275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
275s Performing BLAST search for sequence number 131 (orf_131_start=4590;end=4727;strand=1;rf=3).
275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
275s Performing BLAST search for sequence number 132 (orf_132_start=4851;end=4961;strand=1;rf=3).
275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
275s Performing BLAST search for sequence number 133 (orf_133_start=5121;end=5501;strand=1;rf=3).
275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
275s Performing BLAST search for sequence number 134 (orf_134_start=5538;end=5633;strand=1;rf=3).
275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
275s Performing BLAST search for sequence number 135 (orf_135_start=5634;end=5888;strand=1;rf=3).
275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
275s Performing BLAST search for sequence number 136 (orf_136_start=6072;end=6185;strand=1;rf=3).
276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
276s Writing HSP to file.
276s Performing BLAST search for sequence number 137 (orf_137_start=6207;end=6347;strand=1;rf=3).
276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
276s Writing HSP to file.
276s Performing BLAST search for sequence number 138 (orf_138_start=6450;end=6524;strand=1;rf=3).
276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
276s Performing BLAST search for sequence number 139 (orf_139_start=6753;end=6848;strand=1;rf=3).
276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
276s Performing BLAST search for sequence number 140 (orf_140_start=7128;end=7235;strand=1;rf=3).
276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
276s Performing BLAST search for sequence number 141 (orf_141_start=7311;end=7394;strand=1;rf=3).
276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
276s Performing BLAST search for sequence number 142 (orf_142_start=7473;end=7679;strand=1;rf=3).
276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
276s Performing BLAST search for sequence number 143 (orf_143_start=7983;end=8066;strand=1;rf=3).
276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
276s Performing BLAST search for sequence number 144 (orf_144_start=8388;end=8495;strand=1;rf=3).
277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
277s Performing BLAST search for sequence number 145 (orf_145_start=8556;end=8789;strand=1;rf=3).
277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
277s Performing BLAST search for sequence number 146 (orf_146_start=9093;end=9167;strand=1;rf=3).
277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
277s Performing BLAST search for sequence number 147 (orf_147_start=9180;end=9305;strand=1;rf=3).
277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
277s Performing BLAST search for sequence number 148 (orf_148_start=9366;end=9473;strand=1;rf=3).
277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
277s Performing BLAST search for sequence number 149 (orf_149_start=9498;end=9662;strand=1;rf=3).
277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
277s Performing BLAST search for sequence number 150 (orf_150_start=9663;end=9821;strand=1;rf=3).
277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
277s Performing BLAST search for sequence number 151 (orf_151_start=9936;end=10025;strand=1;rf=3).
277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
277s Performing BLAST search for sequence number 152 (orf_152_start=10284;end=10385;strand=1;rf=3).
277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
277s Performing BLAST search for sequence number 153 (orf_153_start=10416;end=10574;strand=1;rf=3).
278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
278s Performing BLAST search for sequence number 154 (orf_154_start=10581;end=10697;strand=1;rf=3).
278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
278s Performing BLAST search for sequence number 155 (orf_155_start=10962;end=11159;strand=1;rf=3).
278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
278s Performing BLAST search for sequence number 156 (orf_156_start=11286;end=11450;strand=1;rf=3).
278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
278s Performing BLAST search for sequence number 157 (orf_157_start=11550;end=11681;strand=1;rf=3).
278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
278s Performing BLAST search for sequence number 158 (orf_158_start=11709;end=11891;strand=1;rf=3).
278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
278s Performing BLAST search for sequence number 159 (orf_159_start=12123;end=12203;strand=1;rf=3).
278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
278s Performing BLAST search for sequence number 160 (orf_160_start=12288;end=12365;strand=1;rf=3).
278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
278s Performing BLAST search for sequence number 161 (orf_161_start=12465;end=12554;strand=1;rf=3).
279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
279s Performing BLAST search for sequence number 162 (orf_162_start=12558;end=12866;strand=1;rf=3).
279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
279s Performing BLAST search for sequence number 163 (orf_163_start=12885;end=12959;strand=1;rf=3).
279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
279s Performing BLAST search for sequence number 164 (orf_164_start=13104;end=13247;strand=1;rf=3).
279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
279s Performing BLAST search for sequence number 165 (orf_165_start=13254;end=13370;strand=1;rf=3).
279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
279s Performing BLAST search for sequence number 166 (orf_166_start=13887;end=13997;strand=1;rf=3).
279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
279s Performing BLAST search for sequence number 167 (orf_167_start=14103;end=14198;strand=1;rf=3).
279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
279s Performing BLAST search for sequence number 168 (orf_168_start=14226;end=14336;strand=1;rf=3).
279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
279s Performing BLAST search for sequence number 169 (orf_169_start=14631;end=14717;strand=1;rf=3).
279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
279s Performing BLAST search for sequence number 170 (orf_170_start=14895;end=15074;strand=1;rf=3).
280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
280s Performing BLAST search for sequence number 171 (orf_171_start=15129;end=15215;strand=1;rf=3).
280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
280s Performing BLAST search for sequence number 172 (orf_172_start=15429;end=15506;strand=1;rf=3).
280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
280s Performing BLAST search for sequence number 173 (orf_173_start=15600;end=15695;strand=1;rf=3).
280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
280s Performing BLAST search for sequence number 174 (orf_174_start=15590;end=15679;strand=-1;rf=1).
280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
280s Performing BLAST search for sequence number 175 (orf_175_start=15356;end=15448;strand=-1;rf=1).
280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
280s Performing BLAST search for sequence number 176 (orf_176_start=14987;end=15082;strand=-1;rf=1).
280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
280s Performing BLAST search for sequence number 177 (orf_177_start=14399;end=14575;strand=-1;rf=1).
280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
280s Performing BLAST search for sequence number 178 (orf_178_start=14195;end=14329;strand=-1;rf=1).
281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
281s Performing BLAST search for sequence number 179 (orf_179_start=14027;end=14104;strand=-1;rf=1).
281s Performing BLAST search for sequence number 180 (orf_180_start=13835;end=14017;strand=-1;rf=1).
281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
281s Performing BLAST search for sequence number 181 (orf_181_start=13736;end=13822;strand=-1;rf=1).
281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
281s Performing BLAST search for sequence number 182 (orf_182_start=13475;end=13666;strand=-1;rf=1).
281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
281s Writing HSP to file.
281s Performing BLAST search for sequence number 183 (orf_183_start=13244;end=13375;strand=-1;rf=1).
281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
281s Performing BLAST search for sequence number 184 (orf_184_start=13100;end=13198;strand=-1;rf=1).
281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
281s Writing HSP to file.
281s Performing BLAST search for sequence number 185 (orf_185_start=12686;end=12982;strand=-1;rf=1).
281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
281s Performing BLAST search for sequence number 186 (orf_186_start=12473;end=12550;strand=-1;rf=1).
282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
282s Performing BLAST search for sequence number 187 (orf_187_start=12305;end=12382;strand=-1;rf=1).
282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
282s Performing BLAST search for sequence number 188 (orf_188_start=11951;end=12025;strand=-1;rf=1).
282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
282s Performing BLAST search for sequence number 189 (orf_189_start=11636;end=11755;strand=-1;rf=1).
282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
282s Performing BLAST search for sequence number 190 (orf_190_start=11525;end=11632;strand=-1;rf=1).
282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
282s Performing BLAST search for sequence number 191 (orf_191_start=11156;end=11350;strand=-1;rf=1).
282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
282s Performing BLAST search for sequence number 192 (orf_192_start=10841;end=11092;strand=-1;rf=1).
282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
282s Performing BLAST search for sequence number 193 (orf_193_start=10694;end=10822;strand=-1;rf=1).
282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
282s Performing BLAST search for sequence number 194 (orf_194_start=10604;end=10681;strand=-1;rf=1).
282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
282s Performing BLAST search for sequence number 195 (orf_195_start=10439;end=10597;strand=-1;rf=1).
283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
283s Performing BLAST search for sequence number 196 (orf_196_start=9461;end=9550;strand=-1;rf=1).
283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
283s Performing BLAST search for sequence number 197 (orf_197_start=9278;end=9439;strand=-1;rf=1).
283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
283s Performing BLAST search for sequence number 198 (orf_198_start=9164;end=9262;strand=-1;rf=1).
283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
283s Performing BLAST search for sequence number 199 (orf_199_start=8708;end=8830;strand=-1;rf=1).
283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
283s Performing BLAST search for sequence number 200 (orf_200_start=8459;end=8620;strand=-1;rf=1).
283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
283s Performing BLAST search for sequence number 201 (orf_201_start=7979;end=8242;strand=-1;rf=1).
283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
283s Performing BLAST search for sequence number 202 (orf_202_start=7784;end=7879;strand=-1;rf=1).
283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
283s Performing BLAST search for sequence number 203 (orf_203_start=7595;end=7675;strand=-1;rf=1).
284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
284s Performing BLAST search for sequence number 204 (orf_204_start=7232;end=7318;strand=-1;rf=1).
284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
284s Performing BLAST search for sequence number 205 (orf_205_start=7055;end=7135;strand=-1;rf=1).
284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
284s Performing BLAST search for sequence number 206 (orf_206_start=6935;end=7048;strand=-1;rf=1).
284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
284s Performing BLAST search for sequence number 207 (orf_207_start=6398;end=6547;strand=-1;rf=1).
284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
284s Writing HSP to file.
284s Performing BLAST search for sequence number 208 (orf_208_start=6173;end=6322;strand=-1;rf=1).
284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
284s Writing HSP to file.
284s Performing BLAST search for sequence number 209 (orf_209_start=5867;end=5947;strand=-1;rf=1).
284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
284s Performing BLAST search for sequence number 210 (orf_210_start=5555;end=5758;strand=-1;rf=1).
284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
284s Performing BLAST search for sequence number 211 (orf_211_start=5195;end=5539;strand=-1;rf=1).
284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
285s Performing BLAST search for sequence number 212 (orf_212_start=5018;end=5188;strand=-1;rf=1).
285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
285s Performing BLAST search for sequence number 213 (orf_213_start=4835;end=5005;strand=-1;rf=1).
285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
285s Performing BLAST search for sequence number 214 (orf_214_start=4139;end=4228;strand=-1;rf=1).
285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
285s Performing BLAST search for sequence number 215 (orf_215_start=3416;end=3529;strand=-1;rf=1).
285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
285s Writing HSP to file.
285s Performing BLAST search for sequence number 216 (orf_216_start=3254;end=3394;strand=-1;rf=1).
285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
285s Writing HSP to file.
285s Performing BLAST search for sequence number 217 (orf_217_start=3077;end=3151;strand=-1;rf=1).
285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
285s Performing BLAST search for sequence number 218 (orf_218_start=2753;end=2848;strand=-1;rf=1).
285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
285s Performing BLAST search for sequence number 219 (orf_219_start=2366;end=2473;strand=-1;rf=1).
285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
285s Performing BLAST search for sequence number 220 (orf_220_start=2207;end=2290;strand=-1;rf=1).
286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
286s Performing BLAST search for sequence number 221 (orf_221_start=1922;end=2128;strand=-1;rf=1).
286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
286s Performing BLAST search for sequence number 222 (orf_222_start=1535;end=1618;strand=-1;rf=1).
286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
286s Performing BLAST search for sequence number 223 (orf_223_start=1106;end=1213;strand=-1;rf=1).
286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
286s Performing BLAST search for sequence number 224 (orf_224_start=812;end=1045;strand=-1;rf=1).
286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
286s Performing BLAST search for sequence number 225 (orf_225_start=15673;end=15855;strand=-1;rf=2).
286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
286s Performing BLAST search for sequence number 226 (orf_226_start=15445;end=15549;strand=-1;rf=2).
286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
286s Writing HSP to file.
286s Performing BLAST search for sequence number 227 (orf_227_start=15250;end=15381;strand=-1;rf=2).
286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
286s Performing BLAST search for sequence number 228 (orf_228_start=14842;end=15213;strand=-1;rf=2).
287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
287s Performing BLAST search for sequence number 229 (orf_229_start=14536;end=14799;strand=-1;rf=2).
287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
287s Performing BLAST search for sequence number 230 (orf_230_start=14254;end=14364;strand=-1;rf=2).
287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
287s Performing BLAST search for sequence number 231 (orf_231_start=13921;end=14112;strand=-1;rf=2).
287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
287s Performing BLAST search for sequence number 232 (orf_232_start=13618;end=13869;strand=-1;rf=2).
287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
287s Performing BLAST search for sequence number 233 (orf_233_start=13459;end=13545;strand=-1;rf=2).
287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
287s Performing BLAST search for sequence number 234 (orf_234_start=13255;end=13455;strand=-1;rf=2).
287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
287s Performing BLAST search for sequence number 235 (orf_235_start=13165;end=13242;strand=-1;rf=2).
287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
287s Performing BLAST search for sequence number 236 (orf_236_start=12442;end=12588;strand=-1;rf=2).
288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
288s Performing BLAST search for sequence number 237 (orf_237_start=12133;end=12378;strand=-1;rf=2).
288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
288s Performing BLAST search for sequence number 238 (orf_238_start=12025;end=12105;strand=-1;rf=2).
288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
288s Performing BLAST search for sequence number 239 (orf_239_start=11629;end=11958;strand=-1;rf=2).
288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
288s Performing BLAST search for sequence number 240 (orf_240_start=11434;end=11595;strand=-1;rf=2).
288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
288s Performing BLAST search for sequence number 241 (orf_241_start=11170;end=11244;strand=-1;rf=2).
288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
288s Performing BLAST search for sequence number 242 (orf_242_start=11053;end=11136;strand=-1;rf=2).
288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
288s Performing BLAST search for sequence number 243 (orf_243_start=10759;end=10881;strand=-1;rf=2).
288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
288s Performing BLAST search for sequence number 244 (orf_244_start=10618;end=10740;strand=-1;rf=2).
288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
288s Performing BLAST search for sequence number 245 (orf_245_start=10243;end=10356;strand=-1;rf=2).
289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
289s Performing BLAST search for sequence number 246 (orf_246_start=9961;end=10050;strand=-1;rf=2).
289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
289s Performing BLAST search for sequence number 247 (orf_247_start=9655;end=9732;strand=-1;rf=2).
289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
289s Performing BLAST search for sequence number 248 (orf_248_start=9490;end=9642;strand=-1;rf=2).
289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
289s Performing BLAST search for sequence number 249 (orf_249_start=9340;end=9489;strand=-1;rf=2).
289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
289s Performing BLAST search for sequence number 250 (orf_250_start=6061;end=9060;strand=-1;rf=2).
289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
289s Writing HSP to file.
289s Performing BLAST search for sequence number 251 (orf_251_start=5962;end=6039;strand=-1;rf=2).
289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
289s Performing BLAST search for sequence number 252 (orf_252_start=5704;end=5925;strand=-1;rf=2).
289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
290s Performing BLAST search for sequence number 253 (orf_253_start=4951;end=5124;strand=-1;rf=2).
290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
290s Performing BLAST search for sequence number 254 (orf_254_start=4819;end=4926;strand=-1;rf=2).
290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
290s Performing BLAST search for sequence number 255 (orf_255_start=4618;end=4794;strand=-1;rf=2).
290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
290s Performing BLAST search for sequence number 256 (orf_256_start=4351;end=4473;strand=-1;rf=2).
290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
290s Performing BLAST search for sequence number 257 (orf_257_start=4174;end=4263;strand=-1;rf=2).
290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
290s Performing BLAST search for sequence number 258 (orf_258_start=3781;end=3930;strand=-1;rf=2).
