0s autopkgtest [18:05:32]: starting date and time: 2024-08-07 18:05:32+0000 0s autopkgtest [18:05:32]: git checkout: 0328c1ca Merge branch 'dep-drop-broken-debugging' into 'master' 0s autopkgtest [18:05:32]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.qe1ob005/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:pytest,src:sphinx --apt-upgrade python-ase --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=pytest/8.3.2-1 sphinx/7.4.7-2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-ppc64el-23.secgroup --name adt-oracular-ppc64el-python-ase-20240807-180531-juju-7f2275-prod-proposed-migration-environment-2-bc8f6593-a869-462d-b5c8-02b9086184c9 --image adt/ubuntu-oracular-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-ppc64el -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 82s autopkgtest [18:06:54]: testbed dpkg architecture: ppc64el 82s autopkgtest [18:06:54]: testbed apt version: 2.9.7 82s autopkgtest [18:06:54]: @@@@@@@@@@@@@@@@@@@@ test bed setup 83s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB] 84s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [81.2 kB] 84s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [10.1 kB] 84s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [8756 B] 84s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [617 kB] 84s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el Packages [141 kB] 84s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el c-n-f Metadata [3576 B] 84s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/restricted ppc64el Packages [2272 B] 84s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted ppc64el c-n-f Metadata [120 B] 84s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el Packages [704 kB] 84s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el c-n-f Metadata [21.3 kB] 84s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse ppc64el Packages [4752 B] 84s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse ppc64el c-n-f Metadata [388 B] 88s Fetched 1720 kB in 1s (1865 kB/s) 88s Reading package lists... 92s Reading package lists... 92s Building dependency tree... 92s Reading state information... 92s Calculating upgrade... 92s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 92s Reading package lists... 93s Building dependency tree... 93s Reading state information... 93s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 93s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 93s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 93s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 94s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 94s Reading package lists... 94s Reading package lists... 95s Building dependency tree... 95s Reading state information... 95s Calculating upgrade... 95s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 95s Reading package lists... 95s Building dependency tree... 95s Reading state information... 95s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 104s autopkgtest [18:07:16]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP Sat Apr 20 00:05:55 UTC 2024 104s autopkgtest [18:07:16]: @@@@@@@@@@@@@@@@@@@@ apt-source python-ase 109s Get:1 http://ftpmaster.internal/ubuntu oracular/universe python-ase 3.23.0-1 (dsc) [2586 B] 109s Get:2 http://ftpmaster.internal/ubuntu oracular/universe python-ase 3.23.0-1 (tar) [2721 kB] 109s Get:3 http://ftpmaster.internal/ubuntu oracular/universe python-ase 3.23.0-1 (diff) [9992 B] 109s gpgv: Signature made Thu Aug 1 12:38:04 2024 UTC 109s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 109s gpgv: Can't check signature: No public key 109s dpkg-source: warning: cannot verify inline signature for ./python-ase_3.23.0-1.dsc: no acceptable signature found 109s autopkgtest [18:07:21]: testing package python-ase version 3.23.0-1 110s autopkgtest [18:07:22]: build not needed 113s autopkgtest [18:07:25]: test command1: preparing testbed 118s Reading package lists... 118s Building dependency tree... 118s Reading state information... 118s Starting pkgProblemResolver with broken count: 0 118s Starting 2 pkgProblemResolver with broken count: 0 118s Done 118s The following additional packages will be installed: 118s ase blt fonts-font-awesome fonts-glyphicons-halflings fonts-lyx libaec0 118s libblas3 libgfortran5 libhdf5-103-1t64 libhdf5-hl-100t64 libjs-bootstrap 118s libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2 libnetcdf19t64 118s libopenjp2-7 libqhull-r8.0 libsymspg2 libsz2 libtcl8.6 libtk8.6 118s libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 libxss1 118s python-matplotlib-data python3-all python3-appdirs python3-ase 118s python3-brotli python3-cftime python3-contourpy python3-cycler 118s python3-dateutil