290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
290s Performing BLAST search for sequence number 259 (orf_259_start=3508;end=3702;strand=-1;rf=2).
290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
290s Writing HSP to file.
290s Performing BLAST search for sequence number 260 (orf_260_start=3430;end=3507;strand=-1;rf=2).
290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
290s Writing HSP to file.
290s Performing BLAST search for sequence number 261 (orf_261_start=3265;end=3387;strand=-1;rf=2).
291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
291s Writing HSP to file.
291s Performing BLAST search for sequence number 262 (orf_262_start=2788;end=2871;strand=-1;rf=2).
291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
291s Performing BLAST search for sequence number 263 (orf_263_start=2539;end=2625;strand=-1;rf=2).
291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
291s Performing BLAST search for sequence number 264 (orf_264_start=2218;end=2298;strand=-1;rf=2).
291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
291s Performing BLAST search for sequence number 265 (orf_265_start=2047;end=2166;strand=-1;rf=2).
291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
291s Writing HSP to file.
291s Performing BLAST search for sequence number 266 (orf_266_start=1894;end=2037;strand=-1;rf=2).
291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
291s Performing BLAST search for sequence number 267 (orf_267_start=1636;end=1746;strand=-1;rf=2).
291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
291s Performing BLAST search for sequence number 268 (orf_268_start=1420;end=1557;strand=-1;rf=2).
291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
291s Performing BLAST search for sequence number 269 (orf_269_start=1174;end=1350;strand=-1;rf=2).
292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
292s Performing BLAST search for sequence number 270 (orf_270_start=913;end=1074;strand=-1;rf=2).
292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
292s Performing BLAST search for sequence number 271 (orf_271_start=370;end=573;strand=-1;rf=2).
292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
292s Performing BLAST search for sequence number 272 (orf_272_start=202;end=357;strand=-1;rf=2).
292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
292s Performing BLAST search for sequence number 273 (orf_273_start=1;end=93;strand=-1;rf=2).
292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
292s Performing BLAST search for sequence number 274 (orf_274_start=15696;end=15899;strand=-1;rf=3).
292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
292s Performing BLAST search for sequence number 275 (orf_275_start=15348;end=15470;strand=-1;rf=3).
292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
292s Performing BLAST search for sequence number 276 (orf_276_start=15150;end=15329;strand=-1;rf=3).
292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
292s Performing BLAST search for sequence number 277 (orf_277_start=14451;end=14558;strand=-1;rf=3).
292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
292s Performing BLAST search for sequence number 278 (orf_278_start=14085;end=14213;strand=-1;rf=3).
293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
293s Performing BLAST search for sequence number 279 (orf_279_start=13533;end=13622;strand=-1;rf=3).
293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
293s Performing BLAST search for sequence number 280 (orf_280_start=13452;end=13526;strand=-1;rf=3).
293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
293s Performing BLAST search for sequence number 281 (orf_281_start=13050;end=13181;strand=-1;rf=3).
293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
293s Performing BLAST search for sequence number 282 (orf_282_start=12861;end=12965;strand=-1;rf=3).
293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
293s Performing BLAST search for sequence number 283 (orf_283_start=12657;end=12785;strand=-1;rf=3).
293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
293s Performing BLAST search for sequence number 284 (orf_284_start=12534;end=12623;strand=-1;rf=3).
293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
293s Performing BLAST search for sequence number 285 (orf_285_start=12375;end=12494;strand=-1;rf=3).
293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
293s Performing BLAST search for sequence number 286 (orf_286_start=12234;end=12311;strand=-1;rf=3).
294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
294s Performing BLAST search for sequence number 287 (orf_287_start=12030;end=12113;strand=-1;rf=3).
294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
294s Performing BLAST search for sequence number 288 (orf_288_start=11703;end=11810;strand=-1;rf=3).
294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
294s Performing BLAST search for sequence number 289 (orf_289_start=11439;end=11570;strand=-1;rf=3).
294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
294s Performing BLAST search for sequence number 290 (orf_290_start=11325;end=11420;strand=-1;rf=3).
294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
294s Performing BLAST search for sequence number 291 (orf_291_start=11178;end=11297;strand=-1;rf=3).
294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
294s Performing BLAST search for sequence number 292 (orf_292_start=11043;end=11138;strand=-1;rf=3).
294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
294s Performing BLAST search for sequence number 293 (orf_293_start=10674;end=10763;strand=-1;rf=3).
294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
294s Performing BLAST search for sequence number 294 (orf_294_start=10329;end=10607;strand=-1;rf=3).
295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
295s Performing BLAST search for sequence number 295 (orf_295_start=10146;end=10229;strand=-1;rf=3).
295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
295s Performing BLAST search for sequence number 296 (orf_296_start=9675;end=9887;strand=-1;rf=3).
295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
295s Performing BLAST search for sequence number 297 (orf_297_start=9483;end=9605;strand=-1;rf=3).
295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
295s Performing BLAST search for sequence number 298 (orf_298_start=9399;end=9476;strand=-1;rf=3).
295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
295s Performing BLAST search for sequence number 299 (orf_299_start=8955;end=9221;strand=-1;rf=3).
295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
295s Performing BLAST search for sequence number 300 (orf_300_start=8847;end=8954;strand=-1;rf=3).
295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
295s Writing HSP to file.
295s Performing BLAST search for sequence number 301 (orf_301_start=8112;end=8195;strand=-1;rf=3).
295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
295s Performing BLAST search for sequence number 302 (orf_302_start=8019;end=8099;strand=-1;rf=3).
296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
296s Performing BLAST search for sequence number 303 (orf_303_start=7851;end=7943;strand=-1;rf=3).
296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
296s Performing BLAST search for sequence number 304 (orf_304_start=7602;end=7682;strand=-1;rf=3).
296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
296s Performing BLAST search for sequence number 305 (orf_305_start=7512;end=7598;strand=-1;rf=3).
296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
296s Performing BLAST search for sequence number 306 (orf_306_start=7422;end=7508;strand=-1;rf=3).
296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
296s Performing BLAST search for sequence number 307 (orf_307_start=7236;end=7406;strand=-1;rf=3).
296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
296s Performing BLAST search for sequence number 308 (orf_308_start=6939;end=7037;strand=-1;rf=3).
296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
296s Performing BLAST search for sequence number 309 (orf_309_start=6822;end=6914;strand=-1;rf=3).
296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
296s Performing BLAST search for sequence number 310 (orf_310_start=6615;end=6770;strand=-1;rf=3).
296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
296s Performing BLAST search for sequence number 311 (orf_311_start=6168;end=6311;strand=-1;rf=3).
297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
297s Writing HSP to file.
297s Performing BLAST search for sequence number 312 (orf_312_start=5889;end=5978;strand=-1;rf=3).
297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
297s Performing BLAST search for sequence number 313 (orf_313_start=5520;end=5756;strand=-1;rf=3).
297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
297s Performing BLAST search for sequence number 314 (orf_314_start=5256;end=5351;strand=-1;rf=3).
297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
297s Performing BLAST search for sequence number 315 (orf_315_start=5043;end=5198;strand=-1;rf=3).
297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
297s Performing BLAST search for sequence number 316 (orf_316_start=4665;end=4787;strand=-1;rf=3).
297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
297s Performing BLAST search for sequence number 317 (orf_317_start=4554;end=4649;strand=-1;rf=3).
297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
297s Performing BLAST search for sequence number 318 (orf_318_start=4419;end=4553;strand=-1;rf=3).
297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
297s Writing HSP to file.
297s Performing BLAST search for sequence number 319 (orf_319_start=4188;end=4412;strand=-1;rf=3).
297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
298s Performing BLAST search for sequence number 320 (orf_320_start=3738;end=3830;strand=-1;rf=3).
298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
298s Performing BLAST search for sequence number 321 (orf_321_start=3546;end=3638;strand=-1;rf=3).
298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
298s Performing BLAST search for sequence number 322 (orf_322_start=3159;end=3245;strand=-1;rf=3).
298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
298s Writing HSP to file.
298s Performing BLAST search for sequence number 323 (orf_323_start=2685;end=3080;strand=-1;rf=3).
298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
298s Performing BLAST search for sequence number 324 (orf_324_start=2352;end=2552;strand=-1;rf=3).
298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
298s Performing BLAST search for sequence number 325 (orf_325_start=2244;end=2324;strand=-1;rf=3).
298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
298s Performing BLAST search for sequence number 326 (orf_326_start=2136;end=2216;strand=-1;rf=3).
298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
298s Performing BLAST search for sequence number 327 (orf_327_start=2007;end=2090;strand=-1;rf=3).
298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
298s Performing BLAST search for sequence number 328 (orf_328_start=1728;end=1985;strand=-1;rf=3).
299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
299s Performing BLAST search for sequence number 329 (orf_329_start=1554;end=1652;strand=-1;rf=3).
299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
299s Performing BLAST search for sequence number 330 (orf_330_start=1443;end=1538;strand=-1;rf=3).
299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
299s Performing BLAST search for sequence number 331 (orf_331_start=1182;end=1256;strand=-1;rf=3).
299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
299s Performing BLAST search for sequence number 332 (orf_332_start=1086;end=1169;strand=-1;rf=3).
299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
299s Performing BLAST search for sequence number 333 (orf_333_start=963;end=1073;strand=-1;rf=3).
299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
299s Performing BLAST search for sequence number 334 (orf_334_start=864;end=962;strand=-1;rf=3).
299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
299s Performing BLAST search for sequence number 335 (orf_335_start=714;end=815;strand=-1;rf=3).
299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
299s Performing BLAST search for sequence number 336 (orf_336_start=387;end=653;strand=-1;rf=3).
299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
299s Performing BLAST search for sequence number 337 (orf_337_start=279;end=356;strand=-1;rf=3).
300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
300s Performing BLAST search for sequence number 338 (orf_338_start=66;end=185;strand=-1;rf=3).
300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
300s Open /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastn to view the BLAST results.
300s Performing BLAST search for sequence number 1 (orf_1_start=52;end=216;strand=1;rf=1).
300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
300s Performing BLAST search for sequence number 2 (orf_2_start=271;end=423;strand=1;rf=1).
300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
300s Performing BLAST search for sequence number 3 (orf_3_start=538;end=3540;strand=1;rf=1).
300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
300s Writing HSP to file.
300s Performing BLAST search for sequence number 4 (orf_4_start=3748;end=3843;strand=1;rf=1).
300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
300s Performing BLAST search for sequence number 5 (orf_5_start=3883;end=4098;strand=1;rf=1).
300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
300s Performing BLAST search for sequence number 6 (orf_6_start=4111;end=4218;strand=1;rf=1).
300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
300s Performing BLAST search for sequence number 7 (orf_7_start=4258;end=4479;strand=1;rf=1).
301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
301s Performing BLAST search for sequence number 8 (orf_8_start=4567;end=4854;strand=1;rf=1).
301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
301s Performing BLAST search for sequence number 9 (orf_9_start=4939;end=5136;strand=1;rf=1).
301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
301s Performing BLAST search for sequence number 10 (orf_10_start=5158;end=5373;strand=1;rf=1).
301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
301s Performing BLAST search for sequence number 11 (orf_11_start=5431;end=5529;strand=1;rf=1).
301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
301s Performing BLAST search for sequence number 12 (orf_12_start=5551;end=5703;strand=1;rf=1).
301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
301s Performing BLAST search for sequence number 13 (orf_13_start=5770;end=5985;strand=1;rf=1).
301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
301s Performing BLAST search for sequence number 14 (orf_14_start=6019;end=6093;strand=1;rf=1).
301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
301s Performing BLAST search for sequence number 15 (orf_15_start=6094;end=6171;strand=1;rf=1).
302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
302s Performing BLAST search for sequence number 16 (orf_16_start=6214;end=6336;strand=1;rf=1).
302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
302s Performing BLAST search for sequence number 17 (orf_17_start=6730;end=6813;strand=1;rf=1).
302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
302s Performing BLAST search for sequence number 18 (orf_18_start=6976;end=7062;strand=1;rf=1).
302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
302s Performing BLAST search for sequence number 19 (orf_19_start=7303;end=7383;strand=1;rf=1).
302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
302s Performing BLAST search for sequence number 20 (orf_20_start=7435;end=7554;strand=1;rf=1).
302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
302s Performing BLAST search for sequence number 21 (orf_21_start=7564;end=7707;strand=1;rf=1).
302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
302s Performing BLAST search for sequence number 22 (orf_22_start=7855;end=7965;strand=1;rf=1).
302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
302s Performing BLAST search for sequence number 23 (orf_23_start=8044;end=8181;strand=1;rf=1).
303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
303s Performing BLAST search for sequence number 24 (orf_24_start=8251;end=8427;strand=1;rf=1).
303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
303s Performing BLAST search for sequence number 25 (orf_25_start=8527;end=8688;strand=1;rf=1).
303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
303s Performing BLAST search for sequence number 26 (orf_26_start=9028;end=9144;strand=1;rf=1).
303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
303s Writing HSP to file.
303s Performing BLAST search for sequence number 27 (orf_27_start=9181;end=9255;strand=1;rf=1).
303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
303s Performing BLAST search for sequence number 28 (orf_28_start=9439;end=9621;strand=1;rf=1).
303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
303s Performing BLAST search for sequence number 29 (orf_29_start=9700;end=9840;strand=1;rf=1).
303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
303s Performing BLAST search for sequence number 30 (orf_30_start=10138;end=10494;strand=1;rf=1).
303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
303s Performing BLAST search for sequence number 31 (orf_31_start=10495;end=10584;strand=1;rf=1).
303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
304s Performing BLAST search for sequence number 32 (orf_32_start=10687;end=10767;strand=1;rf=1).
304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
304s Performing BLAST search for sequence number 33 (orf_33_start=10819;end=10980;strand=1;rf=1).
304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
304s Performing BLAST search for sequence number 34 (orf_34_start=11008;end=11085;strand=1;rf=1).
304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
304s Performing BLAST search for sequence number 35 (orf_35_start=11164;end=11238;strand=1;rf=1).
304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
304s Performing BLAST search for sequence number 36 (orf_36_start=11569;end=11742;strand=1;rf=1).
304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
304s Performing BLAST search for sequence number 37 (orf_37_start=11743;end=11976;strand=1;rf=1).
304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
304s Performing BLAST search for sequence number 38 (orf_38_start=12028;end=12132;strand=1;rf=1).
304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
304s Performing BLAST search for sequence number 39 (orf_39_start=12226;end=12333;strand=1;rf=1).
304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
304s Performing BLAST search for sequence number 40 (orf_40_start=12349;end=12537;strand=1;rf=1).
305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
305s Performing BLAST search for sequence number 41 (orf_41_start=12544;end=12678;strand=1;rf=1).
305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
305s Performing BLAST search for sequence number 42 (orf_42_start=12955;end=13035;strand=1;rf=1).
305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
305s Performing BLAST search for sequence number 43 (orf_43_start=13198;end=13362;strand=1;rf=1).
305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
305s Performing BLAST search for sequence number 44 (orf_44_start=13426;end=13536;strand=1;rf=1).
305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
305s Performing BLAST search for sequence number 45 (orf_45_start=13558;end=13674;strand=1;rf=1).
305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
305s Performing BLAST search for sequence number 46 (orf_46_start=13825;end=13962;strand=1;rf=1).
305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
305s Performing BLAST search for sequence number 47 (orf_47_start=14029;end=14121;strand=1;rf=1).
305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
305s Performing BLAST search for sequence number 48 (orf_48_start=14389;end=14586;strand=1;rf=1).
306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
306s Performing BLAST search for sequence number 49 (orf_49_start=14764;end=14850;strand=1;rf=1).
306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
306s Performing BLAST search for sequence number 50 (orf_50_start=14866;end=15039;strand=1;rf=1).
306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
306s Performing BLAST search for sequence number 51 (orf_51_start=15256;end=15333;strand=1;rf=1).
306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
306s Performing BLAST search for sequence number 52 (orf_52_start=15463;end=15561;strand=1;rf=1).
306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
306s Performing BLAST search for sequence number 53 (orf_53_start=15688;end=15873;strand=1;rf=1).
306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
306s Performing BLAST search for sequence number 54 (orf_54_start=15886;end=15966;strand=1;rf=1).
306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
306s Performing BLAST search for sequence number 55 (orf_55_start=221;end=373;strand=1;rf=2).
306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
306s Performing BLAST search for sequence number 56 (orf_56_start=377;end=541;strand=1;rf=2).
307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
307s Performing BLAST search for sequence number 57 (orf_57_start=545;end=646;strand=1;rf=2).
307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
307s Writing HSP to file.
307s Performing BLAST search for sequence number 58 (orf_58_start=647;end=754;strand=1;rf=2).
307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
307s Writing HSP to file.
307s Performing BLAST search for sequence number 59 (orf_59_start=1406;end=1489;strand=1;rf=2).
307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
307s Performing BLAST search for sequence number 60 (orf_60_start=1502;end=1582;strand=1;rf=2).
307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
307s Performing BLAST search for sequence number 61 (orf_61_start=1658;end=1750;strand=1;rf=2).
307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
307s Performing BLAST search for sequence number 62 (orf_62_start=1919;end=1999;strand=1;rf=2).
307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
307s Performing BLAST search for sequence number 63 (orf_63_start=2003;end=2089;strand=1;rf=2).
307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
307s Writing HSP to file.
307s Performing BLAST search for sequence number 64 (orf_64_start=2093;end=2179;strand=1;rf=2).
308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
308s Performing BLAST search for sequence number 65 (orf_65_start=2195;end=2365;strand=1;rf=2).
308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
308s Performing BLAST search for sequence number 66 (orf_66_start=2564;end=2662;strand=1;rf=2).
308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
308s Performing BLAST search for sequence number 67 (orf_67_start=2687;end=2779;strand=1;rf=2).
308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
308s Performing BLAST search for sequence number 68 (orf_68_start=2831;end=2986;strand=1;rf=2).
308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
308s Performing BLAST search for sequence number 69 (orf_69_start=3290;end=3433;strand=1;rf=2).
308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
308s Writing HSP to file.
308s Performing BLAST search for sequence number 70 (orf_70_start=3791;end=3895;strand=1;rf=2).
308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
308s Performing BLAST search for sequence number 71 (orf_71_start=3899;end=4003;strand=1;rf=2).
308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
308s Performing BLAST search for sequence number 72 (orf_72_start=4019;end=4153;strand=1;rf=2).
308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
308s Performing BLAST search for sequence number 73 (orf_73_start=4355;end=4483;strand=1;rf=2).
309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
309s Performing BLAST search for sequence number 74 (orf_74_start=4667;end=4786;strand=1;rf=2).
309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
309s Performing BLAST search for sequence number 75 (orf_75_start=4838;end=5032;strand=1;rf=2).
309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
309s Performing BLAST search for sequence number 76 (orf_76_start=5033;end=5149;strand=1;rf=2).
309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
309s Performing BLAST search for sequence number 77 (orf_77_start=5630;end=5779;strand=1;rf=2).
309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
309s Performing BLAST search for sequence number 78 (orf_78_start=5819;end=5959;strand=1;rf=2).
309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
309s Performing BLAST search for sequence number 79 (orf_79_start=6356;end=6442;strand=1;rf=2).
309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
309s Performing BLAST search for sequence number 80 (orf_80_start=6521;end=6916;strand=1;rf=2).
309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
309s Performing BLAST search for sequence number 81 (orf_81_start=7049;end=7249;strand=1;rf=2).
310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
310s Performing BLAST search for sequence number 82 (orf_82_start=7277;end=7357;strand=1;rf=2).
310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
310s Performing BLAST search for sequence number 83 (orf_83_start=7385;end=7465;strand=1;rf=2).
310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
310s Performing BLAST search for sequence number 84 (orf_84_start=7511;end=7594;strand=1;rf=2).
310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
310s Performing BLAST search for sequence number 85 (orf_85_start=7616;end=7873;strand=1;rf=2).
310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
310s Performing BLAST search for sequence number 86 (orf_86_start=7949;end=8047;strand=1;rf=2).
310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
310s Performing BLAST search for sequence number 87 (orf_87_start=8063;end=8158;strand=1;rf=2).
310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
310s Performing BLAST search for sequence number 88 (orf_88_start=8345;end=8419;strand=1;rf=2).
310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
310s Performing BLAST search for sequence number 89 (orf_89_start=8432;end=8515;strand=1;rf=2).
310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
310s Performing BLAST search for sequence number 90 (orf_90_start=8528;end=8638;strand=1;rf=2).
311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
311s Performing BLAST search for sequence number 91 (orf_91_start=8639;end=8737;strand=1;rf=2).
311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
311s Performing BLAST search for sequence number 92 (orf_92_start=8786;end=8887;strand=1;rf=2).
311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
311s Writing HSP to file.
311s Performing BLAST search for sequence number 93 (orf_93_start=8948;end=9070;strand=1;rf=2).
311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
311s Writing HSP to file.
311s Performing BLAST search for sequence number 94 (orf_94_start=9302;end=9424;strand=1;rf=2).
311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
311s Performing BLAST search for sequence number 95 (orf_95_start=9470;end=9565;strand=1;rf=2).
311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
311s Performing BLAST search for sequence number 96 (orf_96_start=9626;end=9775;strand=1;rf=2).
311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
311s Performing BLAST search for sequence number 97 (orf_97_start=10262;end=10465;strand=1;rf=2).
311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
311s Performing BLAST search for sequence number 98 (orf_98_start=10601;end=10762;strand=1;rf=2).
312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
312s Performing BLAST search for sequence number 99 (orf_99_start=10769;end=10966;strand=1;rf=2).
312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
312s Performing BLAST search for sequence number 100 (orf_100_start=11321;end=11398;strand=1;rf=2).
312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
312s Performing BLAST search for sequence number 101 (orf_101_start=11576;end=11848;strand=1;rf=2).
312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
312s Performing BLAST search for sequence number 102 (orf_102_start=11870;end=12028;strand=1;rf=2).
312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
312s Performing BLAST search for sequence number 103 (orf_103_start=12173;end=12304;strand=1;rf=2).
312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
312s Performing BLAST search for sequence number 104 (orf_104_start=12515;end=12595;strand=1;rf=2).
312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
312s Performing BLAST search for sequence number 105 (orf_105_start=12818;end=12904;strand=1;rf=2).
312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
312s Performing BLAST search for sequence number 106 (orf_106_start=13628;end=13864;strand=1;rf=2).
312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
313s Performing BLAST search for sequence number 107 (orf_107_start=13919;end=14032;strand=1;rf=2).
313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
313s Performing BLAST search for sequence number 108 (orf_108_start=14132;end=14380;strand=1;rf=2).
313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
313s Performing BLAST search for sequence number 109 (orf_109_start=14555;end=14767;strand=1;rf=2).
313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
313s Performing BLAST search for sequence number 110 (orf_110_start=14786;end=14998;strand=1;rf=2).
313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
313s Performing BLAST search for sequence number 111 (orf_111_start=15110;end=15253;strand=1;rf=2).
313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
313s Performing BLAST search for sequence number 112 (orf_112_start=15284;end=15457;strand=1;rf=2).
313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
313s Performing BLAST search for sequence number 113 (orf_113_start=15473;end=15553;strand=1;rf=2).
313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
313s Performing BLAST search for sequence number 114 (orf_114_start=15572;end=15676;strand=1;rf=2).
313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
313s Performing BLAST search for sequence number 115 (orf_115_start=15731;end=15838;strand=1;rf=2).
314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
314s Performing BLAST search for sequence number 116 (orf_116_start=15905;end=15991;strand=1;rf=2).
314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
314s Performing BLAST search for sequence number 117 (orf_117_start=450;end=548;strand=1;rf=3).
314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
314s Performing BLAST search for sequence number 118 (orf_118_start=771;end=893;strand=1;rf=3).
314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
314s Writing HSP to file.
314s Performing BLAST search for sequence number 119 (orf_119_start=981;end=1142;strand=1;rf=3).
314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
314s Performing BLAST search for sequence number 120 (orf_120_start=1359;end=1622;strand=1;rf=3).
314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
314s Performing BLAST search for sequence number 121 (orf_121_start=1722;end=1817;strand=1;rf=3).
314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
314s Performing BLAST search for sequence number 122 (orf_122_start=1926;end=2006;strand=1;rf=3).
314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
314s Performing BLAST search for sequence number 123 (orf_123_start=2283;end=2369;strand=1;rf=3).
315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
315s Performing BLAST search for sequence number 124 (orf_124_start=2466;end=2546;strand=1;rf=3).
315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
315s Performing BLAST search for sequence number 125 (orf_125_start=2553;end=2666;strand=1;rf=3).
315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
315s Performing BLAST search for sequence number 126 (orf_126_start=3054;end=3203;strand=1;rf=3).
315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
315s Performing BLAST search for sequence number 127 (orf_127_start=3279;end=3428;strand=1;rf=3).
315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
315s Performing BLAST search for sequence number 128 (orf_128_start=3537;end=3659;strand=1;rf=3).
315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
315s Performing BLAST search for sequence number 129 (orf_129_start=3840;end=3923;strand=1;rf=3).
315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
315s Performing BLAST search for sequence number 130 (orf_130_start=4485;end=4562;strand=1;rf=3).
315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
315s Performing BLAST search for sequence number 131 (orf_131_start=4590;end=4727;strand=1;rf=3).
316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
316s Performing BLAST search for sequence number 132 (orf_132_start=4851;end=4961;strand=1;rf=3).
316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
316s Performing BLAST search for sequence number 133 (orf_133_start=5121;end=5501;strand=1;rf=3).
316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
316s Performing BLAST search for sequence number 134 (orf_134_start=5538;end=5633;strand=1;rf=3).
316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
316s Performing BLAST search for sequence number 135 (orf_135_start=5634;end=5888;strand=1;rf=3).
316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
316s Performing BLAST search for sequence number 136 (orf_136_start=6072;end=6185;strand=1;rf=3).
316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
316s Performing BLAST search for sequence number 137 (orf_137_start=6207;end=6347;strand=1;rf=3).
316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
316s Performing BLAST search for sequence number 138 (orf_138_start=6450;end=6524;strand=1;rf=3).
316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
316s Performing BLAST search for sequence number 139 (orf_139_start=6753;end=6848;strand=1;rf=3).
316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
316s Performing BLAST search for sequence number 140 (orf_140_start=7128;end=7235;strand=1;rf=3).
317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
317s Performing BLAST search for sequence number 141 (orf_141_start=7311;end=7394;strand=1;rf=3).
317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
317s Performing BLAST search for sequence number 142 (orf_142_start=7473;end=7679;strand=1;rf=3).
317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
317s Performing BLAST search for sequence number 143 (orf_143_start=7983;end=8066;strand=1;rf=3).
317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
317s Performing BLAST search for sequence number 144 (orf_144_start=8388;end=8495;strand=1;rf=3).
317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
317s Performing BLAST search for sequence number 145 (orf_145_start=8556;end=8789;strand=1;rf=3).
317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
317s Writing HSP to file.
317s Performing BLAST search for sequence number 146 (orf_146_start=9093;end=9167;strand=1;rf=3).
317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
317s Performing BLAST search for sequence number 147 (orf_147_start=9180;end=9305;strand=1;rf=3).
317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
317s Performing BLAST search for sequence number 148 (orf_148_start=9366;end=9473;strand=1;rf=3).
318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
318s Performing BLAST search for sequence number 149 (orf_149_start=9498;end=9662;strand=1;rf=3).
318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
318s Performing BLAST search for sequence number 150 (orf_150_start=9663;end=9821;strand=1;rf=3).
318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
318s Performing BLAST search for sequence number 151 (orf_151_start=9936;end=10025;strand=1;rf=3).
318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
318s Performing BLAST search for sequence number 152 (orf_152_start=10284;end=10385;strand=1;rf=3).
318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
318s Performing BLAST search for sequence number 153 (orf_153_start=10416;end=10574;strand=1;rf=3).
318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
318s Performing BLAST search for sequence number 154 (orf_154_start=10581;end=10697;strand=1;rf=3).
318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
318s Writing HSP to file.
318s Performing BLAST search for sequence number 155 (orf_155_start=10962;end=11159;strand=1;rf=3).
318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
318s Performing BLAST search for sequence number 156 (orf_156_start=11286;end=11450;strand=1;rf=3).
319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
319s Performing BLAST search for sequence number 157 (orf_157_start=11550;end=11681;strand=1;rf=3).
319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
319s Performing BLAST search for sequence number 158 (orf_158_start=11709;end=11891;strand=1;rf=3).
319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
319s Performing BLAST search for sequence number 159 (orf_159_start=12123;end=12203;strand=1;rf=3).
319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
319s Performing BLAST search for sequence number 160 (orf_160_start=12288;end=12365;strand=1;rf=3).
319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
319s Performing BLAST search for sequence number 161 (orf_161_start=12465;end=12554;strand=1;rf=3).
319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
319s Writing HSP to file.
319s Performing BLAST search for sequence number 162 (orf_162_start=12558;end=12866;strand=1;rf=3).
319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
319s Performing BLAST search for sequence number 163 (orf_163_start=12885;end=12959;strand=1;rf=3).
319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
319s Performing BLAST search for sequence number 164 (orf_164_start=13104;end=13247;strand=1;rf=3).
320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
320s Performing BLAST search for sequence number 165 (orf_165_start=13254;end=13370;strand=1;rf=3).
320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
320s Performing BLAST search for sequence number 166 (orf_166_start=13887;end=13997;strand=1;rf=3).
320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
320s Performing BLAST search for sequence number 167 (orf_167_start=14103;end=14198;strand=1;rf=3).
320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
320s Performing BLAST search for sequence number 168 (orf_168_start=14226;end=14336;strand=1;rf=3).
320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
320s Performing BLAST search for sequence number 169 (orf_169_start=14631;end=14717;strand=1;rf=3).
320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
320s Performing BLAST search for sequence number 170 (orf_170_start=14895;end=15074;strand=1;rf=3).
320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
320s Performing BLAST search for sequence number 171 (orf_171_start=15129;end=15215;strand=1;rf=3).
320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
320s Performing BLAST search for sequence number 172 (orf_172_start=15429;end=15506;strand=1;rf=3).
321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
321s Performing BLAST search for sequence number 173 (orf_173_start=15600;end=15695;strand=1;rf=3).
321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
321s Performing BLAST search for sequence number 174 (orf_174_start=15590;end=15679;strand=-1;rf=1).
321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
321s Performing BLAST search for sequence number 175 (orf_175_start=15356;end=15448;strand=-1;rf=1).
321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
321s Performing BLAST search for sequence number 176 (orf_176_start=14987;end=15082;strand=-1;rf=1).
321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
321s Performing BLAST search for sequence number 177 (orf_177_start=14399;end=14575;strand=-1;rf=1).
321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
321s Performing BLAST search for sequence number 178 (orf_178_start=14195;end=14329;strand=-1;rf=1).
321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
321s Performing BLAST search for sequence number 179 (orf_179_start=14027;end=14104;strand=-1;rf=1).