python3-decorator python3-fonttools python3-fs 118s python3-iniconfig python3-kiwisolver python3-lxml python3-lz4 118s python3-matplotlib python3-mpmath python3-netcdf4 python3-numpy 118s python3-packaging python3-pil python3-pil.imagetk python3-pluggy 118s python3-pycodcif python3-pytest python3-pytest-mock python3-scipy 118s python3-six python3-spglib python3-sympy python3-tk python3-tz 118s python3-ufolib2 python3-unicodedata2 tk8.6-blt2.5 unicode-data x11-common 118s Suggested packages: 118s python-ase-doc blt-demo libjs-jquery-ui-docs liblcms2-utils tcl8.6 tk8.6 118s python-cycler-doc python-lxml-doc cm-super-minimal dvipng ffmpeg 118s fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common 118s python3-cairocffi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip 118s python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc 118s python3-gmpy2 gcc gfortran python-numpy-doc python3-dev python-pil-doc 118s python-pytest-mock-doc python-scipy-doc texlive-fonts-extra python-sympy-doc 118s tix python3-tk-dbg 118s Recommended packages: 118s javascript-common python3-bs4 python3-cssselect python3-html5lib 118s python3-olefile g++ | c++-compiler isympy-common 118s The following NEW packages will be installed: 118s ase autopkgtest-satdep blt fonts-font-awesome fonts-glyphicons-halflings 118s fonts-lyx libaec0 libblas3 libgfortran5 libhdf5-103-1t64 libhdf5-hl-100t64 118s libjs-bootstrap libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 118s liblcms2-2 libnetcdf19t64 libopenjp2-7 libqhull-r8.0 libsymspg2 libsz2 118s libtcl8.6 libtk8.6 libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 118s libxss1 python-matplotlib-data python3-all python3-appdirs python3-ase 118s python3-brotli python3-cftime python3-contourpy python3-cycler 118s python3-dateutil python3-decorator python3-fonttools python3-fs 118s python3-iniconfig python3-kiwisolver python3-lxml python3-lz4 118s python3-matplotlib python3-mpmath python3-netcdf4 python3-numpy 118s python3-packaging python3-pil python3-pil.imagetk python3-pluggy 118s python3-pycodcif python3-pytest python3-pytest-mock python3-scipy 118s python3-six python3-spglib python3-sympy python3-tk python3-tz 118s python3-ufolib2 python3-unicodedata2 tk8.6-blt2.5 unicode-data x11-common 118s 0 upgraded, 68 newly installed, 0 to remove and 0 not upgraded. 118s Need to get 64.0 MB/64.0 MB of archives. 118s After this operation, 283 MB of additional disk space will be used. 118s Get:1 /tmp/autopkgtest.hGqvFZ/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [744 B] 118s Get:2 http://ftpmaster.internal/ubuntu oracular/main ppc64el fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 119s Get:3 http://ftpmaster.internal/ubuntu oracular/universe ppc64el fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 119s Get:4 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 119s Get:5 http://ftpmaster.internal/ubuntu oracular/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 119s Get:6 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 119s Get:7 http://ftpmaster.internal/ubuntu oracular/main ppc64el libblas3 ppc64el 3.12.0-3build1 [227 kB] 119s Get:8 http://ftpmaster.internal/ubuntu oracular/main ppc64el libgfortran5 ppc64el 14.2.0-1ubuntu1 [571 kB] 119s Get:9 http://ftpmaster.internal/ubuntu oracular/main ppc64el liblapack3 ppc64el 3.12.0-3build1 [2804 kB] 119s Get:10 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-numpy ppc64el 1:1.26.4+ds-11 [4434 kB] 119s Get:11 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-decorator all 5.1.1-5 [10.1 kB] 119s Get:12 http://ftpmaster.internal/ubuntu oracular/universe ppc64el liblbfgsb0 ppc64el 3.0+dfsg.4-1build1 [33.0 kB] 119s Get:13 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-scipy ppc64el 1.12.0-2 [18.0 MB] 120s Get:14 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libsymspg2 ppc64el 2.3.1-1ubuntu2 [232 kB] 120s Get:15 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-spglib ppc64el 2.3.1-1ubuntu2 [29.1 kB] 120s Get:16 http://ftpmaster.internal/ubuntu oracular/universe ppc64el fonts-lyx all 2.4.1-2 [171 kB] 120s Get:17 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python-matplotlib-data all 3.6.3-2ubuntu1 [2937 kB] 120s Get:18 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-six all 1.16.0-7 [13.1 kB] 120s Get:19 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-dateutil all 2.9.0-2 [80.3 kB] 120s Get:20 http://ftpmaster.internal/ubuntu oracular/main ppc64el liblcms2-2 ppc64el 2.14-2build1 [233 kB] 120s Get:21 http://ftpmaster.internal/ubuntu oracular/main ppc64el libopenjp2-7 ppc64el 2.5.0-2build3 [239 kB] 120s Get:22 http://ftpmaster.internal/ubuntu oracular/main ppc64el libwebpdemux2 ppc64el 1.4.0-0.1 [14.1 kB] 