321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
321s Performing BLAST search for sequence number 180 (orf_180_start=13835;end=14017;strand=-1;rf=1).
321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
321s Performing BLAST search for sequence number 181 (orf_181_start=13736;end=13822;strand=-1;rf=1).
322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
322s Performing BLAST search for sequence number 182 (orf_182_start=13475;end=13666;strand=-1;rf=1).
322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
322s Performing BLAST search for sequence number 183 (orf_183_start=13244;end=13375;strand=-1;rf=1).
322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
322s Performing BLAST search for sequence number 184 (orf_184_start=13100;end=13198;strand=-1;rf=1).
322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
322s Performing BLAST search for sequence number 185 (orf_185_start=12686;end=12982;strand=-1;rf=1).
322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
322s Performing BLAST search for sequence number 186 (orf_186_start=12473;end=12550;strand=-1;rf=1).
322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
322s Performing BLAST search for sequence number 187 (orf_187_start=12305;end=12382;strand=-1;rf=1).
322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
322s Performing BLAST search for sequence number 188 (orf_188_start=11951;end=12025;strand=-1;rf=1).
322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
322s Performing BLAST search for sequence number 189 (orf_189_start=11636;end=11755;strand=-1;rf=1).
323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
323s Performing BLAST search for sequence number 190 (orf_190_start=11525;end=11632;strand=-1;rf=1).
323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
323s Performing BLAST search for sequence number 191 (orf_191_start=11156;end=11350;strand=-1;rf=1).
323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
323s Performing BLAST search for sequence number 192 (orf_192_start=10841;end=11092;strand=-1;rf=1).
323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
323s Performing BLAST search for sequence number 193 (orf_193_start=10694;end=10822;strand=-1;rf=1).
323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
323s Performing BLAST search for sequence number 194 (orf_194_start=10604;end=10681;strand=-1;rf=1).
323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
323s Performing BLAST search for sequence number 195 (orf_195_start=10439;end=10597;strand=-1;rf=1).
323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
323s Performing BLAST search for sequence number 196 (orf_196_start=9461;end=9550;strand=-1;rf=1).
323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
323s Performing BLAST search for sequence number 197 (orf_197_start=9278;end=9439;strand=-1;rf=1).
324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
324s Performing BLAST search for sequence number 198 (orf_198_start=9164;end=9262;strand=-1;rf=1).
324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
324s Performing BLAST search for sequence number 199 (orf_199_start=8708;end=8830;strand=-1;rf=1).
324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
324s Writing HSP to file.
324s Performing BLAST search for sequence number 200 (orf_200_start=8459;end=8620;strand=-1;rf=1).
324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
324s Performing BLAST search for sequence number 201 (orf_201_start=7979;end=8242;strand=-1;rf=1).
324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
324s Performing BLAST search for sequence number 202 (orf_202_start=7784;end=7879;strand=-1;rf=1).
324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
324s Performing BLAST search for sequence number 203 (orf_203_start=7595;end=7675;strand=-1;rf=1).
324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
324s Performing BLAST search for sequence number 204 (orf_204_start=7232;end=7318;strand=-1;rf=1).
324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
324s Performing BLAST search for sequence number 205 (orf_205_start=7055;end=7135;strand=-1;rf=1).
324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
324s Performing BLAST search for sequence number 206 (orf_206_start=6935;end=7048;strand=-1;rf=1).
325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
325s Performing BLAST search for sequence number 207 (orf_207_start=6398;end=6547;strand=-1;rf=1).
325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
325s Performing BLAST search for sequence number 208 (orf_208_start=6173;end=6322;strand=-1;rf=1).
325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
325s Performing BLAST search for sequence number 209 (orf_209_start=5867;end=5947;strand=-1;rf=1).
325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
325s Performing BLAST search for sequence number 210 (orf_210_start=5555;end=5758;strand=-1;rf=1).
325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
325s Performing BLAST search for sequence number 211 (orf_211_start=5195;end=5539;strand=-1;rf=1).
325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
325s Performing BLAST search for sequence number 212 (orf_212_start=5018;end=5188;strand=-1;rf=1).
325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
325s Writing HSP to file.
325s Performing BLAST search for sequence number 213 (orf_213_start=4835;end=5005;strand=-1;rf=1).
325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
325s Performing BLAST search for sequence number 214 (orf_214_start=4139;end=4228;strand=-1;rf=1).
326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
326s Performing BLAST search for sequence number 215 (orf_215_start=3416;end=3529;strand=-1;rf=1).
326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
326s Performing BLAST search for sequence number 216 (orf_216_start=3254;end=3394;strand=-1;rf=1).
326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
326s Performing BLAST search for sequence number 217 (orf_217_start=3077;end=3151;strand=-1;rf=1).
326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
326s Performing BLAST search for sequence number 218 (orf_218_start=2753;end=2848;strand=-1;rf=1).
326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
326s Performing BLAST search for sequence number 219 (orf_219_start=2366;end=2473;strand=-1;rf=1).
326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
326s Performing BLAST search for sequence number 220 (orf_220_start=2207;end=2290;strand=-1;rf=1).
326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
326s Performing BLAST search for sequence number 221 (orf_221_start=1922;end=2128;strand=-1;rf=1).
326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
326s Performing BLAST search for sequence number 222 (orf_222_start=1535;end=1618;strand=-1;rf=1).
326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
326s Performing BLAST search for sequence number 223 (orf_223_start=1106;end=1213;strand=-1;rf=1).
327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
327s Performing BLAST search for sequence number 224 (orf_224_start=812;end=1045;strand=-1;rf=1).
327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
327s Writing HSP to file.
327s Performing BLAST search for sequence number 225 (orf_225_start=15673;end=15855;strand=-1;rf=2).
327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
327s Performing BLAST search for sequence number 226 (orf_226_start=15445;end=15549;strand=-1;rf=2).
327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
327s Performing BLAST search for sequence number 227 (orf_227_start=15250;end=15381;strand=-1;rf=2).
327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
327s Performing BLAST search for sequence number 228 (orf_228_start=14842;end=15213;strand=-1;rf=2).
327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
327s Performing BLAST search for sequence number 229 (orf_229_start=14536;end=14799;strand=-1;rf=2).
327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
327s Performing BLAST search for sequence number 230 (orf_230_start=14254;end=14364;strand=-1;rf=2).
327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
327s Performing BLAST search for sequence number 231 (orf_231_start=13921;end=14112;strand=-1;rf=2).
327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
327s Performing BLAST search for sequence number 232 (orf_232_start=13618;end=13869;strand=-1;rf=2).
328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
328s Performing BLAST search for sequence number 233 (orf_233_start=13459;end=13545;strand=-1;rf=2).
328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
328s Performing BLAST search for sequence number 234 (orf_234_start=13255;end=13455;strand=-1;rf=2).
328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
328s Performing BLAST search for sequence number 235 (orf_235_start=13165;end=13242;strand=-1;rf=2).
328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
328s Performing BLAST search for sequence number 236 (orf_236_start=12442;end=12588;strand=-1;rf=2).
328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
328s Performing BLAST search for sequence number 237 (orf_237_start=12133;end=12378;strand=-1;rf=2).
328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
328s Performing BLAST search for sequence number 238 (orf_238_start=12025;end=12105;strand=-1;rf=2).
328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
328s Performing BLAST search for sequence number 239 (orf_239_start=11629;end=11958;strand=-1;rf=2).
328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
328s Performing BLAST search for sequence number 240 (orf_240_start=11434;end=11595;strand=-1;rf=2).
329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
329s Performing BLAST search for sequence number 241 (orf_241_start=11170;end=11244;strand=-1;rf=2).
329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
329s Performing BLAST search for sequence number 242 (orf_242_start=11053;end=11136;strand=-1;rf=2).
329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
329s Performing BLAST search for sequence number 243 (orf_243_start=10759;end=10881;strand=-1;rf=2).
329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
329s Performing BLAST search for sequence number 244 (orf_244_start=10618;end=10740;strand=-1;rf=2).
329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
329s Performing BLAST search for sequence number 245 (orf_245_start=10243;end=10356;strand=-1;rf=2).
329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
329s Performing BLAST search for sequence number 246 (orf_246_start=9961;end=10050;strand=-1;rf=2).
329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
329s Performing BLAST search for sequence number 247 (orf_247_start=9655;end=9732;strand=-1;rf=2).
329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
329s Performing BLAST search for sequence number 248 (orf_248_start=9490;end=9642;strand=-1;rf=2).
329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
330s Performing BLAST search for sequence number 249 (orf_249_start=9340;end=9489;strand=-1;rf=2).
330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
330s Writing HSP to file.
330s Performing BLAST search for sequence number 250 (orf_250_start=6061;end=9060;strand=-1;rf=2).
330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
330s Writing HSP to file.
330s Performing BLAST search for sequence number 251 (orf_251_start=5962;end=6039;strand=-1;rf=2).
330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
330s Performing BLAST search for sequence number 252 (orf_252_start=5704;end=5925;strand=-1;rf=2).
330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
330s Performing BLAST search for sequence number 253 (orf_253_start=4951;end=5124;strand=-1;rf=2).
330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
330s Performing BLAST search for sequence number 254 (orf_254_start=4819;end=4926;strand=-1;rf=2).
330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
330s Performing BLAST search for sequence number 255 (orf_255_start=4618;end=4794;strand=-1;rf=2).
330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
330s Performing BLAST search for sequence number 256 (orf_256_start=4351;end=4473;strand=-1;rf=2).
330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
330s Performing BLAST search for sequence number 257 (orf_257_start=4174;end=4263;strand=-1;rf=2).
331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
331s Performing BLAST search for sequence number 258 (orf_258_start=3781;end=3930;strand=-1;rf=2).
331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
331s Performing BLAST search for sequence number 259 (orf_259_start=3508;end=3702;strand=-1;rf=2).
331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
331s Performing BLAST search for sequence number 260 (orf_260_start=3430;end=3507;strand=-1;rf=2).
331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
331s Performing BLAST search for sequence number 261 (orf_261_start=3265;end=3387;strand=-1;rf=2).
331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
331s Performing BLAST search for sequence number 262 (orf_262_start=2788;end=2871;strand=-1;rf=2).
331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
331s Performing BLAST search for sequence number 263 (orf_263_start=2539;end=2625;strand=-1;rf=2).
331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
331s Performing BLAST search for sequence number 264 (orf_264_start=2218;end=2298;strand=-1;rf=2).
331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
331s Performing BLAST search for sequence number 265 (orf_265_start=2047;end=2166;strand=-1;rf=2).
331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
331s Performing BLAST search for sequence number 266 (orf_266_start=1894;end=2037;strand=-1;rf=2).
332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
332s Performing BLAST search for sequence number 267 (orf_267_start=1636;end=1746;strand=-1;rf=2).
332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
332s Performing BLAST search for sequence number 268 (orf_268_start=1420;end=1557;strand=-1;rf=2).
332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
332s Performing BLAST search for sequence number 269 (orf_269_start=1174;end=1350;strand=-1;rf=2).
332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
332s Performing BLAST search for sequence number 270 (orf_270_start=913;end=1074;strand=-1;rf=2).
332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
332s Performing BLAST search for sequence number 271 (orf_271_start=370;end=573;strand=-1;rf=2).
332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
332s Writing HSP to file.
332s Performing BLAST search for sequence number 272 (orf_272_start=202;end=357;strand=-1;rf=2).
332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
332s Performing BLAST search for sequence number 273 (orf_273_start=1;end=93;strand=-1;rf=2).
333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
333s Performing BLAST search for sequence number 274 (orf_274_start=15696;end=15899;strand=-1;rf=3).
333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
333s Performing BLAST search for sequence number 275 (orf_275_start=15348;end=15470;strand=-1;rf=3).
333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
333s Performing BLAST search for sequence number 276 (orf_276_start=15150;end=15329;strand=-1;rf=3).
333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
333s Performing BLAST search for sequence number 277 (orf_277_start=14451;end=14558;strand=-1;rf=3).
333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
333s Performing BLAST search for sequence number 278 (orf_278_start=14085;end=14213;strand=-1;rf=3).
333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
333s Performing BLAST search for sequence number 279 (orf_279_start=13533;end=13622;strand=-1;rf=3).
333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
333s Performing BLAST search for sequence number 280 (orf_280_start=13452;end=13526;strand=-1;rf=3).
333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
333s Performing BLAST search for sequence number 281 (orf_281_start=13050;end=13181;strand=-1;rf=3).
334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
334s Performing BLAST search for sequence number 282 (orf_282_start=12861;end=12965;strand=-1;rf=3).
334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
334s Performing BLAST search for sequence number 283 (orf_283_start=12657;end=12785;strand=-1;rf=3).
334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
334s Performing BLAST search for sequence number 284 (orf_284_start=12534;end=12623;strand=-1;rf=3).
334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
334s Performing BLAST search for sequence number 285 (orf_285_start=12375;end=12494;strand=-1;rf=3).
334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
334s Performing BLAST search for sequence number 286 (orf_286_start=12234;end=12311;strand=-1;rf=3).
334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
334s Performing BLAST search for sequence number 287 (orf_287_start=12030;end=12113;strand=-1;rf=3).
334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
334s Performing BLAST search for sequence number 288 (orf_288_start=11703;end=11810;strand=-1;rf=3).
334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
334s Performing BLAST search for sequence number 289 (orf_289_start=11439;end=11570;strand=-1;rf=3).
335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
335s Writing HSP to file.
335s Performing BLAST search for sequence number 290 (orf_290_start=11325;end=11420;strand=-1;rf=3).
335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
335s Performing BLAST search for sequence number 291 (orf_291_start=11178;end=11297;strand=-1;rf=3).
335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
335s Performing BLAST search for sequence number 292 (orf_292_start=11043;end=11138;strand=-1;rf=3).
335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
335s Performing BLAST search for sequence number 293 (orf_293_start=10674;end=10763;strand=-1;rf=3).
335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
335s Performing BLAST search for sequence number 294 (orf_294_start=10329;end=10607;strand=-1;rf=3).
335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
335s Performing BLAST search for sequence number 295 (orf_295_start=10146;end=10229;strand=-1;rf=3).
335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
335s Performing BLAST search for sequence number 296 (orf_296_start=9675;end=9887;strand=-1;rf=3).
335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
335s Performing BLAST search for sequence number 297 (orf_297_start=9483;end=9605;strand=-1;rf=3).
336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
336s Performing BLAST search for sequence number 298 (orf_298_start=9399;end=9476;strand=-1;rf=3).
336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
336s Performing BLAST search for sequence number 299 (orf_299_start=8955;end=9221;strand=-1;rf=3).
336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
336s Writing HSP to file.
336s Performing BLAST search for sequence number 300 (orf_300_start=8847;end=8954;strand=-1;rf=3).
336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
336s Writing HSP to file.
336s Performing BLAST search for sequence number 301 (orf_301_start=8112;end=8195;strand=-1;rf=3).
336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
336s Performing BLAST search for sequence number 302 (orf_302_start=8019;end=8099;strand=-1;rf=3).
336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
336s Performing BLAST search for sequence number 303 (orf_303_start=7851;end=7943;strand=-1;rf=3).
336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
336s Performing BLAST search for sequence number 304 (orf_304_start=7602;end=7682;strand=-1;rf=3).
337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
337s Performing BLAST search for sequence number 305 (orf_305_start=7512;end=7598;strand=-1;rf=3).
337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
337s Writing HSP to file.
337s Performing BLAST search for sequence number 306 (orf_306_start=7422;end=7508;strand=-1;rf=3).
337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
337s Performing BLAST search for sequence number 307 (orf_307_start=7236;end=7406;strand=-1;rf=3).
337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
337s Performing BLAST search for sequence number 308 (orf_308_start=6939;end=7037;strand=-1;rf=3).
337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
337s Performing BLAST search for sequence number 309 (orf_309_start=6822;end=6914;strand=-1;rf=3).
337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
337s Performing BLAST search for sequence number 310 (orf_310_start=6615;end=6770;strand=-1;rf=3).
337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
337s Performing BLAST search for sequence number 311 (orf_311_start=6168;end=6311;strand=-1;rf=3).
337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
337s Writing HSP to file.
337s Performing BLAST search for sequence number 312 (orf_312_start=5889;end=5978;strand=-1;rf=3).
338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
338s Performing BLAST search for sequence number 313 (orf_313_start=5520;end=5756;strand=-1;rf=3).
338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
338s Performing BLAST search for sequence number 314 (orf_314_start=5256;end=5351;strand=-1;rf=3).
338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
338s Performing BLAST search for sequence number 315 (orf_315_start=5043;end=5198;strand=-1;rf=3).
338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
338s Performing BLAST search for sequence number 316 (orf_316_start=4665;end=4787;strand=-1;rf=3).
338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
338s Performing BLAST search for sequence number 317 (orf_317_start=4554;end=4649;strand=-1;rf=3).
338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
338s Performing BLAST search for sequence number 318 (orf_318_start=4419;end=4553;strand=-1;rf=3).
338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
338s Performing BLAST search for sequence number 319 (orf_319_start=4188;end=4412;strand=-1;rf=3).
338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
338s Performing BLAST search for sequence number 320 (orf_320_start=3738;end=3830;strand=-1;rf=3).
339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
339s Performing BLAST search for sequence number 321 (orf_321_start=3546;end=3638;strand=-1;rf=3).
339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
339s Performing BLAST search for sequence number 322 (orf_322_start=3159;end=3245;strand=-1;rf=3).
339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
339s Performing BLAST search for sequence number 323 (orf_323_start=2685;end=3080;strand=-1;rf=3).
339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
339s Performing BLAST search for sequence number 324 (orf_324_start=2352;end=2552;strand=-1;rf=3).
339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
339s Performing BLAST search for sequence number 325 (orf_325_start=2244;end=2324;strand=-1;rf=3).
339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
339s Performing BLAST search for sequence number 326 (orf_326_start=2136;end=2216;strand=-1;rf=3).
339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
339s Performing BLAST search for sequence number 327 (orf_327_start=2007;end=2090;strand=-1;rf=3).
339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
339s Performing BLAST search for sequence number 328 (orf_328_start=1728;end=1985;strand=-1;rf=3).
340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
340s Performing BLAST search for sequence number 329 (orf_329_start=1554;end=1652;strand=-1;rf=3).
340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
340s Performing BLAST search for sequence number 330 (orf_330_start=1443;end=1538;strand=-1;rf=3).
340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
340s Performing BLAST search for sequence number 331 (orf_331_start=1182;end=1256;strand=-1;rf=3).
340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
340s Performing BLAST search for sequence number 332 (orf_332_start=1086;end=1169;strand=-1;rf=3).
340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
340s Performing BLAST search for sequence number 333 (orf_333_start=963;end=1073;strand=-1;rf=3).
340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
340s Performing BLAST search for sequence number 334 (orf_334_start=864;end=962;strand=-1;rf=3).
340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
340s Performing BLAST search for sequence number 335 (orf_335_start=714;end=815;strand=-1;rf=3).
340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
340s Writing HSP to file.
340s Performing BLAST search for sequence number 336 (orf_336_start=387;end=653;strand=-1;rf=3).
341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
341s Writing HSP to file.
341s Performing BLAST search for sequence number 337 (orf_337_start=279;end=356;strand=-1;rf=3).
341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
341s Performing BLAST search for sequence number 338 (orf_338_start=66;end=185;strand=-1;rf=3).
341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
341s Open /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf.fasta_split_DNA_tblastn to view the BLAST results.
341s Performing BLAST search for sequence number 1 (orf_1_start=52;end=216;strand=1;rf=1).
341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
341s Performing BLAST search for sequence number 2 (orf_2_start=271;end=423;strand=1;rf=1).
341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
341s Performing BLAST search for sequence number 3 (orf_3_start=538;end=3540;strand=1;rf=1).
341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
341s Writing HSP to file.
341s Performing BLAST search for sequence number 4 (orf_4_start=3748;end=3843;strand=1;rf=1).
341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
341s Performing BLAST search for sequence number 5 (orf_5_start=3883;end=4098;strand=1;rf=1).
341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
341s Performing BLAST search for sequence number 6 (orf_6_start=4111;end=4218;strand=1;rf=1).
342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
342s Performing BLAST search for sequence number 7 (orf_7_start=4258;end=4479;strand=1;rf=1).
342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
342s Performing BLAST search for sequence number 8 (orf_8_start=4567;end=4854;strand=1;rf=1).
342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
342s Performing BLAST search for sequence number 9 (orf_9_start=4939;end=5136;strand=1;rf=1).
342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
342s Performing BLAST search for sequence number 10 (orf_10_start=5158;end=5373;strand=1;rf=1).
342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
342s Performing BLAST search for sequence number 11 (orf_11_start=5431;end=5529;strand=1;rf=1).
342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
342s Performing BLAST search for sequence number 12 (orf_12_start=5551;end=5703;strand=1;rf=1).
342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
342s Performing BLAST search for sequence number 13 (orf_13_start=5770;end=5985;strand=1;rf=1).
342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
342s Performing BLAST search for sequence number 14 (orf_14_start=6019;end=6093;strand=1;rf=1).
343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
343s Performing BLAST search for sequence number 15 (orf_15_start=6094;end=6171;strand=1;rf=1).
343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
343s Performing BLAST search for sequence number 16 (orf_16_start=6214;end=6336;strand=1;rf=1).
343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
343s Performing BLAST search for sequence number 17 (orf_17_start=6730;end=6813;strand=1;rf=1).
343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
343s Performing BLAST search for sequence number 18 (orf_18_start=6976;end=7062;strand=1;rf=1).
343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
343s Performing BLAST search for sequence number 19 (orf_19_start=7303;end=7383;strand=1;rf=1).
343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
343s Performing BLAST search for sequence number 20 (orf_20_start=7435;end=7554;strand=1;rf=1).
343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
343s Performing BLAST search for sequence number 21 (orf_21_start=7564;end=7707;strand=1;rf=1).
343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
343s Performing BLAST search for sequence number 22 (orf_22_start=7855;end=7965;strand=1;rf=1).
343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
343s Performing BLAST search for sequence number 23 (orf_23_start=8044;end=8181;strand=1;rf=1).
344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
344s Performing BLAST search for sequence number 24 (orf_24_start=8251;end=8427;strand=1;rf=1).
344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
344s Performing BLAST search for sequence number 25 (orf_25_start=8527;end=8688;strand=1;rf=1).
344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
344s Performing BLAST search for sequence number 26 (orf_26_start=9028;end=9144;strand=1;rf=1).
344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
344s Writing HSP to file.
344s Performing BLAST search for sequence number 27 (orf_27_start=9181;end=9255;strand=1;rf=1).
344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
344s Performing BLAST search for sequence number 28 (orf_28_start=9439;end=9621;strand=1;rf=1).
344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
344s Performing BLAST search for sequence number 29 (orf_29_start=9700;end=9840;strand=1;rf=1).
344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
344s Performing BLAST search for sequence number 30 (orf_30_start=10138;end=10494;strand=1;rf=1).
344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
344s Performing BLAST search for sequence number 31 (orf_31_start=10495;end=10584;strand=1;rf=1).
345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
345s Performing BLAST search for sequence number 32 (orf_32_start=10687;end=10767;strand=1;rf=1).
345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
345s Performing BLAST search for sequence number 33 (orf_33_start=10819;end=10980;strand=1;rf=1).
345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
345s Performing BLAST search for sequence number 34 (orf_34_start=11008;end=11085;strand=1;rf=1).
345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
345s Performing BLAST search for sequence number 35 (orf_35_start=11164;end=11238;strand=1;rf=1).
345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
345s Performing BLAST search for sequence number 36 (orf_36_start=11569;end=11742;strand=1;rf=1).
345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
345s Performing BLAST search for sequence number 37 (orf_37_start=11743;end=11976;strand=1;rf=1).
345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
345s Performing BLAST search for sequence number 38 (orf_38_start=12028;end=12132;strand=1;rf=1).
346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
346s Performing BLAST search for sequence number 39 (orf_39_start=12226;end=12333;strand=1;rf=1).
346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
346s Performing BLAST search for sequence number 40 (orf_40_start=12349;end=12537;strand=1;rf=1).
346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
346s Performing BLAST search for sequence number 41 (orf_41_start=12544;end=12678;strand=1;rf=1).
346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
346s Performing BLAST search for sequence number 42 (orf_42_start=12955;end=13035;strand=1;rf=1).
346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
346s Performing BLAST search for sequence number 43 (orf_43_start=13198;end=13362;strand=1;rf=1).
346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
346s Performing BLAST search for sequence number 44 (orf_44_start=13426;end=13536;strand=1;rf=1).
346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
346s Performing BLAST search for sequence number 45 (orf_45_start=13558;end=13674;strand=1;rf=1).
346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
346s Performing BLAST search for sequence number 46 (orf_46_start=13825;end=13962;strand=1;rf=1).
347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
347s Performing BLAST search for sequence number 47 (orf_47_start=14029;end=14121;strand=1;rf=1).
347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
347s Performing BLAST search for sequence number 48 (orf_48_start=14389;end=14586;strand=1;rf=1).
347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
347s Performing BLAST search for sequence number 49 (orf_49_start=14764;end=14850;strand=1;rf=1).
347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
347s Performing BLAST search for sequence number 50 (orf_50_start=14866;end=15039;strand=1;rf=1).
347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
347s Performing BLAST search for sequence number 51 (orf_51_start=15256;end=15333;strand=1;rf=1).
347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
347s Performing BLAST search for sequence number 52 (orf_52_start=15463;end=15561;strand=1;rf=1).
347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
347s Performing BLAST search for sequence number 53 (orf_53_start=15688;end=15873;strand=1;rf=1).
347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
347s Performing BLAST search for sequence number 54 (orf_54_start=15886;end=15966;strand=1;rf=1).
347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
347s Performing BLAST search for sequence number 55 (orf_55_start=221;end=373;strand=1;rf=2).
348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
348s Performing BLAST search for sequence number 56 (orf_56_start=377;end=541;strand=1;rf=2).
348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
348s Performing BLAST search for sequence number 57 (orf_57_start=545;end=646;strand=1;rf=2).
348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
348s Writing HSP to file.
348s Performing BLAST search for sequence number 58 (orf_58_start=647;end=754;strand=1;rf=2).
348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
348s Writing HSP to file.
348s Performing BLAST search for sequence number 59 (orf_59_start=1406;end=1489;strand=1;rf=2).
348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
348s Performing BLAST search for sequence number 60 (orf_60_start=1502;end=1582;strand=1;rf=2).
348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
348s Performing BLAST search for sequence number 61 (orf_61_start=1658;end=1750;strand=1;rf=2).
348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
348s Performing BLAST search for sequence number 62 (orf_62_start=1919;end=1999;strand=1;rf=2).
348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
348s Performing BLAST search for sequence number 63 (orf_63_start=2003;end=2089;strand=1;rf=2).
349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
349s Writing HSP to file.
349s Performing BLAST search for sequence number 64 (orf_64_start=2093;end=2179;strand=1;rf=2).
349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
349s Performing BLAST search for sequence number 65 (orf_65_start=2195;end=2365;strand=1;rf=2).
349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
349s Performing BLAST search for sequence number 66 (orf_66_start=2564;end=2662;strand=1;rf=2).
349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
349s Performing BLAST search for sequence number 67 (orf_67_start=2687;end=2779;strand=1;rf=2).
349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
349s Performing BLAST search for sequence number 68 (orf_68_start=2831;end=2986;strand=1;rf=2).
349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
349s Performing BLAST search for sequence number 69 (orf_69_start=3290;end=3433;strand=1;rf=2).
349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
349s Writing HSP to file.
349s Performing BLAST search for sequence number 70 (orf_70_start=3791;end=3895;strand=1;rf=2).
350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
350s Performing BLAST search for sequence number 71 (orf_71_start=3899;end=4003;strand=1;rf=2).
350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
350s Performing BLAST search for sequence number 72 (orf_72_start=4019;end=4153;strand=1;rf=2).
350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
350s Performing BLAST search for sequence number 73 (orf_73_start=4355;end=4483;strand=1;rf=2).
350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
350s Performing BLAST search for sequence number 74 (orf_74_start=4667;end=4786;strand=1;rf=2).
350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
350s Performing BLAST search for sequence number 75 (orf_75_start=4838;end=5032;strand=1;rf=2).
350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
350s Performing BLAST search for sequence number 76 (orf_76_start=5033;end=5149;strand=1;rf=2).
350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
350s Performing BLAST search for sequence number 77 (orf_77_start=5630;end=5779;strand=1;rf=2).
350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
350s Performing BLAST search for sequence number 78 (orf_78_start=5819;end=5959;strand=1;rf=2).
350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
350s Performing BLAST search for sequence number 79 (orf_79_start=6356;end=6442;strand=1;rf=2).
351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
351s Performing BLAST search for sequence number 80 (orf_80_start=6521;end=6916;strand=1;rf=2).
351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
351s Performing BLAST search for sequence number 81 (orf_81_start=7049;end=7249;strand=1;rf=2).
351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
351s Performing BLAST search for sequence number 82 (orf_82_start=7277;end=7357;strand=1;rf=2).
351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
351s Performing BLAST search for sequence number 83 (orf_83_start=7385;end=7465;strand=1;rf=2).
351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
351s Performing BLAST search for sequence number 84 (orf_84_start=7511;end=7594;strand=1;rf=2).
351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
351s Performing BLAST search for sequence number 85 (orf_85_start=7616;end=7873;strand=1;rf=2).
351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
351s Performing BLAST search for sequence number 86 (orf_86_start=7949;end=8047;strand=1;rf=2).
351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
351s Performing BLAST search for sequence number 87 (orf_87_start=8063;end=8158;strand=1;rf=2).
352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
352s Performing BLAST search for sequence number 88 (orf_88_start=8345;end=8419;strand=1;rf=2).
352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
352s Performing BLAST search for sequence number 89 (orf_89_start=8432;end=8515;strand=1;rf=2).
352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
352s Performing BLAST search for sequence number 90 (orf_90_start=8528;end=8638;strand=1;rf=2).
352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
352s Performing BLAST search for sequence number 91 (orf_91_start=8639;end=8737;strand=1;rf=2).
352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
352s Performing BLAST search for sequence number 92 (orf_92_start=8786;end=8887;strand=1;rf=2).
352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
352s Writing HSP to file.
352s Performing BLAST search for sequence number 93 (orf_93_start=8948;end=9070;strand=1;rf=2).
352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
352s Writing HSP to file.
352s Performing BLAST search for sequence number 94 (orf_94_start=9302;end=9424;strand=1;rf=2).
352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
352s Performing BLAST search for sequence number 95 (orf_95_start=9470;end=9565;strand=1;rf=2).
353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
353s Performing BLAST search for sequence number 96 (orf_96_start=9626;end=9775;strand=1;rf=2).
353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
353s Performing BLAST search for sequence number 97 (orf_97_start=10262;end=10465;strand=1;rf=2).
353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
353s Performing BLAST search for sequence number 98 (orf_98_start=10601;end=10762;strand=1;rf=2).