120s Get:23 http://ftpmaster.internal/ubuntu oracular/main ppc64el libwebpmux3 ppc64el 1.4.0-0.1 [31.4 kB] 120s Get:24 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-pil ppc64el 10.4.0-1 [495 kB] 120s Get:25 http://ftpmaster.internal/ubuntu oracular/main ppc64el libtcl8.6 ppc64el 8.6.14+dfsg-1build1 [1204 kB] 120s Get:26 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1build1 [23.1 kB] 120s Get:27 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxft2 ppc64el 2.3.6-1build1 [61.5 kB] 120s Get:28 http://ftpmaster.internal/ubuntu oracular/main ppc64el x11-common all 1:7.7+23ubuntu3 [21.7 kB] 120s Get:29 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxss1 ppc64el 1:1.2.3-1build3 [7980 B] 120s Get:30 http://ftpmaster.internal/ubuntu oracular/main ppc64el libtk8.6 ppc64el 8.6.14-1build1 [944 kB] 120s Get:31 http://ftpmaster.internal/ubuntu oracular/main ppc64el tk8.6-blt2.5 ppc64el 2.5.3+dfsg-7build1 [784 kB] 120s Get:32 http://ftpmaster.internal/ubuntu oracular/main ppc64el blt ppc64el 2.5.3+dfsg-7build1 [4840 B] 120s Get:33 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-tk ppc64el 3.12.4-2 [117 kB] 120s Get:34 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-pil.imagetk ppc64el 10.4.0-1 [9608 B] 120s Get:35 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-contourpy ppc64el 1.0.7-3 [200 kB] 120s Get:36 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-cycler all 0.12.1-1 [9716 B] 120s Get:37 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-brotli ppc64el 1.1.0-2build2 [413 kB] 120s Get:38 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-ufolib2 all 0.16.0+dfsg1-1 [33.5 kB] 120s Get:39 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-mpmath all 1.3.0-1 [425 kB] 120s Get:40 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-sympy all 1.12.1-1 [3967 kB] 120s Get:41 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-tz all 2024.1-2 [31.4 kB] 120s Get:42 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-appdirs all 1.4.4-4 [10.9 kB] 120s Get:43 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-fs all 2.4.16-4 [91.3 kB] 120s Get:44 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxslt1.1 ppc64el 1.1.39-0exp1build1 [192 kB] 120s Get:45 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-lxml ppc64el 5.2.2-1 [1249 kB] 120s Get:46 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-lz4 ppc64el 4.0.2+dfsg-1build4 [27.8 kB] 120s Get:47 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-unicodedata2 ppc64el 15.1.0+ds-1build1 [367 kB] 120s Get:48 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-all ppc64el 3.12.4-1 [884 B] 120s Get:49 http://ftpmaster.internal/ubuntu oracular/universe ppc64el unicode-data all 15.1.0-1 [8878 kB] 120s Get:50 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-fonttools ppc64el 4.46.0-1build2 [1473 kB] 120s Get:51 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-kiwisolver ppc64el 1.4.5-1 [55.5 kB] 120s Get:52 http://ftpmaster.internal/ubuntu oracular/main ppc64el python3-packaging all 24.1-1 [41.4 kB] 120s Get:53 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libqhull-r8.0 ppc64el 2020.2-6build1 [225 kB] 120s Get:54 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-matplotlib ppc64el 3.6.3-2ubuntu1 [6175 kB] 120s Get:55 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-ase all 3.23.0-1 [1754 kB] 121s Get:56 http://ftpmaster.internal/ubuntu oracular/universe ppc64el ase all 3.23.0-1 [31.4 kB] 121s Get:57 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libaec0 ppc64el 1.1.3-1 [30.1 kB] 121s Get:58 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libsz2 ppc64el 1.1.3-1 [5566 B] 121s Get:59 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libhdf5-103-1t64 ppc64el 1.10.10+repack-3.1ubuntu4 [1395 kB] 121s Get:60 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libhdf5-hl-100t64 ppc64el 1.10.10+repack-3.1ubuntu4 [70.9 kB] 121s Get:61 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libnetcdf19t64 ppc64el 1:4.9.2-6 [595 kB] 121s Get:62 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-cftime ppc64el 1.6.4-1 [224 kB] 121s Get:63 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-iniconfig all 1.1.1-2 [6024 B] 121s Get:64 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-netcdf4 ppc64el 1.7.1-1 [608 kB] 121s Get:65 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-pluggy all 1.5.0-1 [21.0 kB] 121s Get:66 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-pycodcif ppc64el 3.10.0+dfsg-1 [71.9 kB] 121s Get:67 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el python3-pytest all 8.3.2-1 [251 kB] 121s Get:68 http://ftpmaster.internal/ubuntu oracular/universe ppc64el python3-pytest-mock all 3.14.0-1 [11.6 kB] 121s Fetched 64.0 MB in 2s (27.5 MB/s) 121s Selecting previously unselected package fonts-font-awesome. 