353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
353s Performing BLAST search for sequence number 99 (orf_99_start=10769;end=10966;strand=1;rf=2).
353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
353s Performing BLAST search for sequence number 100 (orf_100_start=11321;end=11398;strand=1;rf=2).
353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
353s Performing BLAST search for sequence number 101 (orf_101_start=11576;end=11848;strand=1;rf=2).
353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
353s Performing BLAST search for sequence number 102 (orf_102_start=11870;end=12028;strand=1;rf=2).
353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
353s Performing BLAST search for sequence number 103 (orf_103_start=12173;end=12304;strand=1;rf=2).
353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
353s Performing BLAST search for sequence number 104 (orf_104_start=12515;end=12595;strand=1;rf=2).
354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
354s Performing BLAST search for sequence number 105 (orf_105_start=12818;end=12904;strand=1;rf=2).
354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
354s Performing BLAST search for sequence number 106 (orf_106_start=13628;end=13864;strand=1;rf=2).
354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
354s Performing BLAST search for sequence number 107 (orf_107_start=13919;end=14032;strand=1;rf=2).
354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
354s Performing BLAST search for sequence number 108 (orf_108_start=14132;end=14380;strand=1;rf=2).
354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
354s Performing BLAST search for sequence number 109 (orf_109_start=14555;end=14767;strand=1;rf=2).
354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
354s Performing BLAST search for sequence number 110 (orf_110_start=14786;end=14998;strand=1;rf=2).
354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
354s Performing BLAST search for sequence number 111 (orf_111_start=15110;end=15253;strand=1;rf=2).
354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
354s Performing BLAST search for sequence number 112 (orf_112_start=15284;end=15457;strand=1;rf=2).
355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
355s Performing BLAST search for sequence number 113 (orf_113_start=15473;end=15553;strand=1;rf=2).
355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
355s Performing BLAST search for sequence number 114 (orf_114_start=15572;end=15676;strand=1;rf=2).
355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
355s Performing BLAST search for sequence number 115 (orf_115_start=15731;end=15838;strand=1;rf=2).
355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
355s Performing BLAST search for sequence number 116 (orf_116_start=15905;end=15991;strand=1;rf=2).
355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
355s Performing BLAST search for sequence number 117 (orf_117_start=450;end=548;strand=1;rf=3).
355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
355s Performing BLAST search for sequence number 118 (orf_118_start=771;end=893;strand=1;rf=3).
355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
355s Writing HSP to file.
355s Performing BLAST search for sequence number 119 (orf_119_start=981;end=1142;strand=1;rf=3).
355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
355s Performing BLAST search for sequence number 120 (orf_120_start=1359;end=1622;strand=1;rf=3).
356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
356s Performing BLAST search for sequence number 121 (orf_121_start=1722;end=1817;strand=1;rf=3).
356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
356s Performing BLAST search for sequence number 122 (orf_122_start=1926;end=2006;strand=1;rf=3).
356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
356s Performing BLAST search for sequence number 123 (orf_123_start=2283;end=2369;strand=1;rf=3).
356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
356s Performing BLAST search for sequence number 124 (orf_124_start=2466;end=2546;strand=1;rf=3).
356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
356s Performing BLAST search for sequence number 125 (orf_125_start=2553;end=2666;strand=1;rf=3).
356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
356s Performing BLAST search for sequence number 126 (orf_126_start=3054;end=3203;strand=1;rf=3).
356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
356s Performing BLAST search for sequence number 127 (orf_127_start=3279;end=3428;strand=1;rf=3).
356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
356s Performing BLAST search for sequence number 128 (orf_128_start=3537;end=3659;strand=1;rf=3).
356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
356s Performing BLAST search for sequence number 129 (orf_129_start=3840;end=3923;strand=1;rf=3).
357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
357s Performing BLAST search for sequence number 130 (orf_130_start=4485;end=4562;strand=1;rf=3).
357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
357s Performing BLAST search for sequence number 131 (orf_131_start=4590;end=4727;strand=1;rf=3).
357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
357s Performing BLAST search for sequence number 132 (orf_132_start=4851;end=4961;strand=1;rf=3).
357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
357s Performing BLAST search for sequence number 133 (orf_133_start=5121;end=5501;strand=1;rf=3).
357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
357s Performing BLAST search for sequence number 134 (orf_134_start=5538;end=5633;strand=1;rf=3).
357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
357s Performing BLAST search for sequence number 135 (orf_135_start=5634;end=5888;strand=1;rf=3).
357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
357s Performing BLAST search for sequence number 136 (orf_136_start=6072;end=6185;strand=1;rf=3).
357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
357s Performing BLAST search for sequence number 137 (orf_137_start=6207;end=6347;strand=1;rf=3).
357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
357s Performing BLAST search for sequence number 138 (orf_138_start=6450;end=6524;strand=1;rf=3).
358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
358s Performing BLAST search for sequence number 139 (orf_139_start=6753;end=6848;strand=1;rf=3).
358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
358s Performing BLAST search for sequence number 140 (orf_140_start=7128;end=7235;strand=1;rf=3).
358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
358s Performing BLAST search for sequence number 141 (orf_141_start=7311;end=7394;strand=1;rf=3).
358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
358s Performing BLAST search for sequence number 142 (orf_142_start=7473;end=7679;strand=1;rf=3).
358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
358s Performing BLAST search for sequence number 143 (orf_143_start=7983;end=8066;strand=1;rf=3).
358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
358s Performing BLAST search for sequence number 144 (orf_144_start=8388;end=8495;strand=1;rf=3).
358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
358s Performing BLAST search for sequence number 145 (orf_145_start=8556;end=8789;strand=1;rf=3).
358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
358s Writing HSP to file.
358s Performing BLAST search for sequence number 146 (orf_146_start=9093;end=9167;strand=1;rf=3).
358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
358s Performing BLAST search for sequence number 147 (orf_147_start=9180;end=9305;strand=1;rf=3).
359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
359s Performing BLAST search for sequence number 148 (orf_148_start=9366;end=9473;strand=1;rf=3).
359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
359s Performing BLAST search for sequence number 149 (orf_149_start=9498;end=9662;strand=1;rf=3).
359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
359s Performing BLAST search for sequence number 150 (orf_150_start=9663;end=9821;strand=1;rf=3).
359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
359s Performing BLAST search for sequence number 151 (orf_151_start=9936;end=10025;strand=1;rf=3).
359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
359s Performing BLAST search for sequence number 152 (orf_152_start=10284;end=10385;strand=1;rf=3).
359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
359s Performing BLAST search for sequence number 153 (orf_153_start=10416;end=10574;strand=1;rf=3).
359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
359s Performing BLAST search for sequence number 154 (orf_154_start=10581;end=10697;strand=1;rf=3).
359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
359s Writing HSP to file.
359s Performing BLAST search for sequence number 155 (orf_155_start=10962;end=11159;strand=1;rf=3).
360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
360s Performing BLAST search for sequence number 156 (orf_156_start=11286;end=11450;strand=1;rf=3).
360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
360s Performing BLAST search for sequence number 157 (orf_157_start=11550;end=11681;strand=1;rf=3).
360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
360s Performing BLAST search for sequence number 158 (orf_158_start=11709;end=11891;strand=1;rf=3).
360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
360s Performing BLAST search for sequence number 159 (orf_159_start=12123;end=12203;strand=1;rf=3).
360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
360s Performing BLAST search for sequence number 160 (orf_160_start=12288;end=12365;strand=1;rf=3).
360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
360s Performing BLAST search for sequence number 161 (orf_161_start=12465;end=12554;strand=1;rf=3).
360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
360s Writing HSP to file.
360s Performing BLAST search for sequence number 162 (orf_162_start=12558;end=12866;strand=1;rf=3).
360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
360s Performing BLAST search for sequence number 163 (orf_163_start=12885;end=12959;strand=1;rf=3).
360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
360s Performing BLAST search for sequence number 164 (orf_164_start=13104;end=13247;strand=1;rf=3).
361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
361s Performing BLAST search for sequence number 165 (orf_165_start=13254;end=13370;strand=1;rf=3).
361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
361s Performing BLAST search for sequence number 166 (orf_166_start=13887;end=13997;strand=1;rf=3).
361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
361s Performing BLAST search for sequence number 167 (orf_167_start=14103;end=14198;strand=1;rf=3).
361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
361s Performing BLAST search for sequence number 168 (orf_168_start=14226;end=14336;strand=1;rf=3).
361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
361s Performing BLAST search for sequence number 169 (orf_169_start=14631;end=14717;strand=1;rf=3).
361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
361s Performing BLAST search for sequence number 170 (orf_170_start=14895;end=15074;strand=1;rf=3).
361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
361s Performing BLAST search for sequence number 171 (orf_171_start=15129;end=15215;strand=1;rf=3).
361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
361s Performing BLAST search for sequence number 172 (orf_172_start=15429;end=15506;strand=1;rf=3).
361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
361s Performing BLAST search for sequence number 173 (orf_173_start=15600;end=15695;strand=1;rf=3).
362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
362s Performing BLAST search for sequence number 174 (orf_174_start=15590;end=15679;strand=-1;rf=1).
362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
362s Performing BLAST search for sequence number 175 (orf_175_start=15356;end=15448;strand=-1;rf=1).
362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
362s Performing BLAST search for sequence number 176 (orf_176_start=14987;end=15082;strand=-1;rf=1).
362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
362s Performing BLAST search for sequence number 177 (orf_177_start=14399;end=14575;strand=-1;rf=1).
362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
362s Performing BLAST search for sequence number 178 (orf_178_start=14195;end=14329;strand=-1;rf=1).
362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
362s Performing BLAST search for sequence number 179 (orf_179_start=14027;end=14104;strand=-1;rf=1).
362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
362s Performing BLAST search for sequence number 180 (orf_180_start=13835;end=14017;strand=-1;rf=1).
362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
362s Performing BLAST search for sequence number 181 (orf_181_start=13736;end=13822;strand=-1;rf=1).
363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
363s Performing BLAST search for sequence number 182 (orf_182_start=13475;end=13666;strand=-1;rf=1).
363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
363s Performing BLAST search for sequence number 183 (orf_183_start=13244;end=13375;strand=-1;rf=1).
363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
363s Performing BLAST search for sequence number 184 (orf_184_start=13100;end=13198;strand=-1;rf=1).
363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
363s Performing BLAST search for sequence number 185 (orf_185_start=12686;end=12982;strand=-1;rf=1).
363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
363s Performing BLAST search for sequence number 186 (orf_186_start=12473;end=12550;strand=-1;rf=1).
363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
363s Performing BLAST search for sequence number 187 (orf_187_start=12305;end=12382;strand=-1;rf=1).
363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
363s Performing BLAST search for sequence number 188 (orf_188_start=11951;end=12025;strand=-1;rf=1).
363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
363s Performing BLAST search for sequence number 189 (orf_189_start=11636;end=11755;strand=-1;rf=1).
364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
364s Performing BLAST search for sequence number 190 (orf_190_start=11525;end=11632;strand=-1;rf=1).
364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
364s Performing BLAST search for sequence number 191 (orf_191_start=11156;end=11350;strand=-1;rf=1).
364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
364s Performing BLAST search for sequence number 192 (orf_192_start=10841;end=11092;strand=-1;rf=1).
364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
364s Performing BLAST search for sequence number 193 (orf_193_start=10694;end=10822;strand=-1;rf=1).
364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
364s Performing BLAST search for sequence number 194 (orf_194_start=10604;end=10681;strand=-1;rf=1).
364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
364s Performing BLAST search for sequence number 195 (orf_195_start=10439;end=10597;strand=-1;rf=1).
364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
364s Performing BLAST search for sequence number 196 (orf_196_start=9461;end=9550;strand=-1;rf=1).
364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
364s Performing BLAST search for sequence number 197 (orf_197_start=9278;end=9439;strand=-1;rf=1).
364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
364s Performing BLAST search for sequence number 198 (orf_198_start=9164;end=9262;strand=-1;rf=1).
365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
365s Performing BLAST search for sequence number 199 (orf_199_start=8708;end=8830;strand=-1;rf=1).
365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
365s Writing HSP to file.
365s Performing BLAST search for sequence number 200 (orf_200_start=8459;end=8620;strand=-1;rf=1).
365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
365s Performing BLAST search for sequence number 201 (orf_201_start=7979;end=8242;strand=-1;rf=1).
365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
365s Performing BLAST search for sequence number 202 (orf_202_start=7784;end=7879;strand=-1;rf=1).
365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
365s Performing BLAST search for sequence number 203 (orf_203_start=7595;end=7675;strand=-1;rf=1).
365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
365s Performing BLAST search for sequence number 204 (orf_204_start=7232;end=7318;strand=-1;rf=1).
365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
365s Performing BLAST search for sequence number 205 (orf_205_start=7055;end=7135;strand=-1;rf=1).
365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
365s Performing BLAST search for sequence number 206 (orf_206_start=6935;end=7048;strand=-1;rf=1).
366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
366s Performing BLAST search for sequence number 207 (orf_207_start=6398;end=6547;strand=-1;rf=1).
366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
366s Performing BLAST search for sequence number 208 (orf_208_start=6173;end=6322;strand=-1;rf=1).
366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
366s Performing BLAST search for sequence number 209 (orf_209_start=5867;end=5947;strand=-1;rf=1).
366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
366s Performing BLAST search for sequence number 210 (orf_210_start=5555;end=5758;strand=-1;rf=1).
366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
366s Performing BLAST search for sequence number 211 (orf_211_start=5195;end=5539;strand=-1;rf=1).
366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
366s Performing BLAST search for sequence number 212 (orf_212_start=5018;end=5188;strand=-1;rf=1).
366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
366s Writing HSP to file.
366s Performing BLAST search for sequence number 213 (orf_213_start=4835;end=5005;strand=-1;rf=1).
366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
366s Performing BLAST search for sequence number 214 (orf_214_start=4139;end=4228;strand=-1;rf=1).
366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
366s Performing BLAST search for sequence number 215 (orf_215_start=3416;end=3529;strand=-1;rf=1).
367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
367s Performing BLAST search for sequence number 216 (orf_216_start=3254;end=3394;strand=-1;rf=1).
367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
367s Performing BLAST search for sequence number 217 (orf_217_start=3077;end=3151;strand=-1;rf=1).
367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
367s Performing BLAST search for sequence number 218 (orf_218_start=2753;end=2848;strand=-1;rf=1).
367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
367s Performing BLAST search for sequence number 219 (orf_219_start=2366;end=2473;strand=-1;rf=1).
367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
367s Performing BLAST search for sequence number 220 (orf_220_start=2207;end=2290;strand=-1;rf=1).
367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
367s Performing BLAST search for sequence number 221 (orf_221_start=1922;end=2128;strand=-1;rf=1).
367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
367s Performing BLAST search for sequence number 222 (orf_222_start=1535;end=1618;strand=-1;rf=1).
367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
367s Performing BLAST search for sequence number 223 (orf_223_start=1106;end=1213;strand=-1;rf=1).
367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
368s Performing BLAST search for sequence number 224 (orf_224_start=812;end=1045;strand=-1;rf=1).
368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
368s Writing HSP to file.
368s Performing BLAST search for sequence number 225 (orf_225_start=15673;end=15855;strand=-1;rf=2).
368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
368s Performing BLAST search for sequence number 226 (orf_226_start=15445;end=15549;strand=-1;rf=2).
368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
368s Performing BLAST search for sequence number 227 (orf_227_start=15250;end=15381;strand=-1;rf=2).
368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
368s Performing BLAST search for sequence number 228 (orf_228_start=14842;end=15213;strand=-1;rf=2).
368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
368s Performing BLAST search for sequence number 229 (orf_229_start=14536;end=14799;strand=-1;rf=2).
368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
368s Performing BLAST search for sequence number 230 (orf_230_start=14254;end=14364;strand=-1;rf=2).
368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
368s Performing BLAST search for sequence number 231 (orf_231_start=13921;end=14112;strand=-1;rf=2).
368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
368s Performing BLAST search for sequence number 232 (orf_232_start=13618;end=13869;strand=-1;rf=2).
369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
369s Performing BLAST search for sequence number 233 (orf_233_start=13459;end=13545;strand=-1;rf=2).
369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
369s Performing BLAST search for sequence number 234 (orf_234_start=13255;end=13455;strand=-1;rf=2).
369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
369s Performing BLAST search for sequence number 235 (orf_235_start=13165;end=13242;strand=-1;rf=2).
369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
369s Performing BLAST search for sequence number 236 (orf_236_start=12442;end=12588;strand=-1;rf=2).
369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
369s Performing BLAST search for sequence number 237 (orf_237_start=12133;end=12378;strand=-1;rf=2).
369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
369s Performing BLAST search for sequence number 238 (orf_238_start=12025;end=12105;strand=-1;rf=2).
369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
369s Performing BLAST search for sequence number 239 (orf_239_start=11629;end=11958;strand=-1;rf=2).
369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
369s Performing BLAST search for sequence number 240 (orf_240_start=11434;end=11595;strand=-1;rf=2).
370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
370s Performing BLAST search for sequence number 241 (orf_241_start=11170;end=11244;strand=-1;rf=2).
370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
370s Performing BLAST search for sequence number 242 (orf_242_start=11053;end=11136;strand=-1;rf=2).
370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
370s Performing BLAST search for sequence number 243 (orf_243_start=10759;end=10881;strand=-1;rf=2).
370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
370s Performing BLAST search for sequence number 244 (orf_244_start=10618;end=10740;strand=-1;rf=2).
370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
370s Performing BLAST search for sequence number 245 (orf_245_start=10243;end=10356;strand=-1;rf=2).
370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
370s Performing BLAST search for sequence number 246 (orf_246_start=9961;end=10050;strand=-1;rf=2).
370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
370s Performing BLAST search for sequence number 247 (orf_247_start=9655;end=9732;strand=-1;rf=2).
370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
370s Performing BLAST search for sequence number 248 (orf_248_start=9490;end=9642;strand=-1;rf=2).
370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
370s Performing BLAST search for sequence number 249 (orf_249_start=9340;end=9489;strand=-1;rf=2).
371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
371s Writing HSP to file.
371s Performing BLAST search for sequence number 250 (orf_250_start=6061;end=9060;strand=-1;rf=2).
371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
371s Writing HSP to file.
371s Performing BLAST search for sequence number 251 (orf_251_start=5962;end=6039;strand=-1;rf=2).
371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
371s Performing BLAST search for sequence number 252 (orf_252_start=5704;end=5925;strand=-1;rf=2).
371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
371s Performing BLAST search for sequence number 253 (orf_253_start=4951;end=5124;strand=-1;rf=2).
371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
371s Performing BLAST search for sequence number 254 (orf_254_start=4819;end=4926;strand=-1;rf=2).
371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
371s Performing BLAST search for sequence number 255 (orf_255_start=4618;end=4794;strand=-1;rf=2).
371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
371s Performing BLAST search for sequence number 256 (orf_256_start=4351;end=4473;strand=-1;rf=2).
371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
371s Performing BLAST search for sequence number 257 (orf_257_start=4174;end=4263;strand=-1;rf=2).
372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
372s Performing BLAST search for sequence number 258 (orf_258_start=3781;end=3930;strand=-1;rf=2).
372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
372s Performing BLAST search for sequence number 259 (orf_259_start=3508;end=3702;strand=-1;rf=2).
372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
372s Performing BLAST search for sequence number 260 (orf_260_start=3430;end=3507;strand=-1;rf=2).
372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
372s Performing BLAST search for sequence number 261 (orf_261_start=3265;end=3387;strand=-1;rf=2).
372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
372s Performing BLAST search for sequence number 262 (orf_262_start=2788;end=2871;strand=-1;rf=2).
372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
372s Performing BLAST search for sequence number 263 (orf_263_start=2539;end=2625;strand=-1;rf=2).
372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
372s Performing BLAST search for sequence number 264 (orf_264_start=2218;end=2298;strand=-1;rf=2).
372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
372s Performing BLAST search for sequence number 265 (orf_265_start=2047;end=2166;strand=-1;rf=2).
372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
372s Performing BLAST search for sequence number 266 (orf_266_start=1894;end=2037;strand=-1;rf=2).
373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
373s Performing BLAST search for sequence number 267 (orf_267_start=1636;end=1746;strand=-1;rf=2).
373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
373s Performing BLAST search for sequence number 268 (orf_268_start=1420;end=1557;strand=-1;rf=2).
373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
373s Performing BLAST search for sequence number 269 (orf_269_start=1174;end=1350;strand=-1;rf=2).
373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
373s Performing BLAST search for sequence number 270 (orf_270_start=913;end=1074;strand=-1;rf=2).
373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
373s Performing BLAST search for sequence number 271 (orf_271_start=370;end=573;strand=-1;rf=2).
373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
373s Writing HSP to file.
373s Performing BLAST search for sequence number 272 (orf_272_start=202;end=357;strand=-1;rf=2).
373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
373s Performing BLAST search for sequence number 273 (orf_273_start=1;end=93;strand=-1;rf=2).
373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
373s Performing BLAST search for sequence number 274 (orf_274_start=15696;end=15899;strand=-1;rf=3).
374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
374s Performing BLAST search for sequence number 275 (orf_275_start=15348;end=15470;strand=-1;rf=3).
374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
374s Performing BLAST search for sequence number 276 (orf_276_start=15150;end=15329;strand=-1;rf=3).
374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
374s Performing BLAST search for sequence number 277 (orf_277_start=14451;end=14558;strand=-1;rf=3).
374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
374s Performing BLAST search for sequence number 278 (orf_278_start=14085;end=14213;strand=-1;rf=3).
374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
374s Performing BLAST search for sequence number 279 (orf_279_start=13533;end=13622;strand=-1;rf=3).
374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
374s Performing BLAST search for sequence number 280 (orf_280_start=13452;end=13526;strand=-1;rf=3).
374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
374s Performing BLAST search for sequence number 281 (orf_281_start=13050;end=13181;strand=-1;rf=3).
374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
374s Performing BLAST search for sequence number 282 (orf_282_start=12861;end=12965;strand=-1;rf=3).
375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
375s Performing BLAST search for sequence number 283 (orf_283_start=12657;end=12785;strand=-1;rf=3).
375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
375s Performing BLAST search for sequence number 284 (orf_284_start=12534;end=12623;strand=-1;rf=3).
375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
375s Performing BLAST search for sequence number 285 (orf_285_start=12375;end=12494;strand=-1;rf=3).
375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
375s Performing BLAST search for sequence number 286 (orf_286_start=12234;end=12311;strand=-1;rf=3).
375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
375s Performing BLAST search for sequence number 287 (orf_287_start=12030;end=12113;strand=-1;rf=3).
375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
375s Performing BLAST search for sequence number 288 (orf_288_start=11703;end=11810;strand=-1;rf=3).
375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
375s Performing BLAST search for sequence number 289 (orf_289_start=11439;end=11570;strand=-1;rf=3).
375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
375s Writing HSP to file.
375s Performing BLAST search for sequence number 290 (orf_290_start=11325;end=11420;strand=-1;rf=3).
375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
375s Performing BLAST search for sequence number 291 (orf_291_start=11178;end=11297;strand=-1;rf=3).
376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
376s Performing BLAST search for sequence number 292 (orf_292_start=11043;end=11138;strand=-1;rf=3).
376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
376s Performing BLAST search for sequence number 293 (orf_293_start=10674;end=10763;strand=-1;rf=3).
376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
376s Performing BLAST search for sequence number 294 (orf_294_start=10329;end=10607;strand=-1;rf=3).
376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
376s Performing BLAST search for sequence number 295 (orf_295_start=10146;end=10229;strand=-1;rf=3).
376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
376s Performing BLAST search for sequence number 296 (orf_296_start=9675;end=9887;strand=-1;rf=3).
376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
376s Performing BLAST search for sequence number 297 (orf_297_start=9483;end=9605;strand=-1;rf=3).
376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
376s Performing BLAST search for sequence number 298 (orf_298_start=9399;end=9476;strand=-1;rf=3).
376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
376s Performing BLAST search for sequence number 299 (orf_299_start=8955;end=9221;strand=-1;rf=3).
377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
377s Writing HSP to file.
377s Performing BLAST search for sequence number 300 (orf_300_start=8847;end=8954;strand=-1;rf=3).
377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
377s Writing HSP to file.
377s Performing BLAST search for sequence number 301 (orf_301_start=8112;end=8195;strand=-1;rf=3).
377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
377s Performing BLAST search for sequence number 302 (orf_302_start=8019;end=8099;strand=-1;rf=3).
377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
377s Performing BLAST search for sequence number 303 (orf_303_start=7851;end=7943;strand=-1;rf=3).
377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
377s Performing BLAST search for sequence number 304 (orf_304_start=7602;end=7682;strand=-1;rf=3).
377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
377s Performing BLAST search for sequence number 305 (orf_305_start=7512;end=7598;strand=-1;rf=3).
377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
377s Writing HSP to file.
377s Performing BLAST search for sequence number 306 (orf_306_start=7422;end=7508;strand=-1;rf=3).
377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
377s Performing BLAST search for sequence number 307 (orf_307_start=7236;end=7406;strand=-1;rf=3).
377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
377s Performing BLAST search for sequence number 308 (orf_308_start=6939;end=7037;strand=-1;rf=3).
378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
378s Performing BLAST search for sequence number 309 (orf_309_start=6822;end=6914;strand=-1;rf=3).
378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
378s Performing BLAST search for sequence number 310 (orf_310_start=6615;end=6770;strand=-1;rf=3).
378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
378s Performing BLAST search for sequence number 311 (orf_311_start=6168;end=6311;strand=-1;rf=3).
378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
378s Writing HSP to file.
378s Performing BLAST search for sequence number 312 (orf_312_start=5889;end=5978;strand=-1;rf=3).
378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
378s Performing BLAST search for sequence number 313 (orf_313_start=5520;end=5756;strand=-1;rf=3).
378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
378s Performing BLAST search for sequence number 314 (orf_314_start=5256;end=5351;strand=-1;rf=3).
378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
378s Performing BLAST search for sequence number 315 (orf_315_start=5043;end=5198;strand=-1;rf=3).
378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
378s Performing BLAST search for sequence number 316 (orf_316_start=4665;end=4787;strand=-1;rf=3).
378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
378s Performing BLAST search for sequence number 317 (orf_317_start=4554;end=4649;strand=-1;rf=3).
379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
379s Performing BLAST search for sequence number 318 (orf_318_start=4419;end=4553;strand=-1;rf=3).
379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
379s Performing BLAST search for sequence number 319 (orf_319_start=4188;end=4412;strand=-1;rf=3).
379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
379s Performing BLAST search for sequence number 320 (orf_320_start=3738;end=3830;strand=-1;rf=3).
379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
379s Performing BLAST search for sequence number 321 (orf_321_start=3546;end=3638;strand=-1;rf=3).
379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
379s Performing BLAST search for sequence number 322 (orf_322_start=3159;end=3245;strand=-1;rf=3).
379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
379s Performing BLAST search for sequence number 323 (orf_323_start=2685;end=3080;strand=-1;rf=3).
379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
379s Performing BLAST search for sequence number 324 (orf_324_start=2352;end=2552;strand=-1;rf=3).
379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
380s Performing BLAST search for sequence number 325 (orf_325_start=2244;end=2324;strand=-1;rf=3).
380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
380s Performing BLAST search for sequence number 326 (orf_326_start=2136;end=2216;strand=-1;rf=3).
380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
380s Performing BLAST search for sequence number 327 (orf_327_start=2007;end=2090;strand=-1;rf=3).
380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
380s Performing BLAST search for sequence number 328 (orf_328_start=1728;end=1985;strand=-1;rf=3).
380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
380s Performing BLAST search for sequence number 329 (orf_329_start=1554;end=1652;strand=-1;rf=3).
380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
380s Performing BLAST search for sequence number 330 (orf_330_start=1443;end=1538;strand=-1;rf=3).
380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
380s Performing BLAST search for sequence number 331 (orf_331_start=1182;end=1256;strand=-1;rf=3).
380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
380s Performing BLAST search for sequence number 332 (orf_332_start=1086;end=1169;strand=-1;rf=3).
380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
380s Performing BLAST search for sequence number 333 (orf_333_start=963;end=1073;strand=-1;rf=3).
381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
381s Performing BLAST search for sequence number 334 (orf_334_start=864;end=962;strand=-1;rf=3).
381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
381s Performing BLAST search for sequence number 335 (orf_335_start=714;end=815;strand=-1;rf=3).
381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
381s Writing HSP to file.
381s Performing BLAST search for sequence number 336 (orf_336_start=387;end=653;strand=-1;rf=3).
381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
381s Writing HSP to file.
381s Performing BLAST search for sequence number 337 (orf_337_start=279;end=356;strand=-1;rf=3).
381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
381s Performing BLAST search for sequence number 338 (orf_338_start=66;end=185;strand=-1;rf=3).
381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output
381s Open /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastn to view the BLAST results.
381s [Wednesday August 07 14:18:20 2024] [Notice] The BLAST results have been written to /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local.
381s [Wednesday August 07 14:18:20 2024] [Notice] Assigning COG categories to CDS translations from reference genome sequence in /var/tmp/cct/test_output/test_tblastn/reference_genome.
381s [Wednesday August 07 14:18:20 2024] [Notice] COG categories have been written to /var/tmp/cct/test_output/test_tblastn/features.
381s [Wednesday August 07 14:18:20 2024] [Notice] Creating CGView XML files.
381s [Wednesday August 07 14:18:20 2024] [Notice] The following BLAST results will be drawn, from outside to center:
381s [Wednesday August 07 14:18:20 2024] [Notice] two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf.fasta_split_DNA_tblastn
381s [Wednesday August 07 14:18:20 2024] [Notice] two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastn
381s [Wednesday August 07 14:18:20 2024] [Notice] two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf.fasta_split_DNA_tblastn
381s [Wednesday August 07 14:18:20 2024] [Notice] two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastn
382s Creating XML for feature sets on the outside of the backbone circle.
382s Feature sets written first are drawn closest to the backbone circle.
382s Creating XML for ORFs that are in reading frame +1.
382s Creating XML for ORFs that are in reading frame +2.
382s Creating XML for ORFs that are in reading frame +3.
382s Creating XML for feature sets on the inside of the backbone circle.
382s Feature sets written first are drawn closest to the backbone circle.
382s Creating XML for ORFs that are in reading frame -1.
382s Creating XML for ORFs that are in reading frame -2.
382s Creating XML for ORFs that are in reading frame -3.
382s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf.fasta_split_DNA_tblastn.
382s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastn.
382s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf.fasta_split_DNA_tblastn.
382s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastn.
382s Creating XML for GC content information.
382s Plotting GC content using a window size of 500 and a step of 1.
382s The maximum GC content value is 0.5768.
382s The minimum GC content value is 0.4311.
382s The average GC content value is 0.5051.
382s GC content will be scaled based on the maximum and minimum values.
382s GC content will be plotted as the deviation from the average value.