121s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72527 files and directories currently installed.) 121s Preparing to unpack .../00-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 121s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 121s Selecting previously unselected package fonts-glyphicons-halflings. 121s Preparing to unpack .../01-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 121s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 121s Selecting previously unselected package libjs-bootstrap. 121s Preparing to unpack .../02-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 121s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 121s Selecting previously unselected package libjs-jquery. 121s Preparing to unpack .../03-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 121s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 121s Selecting previously unselected package libjs-jquery-ui. 121s Preparing to unpack .../04-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 121s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 121s Selecting previously unselected package libblas3:ppc64el. 121s Preparing to unpack .../05-libblas3_3.12.0-3build1_ppc64el.deb ... 121s Unpacking libblas3:ppc64el (3.12.0-3build1) ... 121s Selecting previously unselected package libgfortran5:ppc64el. 121s Preparing to unpack .../06-libgfortran5_14.2.0-1ubuntu1_ppc64el.deb ... 121s Unpacking libgfortran5:ppc64el (14.2.0-1ubuntu1) ... 121s Selecting previously unselected package liblapack3:ppc64el. 121s Preparing to unpack .../07-liblapack3_3.12.0-3build1_ppc64el.deb ... 121s Unpacking liblapack3:ppc64el (3.12.0-3build1) ... 121s Selecting previously unselected package python3-numpy. 121s Preparing to unpack .../08-python3-numpy_1%3a1.26.4+ds-11_ppc64el.deb ... 121s Unpacking python3-numpy (1:1.26.4+ds-11) ... 122s Selecting previously unselected package python3-decorator. 122s Preparing to unpack .../09-python3-decorator_5.1.1-5_all.deb ... 122s Unpacking python3-decorator (5.1.1-5) ... 122s Selecting previously unselected package liblbfgsb0:ppc64el. 122s Preparing to unpack .../10-liblbfgsb0_3.0+dfsg.4-1build1_ppc64el.deb ... 122s Unpacking liblbfgsb0:ppc64el (3.0+dfsg.4-1build1) ... 122s Selecting previously unselected package python3-scipy. 122s Preparing to unpack .../11-python3-scipy_1.12.0-2_ppc64el.deb ... 122s Unpacking python3-scipy (1.12.0-2) ... 122s Selecting previously unselected package libsymspg2:ppc64el. 122s Preparing to unpack .../12-libsymspg2_2.3.1-1ubuntu2_ppc64el.deb ... 122s Unpacking libsymspg2:ppc64el (2.3.1-1ubuntu2) ... 122s Selecting previously unselected package python3-spglib. 122s Preparing to unpack .../13-python3-spglib_2.3.1-1ubuntu2_ppc64el.deb ... 122s Unpacking python3-spglib (2.3.1-1ubuntu2) ... 122s Selecting previously unselected package fonts-lyx. 122s Preparing to unpack .../14-fonts-lyx_2.4.1-2_all.deb ... 122s Unpacking fonts-lyx (2.4.1-2) ... 122s Selecting previously unselected package python-matplotlib-data. 122s Preparing to unpack .../15-python-matplotlib-data_3.6.3-2ubuntu1_all.deb ... 122s Unpacking python-matplotlib-data (3.6.3-2ubuntu1) ... 122s Selecting previously unselected package python3-six. 122s Preparing to unpack .../16-python3-six_1.16.0-7_all.deb ... 122s Unpacking python3-six (1.16.0-7) ... 122s Selecting previously unselected package python3-dateutil. 122s Preparing to unpack .../17-python3-dateutil_2.9.0-2_all.deb ... 122s Unpacking python3-dateutil (2.9.0-2) ... 122s Selecting previously unselected package liblcms2-2:ppc64el. 122s Preparing to unpack .../18-liblcms2-2_2.14-2build1_ppc64el.deb ... 122s Unpacking liblcms2-2:ppc64el (2.14-2build1) ... 122s Selecting previously unselected package libopenjp2-7:ppc64el. 122s Preparing to unpack .../19-libopenjp2-7_2.5.0-2build3_ppc64el.deb ... 122s Unpacking libopenjp2-7:ppc64el (2.5.0-2build3) ... 122s Selecting previously unselected package libwebpdemux2:ppc64el. 122s Preparing to unpack .../20-libwebpdemux2_1.4.0-0.1_ppc64el.deb ... 122s Unpacking libwebpdemux2:ppc64el (1.4.0-0.1) ... 122s Selecting previously unselected package libwebpmux3:ppc64el. 122s Preparing to unpack .../21-libwebpmux3_1.4.0-0.1_ppc64el.deb ... 122s Unpacking libwebpmux3:ppc64el (1.4.0-0.1) ... 122s Selecting previously unselected package python3-pil:ppc64el. 122s Preparing to unpack .../22-python3-pil_10.4.0-1_ppc64el.deb ... 122s Unpacking python3-pil:ppc64el (10.4.0-1) ... 122s Selecting previously unselected package libtcl8.6:ppc64el. 122s Preparing to unpack .../23-libtcl8.6_8.6.14+dfsg-1build1_ppc64el.deb ... 