382s Creating XML for GC skew information.
382s Plotting GC skew using a window size of 500 and a step of 1.
382s The maximum GC skew value is 0.1587.
382s The minimum GC skew value is -0.2263.
382s The average GC skew value is -0.0036.
382s GC skew will be scaled based on the maximum and minimum values.
382s GC skew will be plotted as the deviation from the average value.
382s CGView XML file complete.
382s The recommended CGView command is:
382s ----------------------------------
382s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_tblastn/maps/cgview_xml/test_tblastn_project_settings.conf_medium.xml -o map.png
382s Success!
382s The following key-values were used:
382s -----------------------------------
382s arrowheadLength=6
382s average=T
382s atColorNeg=rgb(51,51,51)
382s atColorPos=rgb(51,51,51)
382s at_content=F
382s atSkewColorNeg=rgb(0,0,153)
382s atSkewColorPos=rgb(153,153,0)
382s at_skew=F
382s backboneColor=rgb(102,102,102)
382s backboneRadius=1000
382s backboneThickness=8
382s backgroundColor=white
382s blast_divider_ruler=F
382s blastRulerColor=rgb(255,165,0)
382s borderColor=black
382s combined_orfs=F
382s details=T
382s draw_divider_rings=T
382s featureOpacity=0.5
382s featureOpacityOther=0.5
382s featureSlotSpacing=6
382s featureThickness=9.86
382s featureThicknessPlot=59.14
382s feature_labels=F
382s gcColorNeg=rgb(0,0,0)
382s gcColorPos=rgb(0,0,0)
382s gc_content=T
382s gcSkewColorNeg=rgb(153,0,153)
382s gcSkewColorPos=rgb(0,153,0)
382s gc_skew=T
382s gene_decoration=arrow
382s gene_labels=F
382s global_label=true
382s height=3000
382s hit_labels=F
382s labelFontSize=15
382s labelPlacementQuality=good
382s labelLineLength=200
382s labelLineThickness=4
382s legend=T
382s legendFontSize=20
382s orf_labels=F
382s maxLabelLength=20
382s maxLegendLength=30
382s maxTitleLength=50
382s minimumFeatureLength=0.2
382s moveInnerLabelsToOuter=false
382s orfColor=rgb(204,0,0)
382s orfs=T
382s orf_size=25
382s otherColor=rgb(51,51,51)
382s parse_reading_frame=T
382s proteinColor=rgb(0,0,153)
382s reading_frames=F
382s rRNAColor=rgb(153,0,153)
382s rulerFontColor=rgb(0,0,0)
382s rulerFontSize=30
382s rulerPadding=40
382s scale=T
382s scale_blast=T
382s show_sequence_features=T
382s show_queries=T
382s startColor=rgb(153,0,153)
382s starts=ttg|ctg|att|atc|ata|atg|gtg
382s step=1
382s stopColor=rgb(204,0,0)
382s stops=taa|tag|tga
382s title=
382s titleFontSize=80
382s tickColor=rgb(0,51,0)
382s tickLength=15
382s tickThickness=6
382s tick_density=0.166666666666667
382s tRNAColor=rgb(153,0,0)
382s useInnerLabels=true
382s use_opacity=F
382s width=3000
382s window=500
382s -----------------------------------
382s [Wednesday August 07 14:18:21 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_tblastn/maps/cgview_xml.
382s [Wednesday August 07 14:18:21 2024] [Notice] Creating CGView maps.
382s Parsing XML input.
384s Drawing features..................................................................
384s Positioning and drawing 0 labels..........................
384s 0 labels were removed.
384s Drawing tick marks.
384s Drawing legends.
384s The map has been drawn.
384s Writing picture to /var/tmp/cct/test_output/test_tblastn/maps/test_tblastn_project_settings.png
385s Writing HTML to /var/tmp/cct/test_output/test_tblastn/maps/test_tblastn_project_settings.html
385s [Wednesday August 07 14:18:24 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_tblastn/maps.
385s Processing project 'test_orfs'
385s Processing project 'test_orfs' using configuration 'project_settings.conf'
385s [Wednesday August 07 14:18:24 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_orfs/project_settings.conf.
385s [Wednesday August 07 14:18:24 2024] [Notice] Creating CGView XML files.
385s Creating XML for feature sets on the outside of the backbone circle.
385s Feature sets written first are drawn closest to the backbone circle.
385s Creating XML for ORFs that are in reading frame +1.
385s Creating XML for ORFs that are in reading frame +2.
385s Creating XML for ORFs that are in reading frame +3.
385s Creating XML for feature sets on the inside of the backbone circle.
385s Feature sets written first are drawn closest to the backbone circle.
385s Creating XML for ORFs that are in reading frame -1.
385s Creating XML for ORFs that are in reading frame -2.
385s Creating XML for ORFs that are in reading frame -3.
385s CGView XML file complete.
385s The recommended CGView command is:
385s ----------------------------------
385s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_orfs/maps/cgview_xml/test_orfs_project_settings.conf_medium.xml -o map.png
385s Success!
385s The following key-values were used:
385s -----------------------------------
385s arrowheadLength=6
385s average=T
385s atColorNeg=rgb(51,51,51)
385s atColorPos=rgb(51,51,51)
385s at_content=F
385s atSkewColorNeg=rgb(0,0,153)
385s atSkewColorPos=rgb(153,153,0)
385s at_skew=F
385s backboneColor=rgb(102,102,102)
385s backboneRadius=1000
385s backboneThickness=8
385s backgroundColor=white
385s blast_divider_ruler=F
385s blastRulerColor=rgb(255,165,0)
385s borderColor=black
385s combined_orfs=F
385s details=T
385s draw_divider_rings=T
385s featureOpacity=0.5
385s featureOpacityOther=0.5
385s featureSlotSpacing=6
385s featureThickness=30
385s featureThicknessPlot=570.00
385s feature_labels=F
385s gcColorNeg=rgb(0,0,0)
385s gcColorPos=rgb(0,0,0)
385s gc_content=F
385s gcSkewColorNeg=rgb(153,0,153)
385s gcSkewColorPos=rgb(0,153,0)
385s gc_skew=F
385s gene_decoration=arrow
385s gene_labels=F
385s global_label=true
385s height=3000
385s hit_labels=F
385s labelFontSize=15
385s labelPlacementQuality=good
385s labelLineLength=200
385s labelLineThickness=4
385s legend=T
385s legendFontSize=20
385s orf_labels=T
385s maxLabelLength=20
385s maxLegendLength=30
385s maxTitleLength=50
385s minimumFeatureLength=0.2
385s moveInnerLabelsToOuter=false
385s orfColor=rgb(204,0,0)
385s orfs=T
385s orf_size=19
385s otherColor=rgb(51,51,51)
385s parse_reading_frame=F
385s proteinColor=rgb(0,0,153)
385s reading_frames=F
385s rRNAColor=rgb(153,0,153)
385s rulerFontColor=rgb(0,0,0)
385s rulerFontSize=30
385s rulerPadding=40
385s scale=T
385s scale_blast=T
385s show_sequence_features=T
385s show_queries=F
385s startColor=rgb(153,0,153)
385s starts=atg
385s step=1
385s stopColor=rgb(204,0,0)
385s stops=taa|tag|tga
385s title=
385s titleFontSize=80
385s tickColor=rgb(0,51,0)
385s tickLength=15
385s tickThickness=6
385s tick_density=0.166666666666667
385s tRNAColor=rgb(153,0,0)
385s useInnerLabels=true
385s use_opacity=F
385s width=3000
385s window=50
385s -----------------------------------
385s [Wednesday August 07 14:18:24 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_orfs/maps/cgview_xml.
385s [Wednesday August 07 14:18:24 2024] [Notice] Creating CGView maps.
385s Parsing XML input.
386s Drawing features..............
386s Positioning and drawing 41 labels..........................
386s 0 labels were removed.
386s Drawing tick marks.
386s Drawing legends.
386s The map has been drawn.
386s Writing picture to /var/tmp/cct/test_output/test_orfs/maps/test_orfs_project_settings.png
386s Writing HTML to /var/tmp/cct/test_output/test_orfs/maps/test_orfs_project_settings.html
386s [Wednesday August 07 14:18:25 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_orfs/maps.
386s Processing project 'test_blastx'
386s Processing project 'test_blastx' using configuration 'project_settings.conf'
386s [Wednesday August 07 14:18:25 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_blastx/project_settings.conf.
386s [Wednesday August 07 14:18:25 2024] [Notice] Splitting the reference genome sequence in /var/tmp/cct/test_output/test_blastx/reference_genome for BLAST searches.
386s [Wednesday August 07 14:18:25 2024] [Notice] Reference genome sequence has been split and written to /var/tmp/cct/test_output/test_blastx/reference_genome/split.
386s [Wednesday August 07 14:18:25 2024] [Notice] Copying protein sequences in /var/tmp/cct/test_output/test_blastx/comparison_genomes for BLAST searches.
386s [Wednesday August 07 14:18:25 2024] [Notice] Protein sequences have been copied to /var/tmp/cct/test_output/test_blastx/comparison_genomes/proteins.
386s [Wednesday August 07 14:18:25 2024] [Notice] Creating BLAST databases using the files in /var/tmp/cct/test_output/test_blastx/comparison_genomes/proteins.
386s [Wednesday August 07 14:18:25 2024] [Notice] The BLAST databases have been created in /var/tmp/cct/test_output/test_blastx/blast/blast_db.
386s [Wednesday August 07 14:18:25 2024] [Notice] Performing BLAST comparisons between sequences in /var/tmp/cct/test_output/test_blastx/reference_genome/split and databases in /var/tmp/cct/test_output/test_blastx/blast/blast_db.
386s [Wednesday August 07 14:18:25 2024] [Notice] The BLAST results have been written to /var/tmp/cct/test_output/test_blastx/blast/blast_results_local.
386s [Wednesday August 07 14:18:25 2024] [Notice] Assigning COG categories to CDS translations from reference genome sequence in /var/tmp/cct/test_output/test_blastx/reference_genome.
386s [Wednesday August 07 14:18:25 2024] [Notice] COG categories have been written to /var/tmp/cct/test_output/test_blastx/features.
386s [Wednesday August 07 14:18:25 2024] [Notice] Creating CGView XML files.
387s Creating XML for feature sets on the outside of the backbone circle.
387s Feature sets written first are drawn closest to the backbone circle.
387s Creating XML for ORFs that are in reading frame +1.
387s Creating XML for ORFs that are in reading frame +2.
387s Creating XML for ORFs that are in reading frame +3.
387s Creating XML for feature sets on the inside of the backbone circle.
387s Feature sets written first are drawn closest to the backbone circle.
387s Creating XML for ORFs that are in reading frame -1.
387s Creating XML for ORFs that are in reading frame -2.
387s Creating XML for ORFs that are in reading frame -3.
387s Creating XML for GC content information.
387s Plotting GC content using a window size of 500 and a step of 1.
387s The maximum GC content value is 0.5768.
387s The minimum GC content value is 0.4311.
387s The average GC content value is 0.5051.
387s GC content will be scaled based on the maximum and minimum values.
387s GC content will be plotted as the deviation from the average value.
387s Creating XML for GC skew information.
387s Plotting GC skew using a window size of 500 and a step of 1.
387s The maximum GC skew value is 0.1587.
387s The minimum GC skew value is -0.2263.
387s The average GC skew value is -0.0036.
387s GC skew will be scaled based on the maximum and minimum values.
387s GC skew will be plotted as the deviation from the average value.
387s CGView XML file complete.
387s The recommended CGView command is:
387s ----------------------------------
387s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_blastx/maps/cgview_xml/test_blastx_project_settings.conf_medium.xml -o map.png
387s Success!
387s The following key-values were used:
387s -----------------------------------
387s arrowheadLength=6
387s average=T
387s atColorNeg=rgb(51,51,51)
387s atColorPos=rgb(51,51,51)
387s at_content=F
387s atSkewColorNeg=rgb(0,0,153)
387s atSkewColorPos=rgb(153,153,0)
387s at_skew=F
387s backboneColor=rgb(102,102,102)
387s backboneRadius=1000
387s backboneThickness=8
387s backgroundColor=white
387s blast_divider_ruler=F
387s blastRulerColor=rgb(255,165,0)
387s borderColor=black
387s combined_orfs=F
387s details=T
387s draw_divider_rings=T
387s featureOpacity=0.5
387s featureOpacityOther=0.5
387s featureSlotSpacing=6
387s featureThickness=30
387s featureThicknessPlot=186.00
387s feature_labels=F
387s gcColorNeg=rgb(0,0,0)
387s gcColorPos=rgb(0,0,0)
387s gc_content=T
387s gcSkewColorNeg=rgb(153,0,153)
387s gcSkewColorPos=rgb(0,153,0)
387s gc_skew=T
387s gene_decoration=arrow
387s gene_labels=F
387s global_label=true
387s height=3000
387s hit_labels=F
387s labelFontSize=15
387s labelPlacementQuality=good
387s labelLineLength=200
387s labelLineThickness=4
387s legend=T
387s legendFontSize=20
387s orf_labels=F
387s maxLabelLength=20
387s maxLegendLength=30
387s maxTitleLength=50
387s minimumFeatureLength=0.2
387s moveInnerLabelsToOuter=false
387s orfColor=rgb(204,0,0)
387s orfs=T
387s orf_size=25
387s otherColor=rgb(51,51,51)
387s parse_reading_frame=T
387s proteinColor=rgb(0,0,153)
387s reading_frames=F
387s rRNAColor=rgb(153,0,153)
387s rulerFontColor=rgb(0,0,0)
387s rulerFontSize=30
387s rulerPadding=40
387s scale=T
387s scale_blast=T
387s show_sequence_features=T
387s show_queries=T
387s startColor=rgb(153,0,153)
387s starts=ttg|ctg|att|atc|ata|atg|gtg
387s step=1
387s stopColor=rgb(204,0,0)
387s stops=taa|tag|tga
387s title=
387s titleFontSize=80
387s tickColor=rgb(0,51,0)
387s tickLength=15
387s tickThickness=6
387s tick_density=0.166666666666667
387s tRNAColor=rgb(153,0,0)
387s useInnerLabels=true
387s use_opacity=F
387s width=3000
387s window=500
387s -----------------------------------
387s [Wednesday August 07 14:18:26 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_blastx/maps/cgview_xml.
387s [Wednesday August 07 14:18:26 2024] [Notice] Creating CGView maps.
387s Parsing XML input.
389s Drawing features..................
389s Positioning and drawing 0 labels..........................
389s 0 labels were removed.
389s Drawing tick marks.
389s Drawing legends.
389s The map has been drawn.
389s Writing picture to /var/tmp/cct/test_output/test_blastx/maps/test_blastx_project_settings.png
390s Writing HTML to /var/tmp/cct/test_output/test_blastx/maps/test_blastx_project_settings.html
390s [Wednesday August 07 14:18:29 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_blastx/maps.
390s Test project output written to '/var/tmp/cct/test_output'
390s autopkgtest [14:18:29]: test run-unit-test: -----------------------]
390s run-unit-test        PASS
390s autopkgtest [14:18:29]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
390s autopkgtest [14:18:29]: @@@@@@@@@@@@@@@@@@@@ summary
390s run-unit-test        PASS
401s nova [W] Skipping flock for amd64
401s Creating nova instance adt-oracular-i386-cct-20240807-141157-juju-7f2275-prod-proposed-migration-environment-3-1e2a1463-f336-4247-b109-0be1359debcc from image adt/ubuntu-oracular-amd64-server-20240807.img (UUID 9ba463ea-7914-46a4-a1eb-b149e31532e6)...