122s Unpacking libtcl8.6:ppc64el (8.6.14+dfsg-1build1) ... 123s Selecting previously unselected package libxrender1:ppc64el. 123s Preparing to unpack .../24-libxrender1_1%3a0.9.10-1.1build1_ppc64el.deb ... 123s Unpacking libxrender1:ppc64el (1:0.9.10-1.1build1) ... 123s Selecting previously unselected package libxft2:ppc64el. 123s Preparing to unpack .../25-libxft2_2.3.6-1build1_ppc64el.deb ... 123s Unpacking libxft2:ppc64el (2.3.6-1build1) ... 123s Selecting previously unselected package x11-common. 123s Preparing to unpack .../26-x11-common_1%3a7.7+23ubuntu3_all.deb ... 123s Unpacking x11-common (1:7.7+23ubuntu3) ... 123s Selecting previously unselected package libxss1:ppc64el. 123s Preparing to unpack .../27-libxss1_1%3a1.2.3-1build3_ppc64el.deb ... 123s Unpacking libxss1:ppc64el (1:1.2.3-1build3) ... 123s Selecting previously unselected package libtk8.6:ppc64el. 123s Preparing to unpack .../28-libtk8.6_8.6.14-1build1_ppc64el.deb ... 123s Unpacking libtk8.6:ppc64el (8.6.14-1build1) ... 123s Selecting previously unselected package tk8.6-blt2.5. 123s Preparing to unpack .../29-tk8.6-blt2.5_2.5.3+dfsg-7build1_ppc64el.deb ... 123s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 123s Selecting previously unselected package blt. 123s Preparing to unpack .../30-blt_2.5.3+dfsg-7build1_ppc64el.deb ... 123s Unpacking blt (2.5.3+dfsg-7build1) ... 123s Selecting previously unselected package python3-tk:ppc64el. 123s Preparing to unpack .../31-python3-tk_3.12.4-2_ppc64el.deb ... 123s Unpacking python3-tk:ppc64el (3.12.4-2) ... 123s Selecting previously unselected package python3-pil.imagetk:ppc64el. 123s Preparing to unpack .../32-python3-pil.imagetk_10.4.0-1_ppc64el.deb ... 123s Unpacking python3-pil.imagetk:ppc64el (10.4.0-1) ... 123s Selecting previously unselected package python3-contourpy. 123s Preparing to unpack .../33-python3-contourpy_1.0.7-3_ppc64el.deb ... 123s Unpacking python3-contourpy (1.0.7-3) ... 123s Selecting previously unselected package python3-cycler. 123s Preparing to unpack .../34-python3-cycler_0.12.1-1_all.deb ... 123s Unpacking python3-cycler (0.12.1-1) ... 123s Selecting previously unselected package python3-brotli. 123s Preparing to unpack .../35-python3-brotli_1.1.0-2build2_ppc64el.deb ... 123s Unpacking python3-brotli (1.1.0-2build2) ... 123s Selecting previously unselected package python3-ufolib2. 123s Preparing to unpack .../36-python3-ufolib2_0.16.0+dfsg1-1_all.deb ... 123s Unpacking python3-ufolib2 (0.16.0+dfsg1-1) ... 123s Selecting previously unselected package python3-mpmath. 123s Preparing to unpack .../37-python3-mpmath_1.3.0-1_all.deb ... 123s Unpacking python3-mpmath (1.3.0-1) ... 123s Selecting previously unselected package python3-sympy. 123s Preparing to unpack .../38-python3-sympy_1.12.1-1_all.deb ... 123s Unpacking python3-sympy (1.12.1-1) ... 123s Selecting previously unselected package python3-tz. 123s Preparing to unpack .../39-python3-tz_2024.1-2_all.deb ... 123s Unpacking python3-tz (2024.1-2) ... 123s Selecting previously unselected package python3-appdirs. 123s Preparing to unpack .../40-python3-appdirs_1.4.4-4_all.deb ... 123s Unpacking python3-appdirs (1.4.4-4) ... 123s Selecting previously unselected package python3-fs. 123s Preparing to unpack .../41-python3-fs_2.4.16-4_all.deb ... 123s Unpacking python3-fs (2.4.16-4) ... 123s Selecting previously unselected package libxslt1.1:ppc64el. 123s Preparing to unpack .../42-libxslt1.1_1.1.39-0exp1build1_ppc64el.deb ... 123s Unpacking libxslt1.1:ppc64el (1.1.39-0exp1build1) ... 123s Selecting previously unselected package python3-lxml:ppc64el. 123s Preparing to unpack .../43-python3-lxml_5.2.2-1_ppc64el.deb ... 123s Unpacking python3-lxml:ppc64el (5.2.2-1) ... 123s Selecting previously unselected package python3-lz4. 123s Preparing to unpack .../44-python3-lz4_4.0.2+dfsg-1build4_ppc64el.deb ... 123s Unpacking python3-lz4 (4.0.2+dfsg-1build4) ... 123s Selecting previously unselected package python3-unicodedata2. 123s Preparing to unpack .../45-python3-unicodedata2_15.1.0+ds-1build1_ppc64el.deb ... 123s Unpacking python3-unicodedata2 (15.1.0+ds-1build1) ... 123s Selecting previously unselected package python3-all. 123s Preparing to unpack .../46-python3-all_3.12.4-1_ppc64el.deb ... 123s Unpacking python3-all (3.12.4-1) ... 123s Selecting previously unselected package unicode-data. 123s Preparing to unpack .../47-unicode-data_15.1.0-1_all.deb ... 123s Unpacking unicode-data (15.1.0-1) ... 123s Selecting previously unselected package python3-fonttools. 123s Preparing to unpack .../48-python3-fonttools_4.46.0-1build2_ppc64el.deb ... 123s Unpacking python3-fonttools (4.46.0-1build2) ... 123s Selecting previously unselected package python3-kiwisolver. 123s Preparing to unpack .../49-python3-kiwisolver_1.4.5-1_ppc64el.deb ... 123s Unpacking python3-kiwisolver (1.4.5-1) ... 124s Selecting previously unselected package python3-packaging. 124s Preparing to unpack .../50-python3-packaging_24.1-1_all.deb ... 124s Unpacking python3-packaging (24.1-1) ... 124s Selecting previously unselected package libqhull-r8.0:ppc64el. 124s Preparing to unpack .../51-libqhull-r8.0_2020.2-6build1_ppc64el.deb ... 124s Unpacking libqhull-r8.0:ppc64el (2020.2-6build1) ... 124s Selecting previously unselected package python3-matplotlib. 124s Preparing to unpack .../52-python3-matplotlib_3.6.3-2ubuntu1_ppc64el.deb ... 124s Unpacking python3-matplotlib (3.6.3-2ubuntu1) ... 124s Selecting previously unselected package python3-ase. 124s Preparing to unpack .../53-python3-ase_3.23.0-1_all.deb ... 124s Unpacking python3-ase (3.23.0-1) ... 124s Selecting previously unselected package ase. 124s Preparing to unpack .../54-ase_3.23.0-1_all.deb ... 124s Unpacking ase (3.23.0-1) ... 124s Selecting previously unselected package libaec0:ppc64el. 124s Preparing to unpack .../55-libaec0_1.1.3-1_ppc64el.deb ... 124s Unpacking libaec0:ppc64el (1.1.3-1) ... 124s Selecting previously unselected package libsz2:ppc64el. 124s Preparing to unpack .../56-libsz2_1.1.3-1_ppc64el.deb ... 124s Unpacking libsz2:ppc64el (1.1.3-1) ... 124s Selecting previously unselected package libhdf5-103-1t64:ppc64el. 124s Preparing to unpack .../57-libhdf5-103-1t64_1.10.10+repack-3.1ubuntu4_ppc64el.deb ... 124s Unpacking libhdf5-103-1t64:ppc64el (1.10.10+repack-3.1ubuntu4) ... 124s Selecting previously unselected package libhdf5-hl-100t64:ppc64el. 124s Preparing to unpack .../58-libhdf5-hl-100t64_1.10.10+repack-3.1ubuntu4_ppc64el.deb ... 124s Unpacking libhdf5-hl-100t64:ppc64el (1.10.10+repack-3.1ubuntu4) ... 124s Selecting previously unselected package libnetcdf19t64:ppc64el. 124s Preparing to unpack .../59-libnetcdf19t64_1%3a4.9.2-6_ppc64el.deb ... 124s Unpacking libnetcdf19t64:ppc64el (1:4.9.2-6) ... 124s Selecting previously unselected package python3-cftime. 124s Preparing to unpack .../60-python3-cftime_1.6.4-1_ppc64el.deb ... 124s Unpacking python3-cftime (1.6.4-1) ... 124s Selecting previously unselected package python3-iniconfig. 124s Preparing to unpack .../61-python3-iniconfig_1.1.1-2_all.deb ... 124s Unpacking python3-iniconfig (1.1.1-2) ... 124s Selecting previously unselected package python3-netcdf4. 124s Preparing to unpack .../62-python3-netcdf4_1.7.1-1_ppc64el.deb ... 124s Unpacking python3-netcdf4 (1.7.1-1) ... 124s Selecting previously unselected package python3-pluggy. 124s Preparing to unpack .../63-python3-pluggy_1.5.0-1_all.deb ... 124s Unpacking python3-pluggy (1.5.0-1) ... 124s Selecting previously unselected package python3-pycodcif. 124s Preparing to unpack .../64-python3-pycodcif_3.10.0+dfsg-1_ppc64el.deb ... 124s Unpacking python3-pycodcif (3.10.0+dfsg-1) ... 124s Selecting previously unselected package python3-pytest. 124s Preparing to unpack .../65-python3-pytest_8.3.2-1_all.deb ... 124s Unpacking python3-pytest (8.3.2-1) ... 124s Selecting previously unselected package python3-pytest-mock. 124s Preparing to unpack .../66-python3-pytest-mock_3.14.0-1_all.deb ... 124s Unpacking python3-pytest-mock (3.14.0-1) ... 124s Selecting previously unselected package autopkgtest-satdep. 124s Preparing to unpack .../67-1-autopkgtest-satdep.deb ... 124s Unpacking autopkgtest-satdep (0) ... 124s Setting up liblcms2-2:ppc64el (2.14-2build1) ... 124s Setting up python3-iniconfig (1.1.1-2) ... 124s Setting up libxrender1:ppc64el (1:0.9.10-1.1build1) ... 124s Setting up python3-lz4 (4.0.2+dfsg-1build4) ... 124s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 124s Setting up python3-unicodedata2 (15.1.0+ds-1build1) ... 124s Setting up fonts-lyx (2.4.1-2) ... 124s Setting up libwebpdemux2:ppc64el (1.4.0-0.1) ... 124s Setting up x11-common (1:7.7+23ubuntu3) ... 125s Setting up libqhull-r8.0:ppc64el (2020.2-6build1) ... 125s Setting up python3-all (3.12.4-1) ... 125s Setting up python3-pycodcif (3.10.0+dfsg-1) ... 125s Setting up libaec0:ppc64el (1.1.3-1) ... 125s Setting up python3-tz (2024.1-2) ... 125s Setting up unicode-data (15.1.0-1) ... 125s Setting up libsymspg2:ppc64el (2.3.1-1ubuntu2) ... 125s Setting up python3-six (1.16.0-7) ... 125s Setting up python3-decorator (5.1.1-5) ... 125s Setting up libblas3:ppc64el (3.12.0-3build1) ... 125s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 125s Setting up python3-packaging (24.1-1) ... 125s Setting up python3-brotli (1.1.0-2build2) ... 126s Setting up python3-cycler (0.12.1-1) ... 126s Setting up python3-kiwisolver (1.4.5-1) ... 126s Setting up libtcl8.6:ppc64el (8.6.14+dfsg-1build1) ... 126s Setting up libgfortran5:ppc64el (14.2.0-1ubuntu1) ... 126s Setting up python3-pluggy (1.5.0-1) ... 126s Setting up libxslt1.1:ppc64el (1.1.39-0exp1build1) ... 126s Setting up libopenjp2-7:ppc64el (2.5.0-2build3) ... 126s Setting up python3-dateutil (2.9.0-2) ... 126s Setting up libxss1:ppc64el (1:1.2.3-1build3) ... 126s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 126s Setting up python3-mpmath (1.3.0-1) ... 127s Setting up python-matplotlib-data (3.6.3-2ubuntu1) ... 127s Setting up libwebpmux3:ppc64el (1.4.0-0.1) ... 127s Setting up python3-appdirs (1.4.4-4) ... 127s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 127s Setting up libsz2:ppc64el (1.1.3-1) ... 127s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 127s Setting up python3-sympy (1.12.1-1) ... 134s Setting up liblapack3:ppc64el (3.12.0-3build1) ... 134s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 134s Setting up libxft2:ppc64el (2.3.6-1build1) ... 134s Setting up python3-pytest (8.3.2-1) ... 134s Setting up libtk8.6:ppc64el (8.6.14-1build1) ... 134s Setting up python3-fs (2.4.16-4) ... 134s Setting up python3-pil:ppc64el (10.4.0-1) ... 135s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 135s Setting up python3-numpy (1:1.26.4+ds-11) ... 137s Setting up python3-pytest-mock (3.14.0-1) ... 137s Setting up python3-lxml:ppc64el (5.2.2-1) ... 137s Setting up python3-contourpy (1.0.7-3) ... 137s Setting up libhdf5-103-1t64:ppc64el (1.10.10+repack-3.1ubuntu4) ... 137s Setting up python3-spglib (2.3.1-1ubuntu2) ... 137s Setting up liblbfgsb0:ppc64el (3.0+dfsg.4-1build1) ... 137s Setting up libhdf5-hl-100t64:ppc64el (1.10.10+repack-3.1ubuntu4) ... 137s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 137s Setting up libnetcdf19t64:ppc64el (1:4.9.2-6) ... 137s Setting up python3-scipy (1.12.0-2) ... 141s Setting up blt (2.5.3+dfsg-7build1) ... 141s Setting up python3-tk:ppc64el (3.12.4-2) ... 141s Setting up python3-pil.imagetk:ppc64el (10.4.0-1) ... 141s Setting up python3-cftime (1.6.4-1) ... 142s Setting up python3-netcdf4 (1.7.1-1) ... 142s Setting up python3-fonttools (4.46.0-1build2) ... 143s Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... 143s Setting up python3-matplotlib (3.6.3-2ubuntu1) ... 145s Setting up python3-ase (3.23.0-1) ... 147s Setting up ase (3.23.0-1) ... 147s Setting up autopkgtest-satdep (0) ... 147s Processing triggers for libc-bin (2.39-0ubuntu9) ... 147s Processing triggers for man-db (2.12.1-2) ... 152s (Reading database ... 80914 files and directories currently installed.) 152s Removing autopkgtest-satdep (0) ... 154s autopkgtest [18:08:06]: test command1: for py in $(py3versions -s); do cd "$AUTOPKGTEST_TMP"; $py -m ase test; done 154s autopkgtest [18:08:06]: test command1: [----------------------- 154s About to run pytest with these parameters: 162s ============================= test session starts ============================== 162s platform linux -- Python 3.12.4, pytest-8.3.2, pluggy-1.5.0 162s 162s Libraries 162s ========= 162s 162s ase-3.23.0 /usr/lib/python3/dist-packages/ase 162s numpy-1.26.4 /usr/lib/python3/dist-packages/numpy 162s scipy-1.12.0 /usr/lib/python3/dist-packages/scipy 162s matplotlib-3.6.3 /usr/lib/python3/dist-packages/matplotlib 162s spglib-2.3.1 /usr/lib/python3/dist-packages/spglib 162s ase_ext not installed 162s flask not installed 162s psycopg2 not installed 162s pyamg not installed 162s 162s 162s Calculators 162s =========== 162s Config: No configuration file specified 162s Datafiles: ase-datafiles package not installed 162s 162s [ ] abinit not installed: 'abinit' 162s [ ] ace cfg= 162s [ ] aims not installed: 'aims' 162s [ ] amber cfg= 162s [ ] asap not installed: asap3 162s [ ] castep not installed: 'castep' 162s [ ] cp2k not installed: 'cp2k' 162s [ ] crystal cfg= 162s [ ] demon cfg= 162s [ ] demonnano cfg= 162s [ ] dftb not installed: No 'dftb' section 162s [ ] dftd3 not installed: 'dftd3' 162s [ ] dmol cfg= 162s [ ] elk not installed: No 'elk' section 162s [ ] espresso not installed: 'espresso' 162s [ ] exciting not installed: 'exciting' 162s [ ] gamess_us cfg= 162s [ ] gaussian cfg= 162s [ ] gpaw not installed: gpaw 162s [ ] gromacs not installed: 'gromacs' 162s [ ] gulp cfg= 162s [ ] hotbit cfg= 162s [ ] lammpslib not installed: missing python wrappers: cannot import lammps 162s [ ] lammpsrun not installed: 'lammps' 162s [ ] mopac not installed: No 'mopac' section 162s [ ] nwchem not installed: No 'nwchem' section 162s [ ] octopus not installed: 'octopus' 162s [ ] onetep cfg= 162s [ ] openmx not installed: 'openmx' 162s [ ] orca not installed: 'orca' 162s [ ] plumed not installed: 162s [ ] psi4 not installed: psi4 162s [ ] qchem cfg= 162s [ ] siesta not installed: No 'siesta' section 162s [ ] turbomole cfg= 162s [ ] vasp not installed: 'vasp' 162s 162s * Use --calculators option to select calculators. 162s 162s * See "ase test --help-calculators" on how to configure calculators. 162s 162s * This listing only includes external calculators known by the test 162s system. Others are "configured" by setting an environment variable 162s like "ASE_xxx_COMMAND" in order to allow tests to run. Please see 162s the documentation of that individual calculator. 162s 162s 162s rootdir: /usr/lib/python3/dist-packages/ase/test 162s configfile: pytest.ini 162s plugins: mock-3.14.0 162s collected 3334 items 162s 162s atoms/test_atom.py .. [ 0%] 162s atoms/test_atom_scaled_pos.py ... [ 0%] 162s atoms/test_atoms.py ............. [ 0%] 162s atoms/test_atoms_angle.py . [ 0%] 162s atoms/test_atoms_distance.py .. [ 0%] 162s atoms/test_atoms_formula.py . [ 0%] 162s atoms/test_atoms_get_duplicates.py . [ 0%] 162s atoms/test_atoms_get_positions.py ... [ 0%] 162s atoms/test_atoms_getitem.py ............. [ 1%] 162s atoms/test_atoms_indices.py . [ 1%] 162s atoms/test_atoms_info_copy.py . [ 1%] 162s atoms/test_atoms_instantiation.py .... [ 1%] 162s atoms/test_build.py . [ 1%] 162s atoms/test_center.py ........... [ 1%] 162s atoms/test_center_nonperiodic.py . [ 1%] 162s atoms/test_compare_atoms.py . [ 1%] 162s atoms/test_deprecated_get_set.py ... [ 1%] 162s atoms/test_get_angles.py . [ 1%] 162s atoms/test_h2.py . [ 1%] 162s atoms/test_mic.py . [ 1%] 162s atoms/test_momenta_velocities.py ... [ 2%] 162s atoms/test_permute_axes.py . [ 2%] 162s atoms/test_rotate.py . [ 2%] 162s atoms/test_rotate_euler.py . [ 2%] 162s atoms/test_scaled_positions.py . [ 2%] 162s atoms/test_set_get_angle.py . [ 2%] 162s bandstructure/test_bandpath.py ....... [ 2%] 162s bandstructure/test_bandstructure.py ... [ 2%] 162s bandstructure/test_bandstructure_json.py . [ 2%] 166s bandstructure/test_bandstructure_many.py ....................... [ 3%] 166s bandstructure/test_bandstructure_transform_mcl.py . [ 3%] 166s bandstructure/test_resolve_custom_kpoints.py ..... [ 3%] 166s bravais/test_2d_cell_pbc.py .... [ 3%] 167s bravais/test_bravais_type_engine.py ................. [ 4%] 167s bravais/test_eps.py .. [ 4%] 167s bravais/test_hex.py . [ 4%] 167s bravais/test_lattices.py ............................................... [ 5%] 167s .. [ 5%] 167s bravais/test_line_lattice.py . [ 5%] 168s bravais/test_main.py ......................... [ 6%] 168s bravais/test_orcc_mcl.py . [ 6%] 168s bravais/test_reduce.py . [ 6%] 168s bravais/test_standard_form.py ....................... [ 7%] 168s build_/test_attach.py .... [ 7%] 169s build_/test_build_bulk.py .............................................. [ 8%] 169s ........................................................................ [ 10%] 169s .... [ 10%] 169s build_/test_bulk.py .......... [ 11%] 169s build_/test_connected.py .... [ 11%] 169s build_/test_minimize_rotation_and_translation.py .. [ 11%] 171s build_/test_supercells.py .............................................. [ 12%] 172s .. [ 12%] 172s build_/test_surface.py ... [ 12%] 172s build_/test_surface_stack.py . [ 12%] 172s build_/test_surface_terminations.py . [ 12%] 172s calculator/abinit/test_abinit_cmdline.py s [ 12%] 172s calculator/abinit/test_main.py sssssssss [ 13%] 172s calculator/ace/test_ace.py s [ 13%] 172s calculator/ace/test_ace_calculator.py . [ 13%] 172s calculator/aims/test_H2O_aims.py s [ 13%] 172s calculator/aims/test_aims_interface.py s [ 13%] 172s calculator/aims/test_version.py . [ 13%] 172s calculator/amber/test_amber.py s [ 13%] 172s calculator/castep/test_castep_interface.py ........ [ 13%] 172s calculator/cp2k/test_cp2k_H2_None.py s [ 13%] 172s calculator/cp2k/test_cp2k_dcd.py s [ 13%] 172s calculator/cp2k/test_cp2k_many.py ssssssssssss [ 14%] 172s calculator/cp2k/test_cp2k_restart.py . 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[ 78%] 374s spectrum/test_doscollection.py ......................................... [ 79%] 374s .. [ 79%] 375s spectrum/test_dosdata.py ............................................... [ 80%] 375s ..... [ 81%] 375s standardization/test_properties.py . [ 81%] 375s test_bader.py . [ 81%] 375s test_bandpath_kpts_axis.py . [ 81%] 379s test_basin.py . [ 81%] 379s test_calc_outputs_big.py ... [ 81%] 379s test_calc_properties.py .......................................... [ 82%] 379s test_calculator_equal.py ............................................... [ 83%] 379s ........................................................................ [ 86%] 379s ........................................................................ [ 88%] 379s ............................................. [ 89%] 379s test_calculator_label.py . [ 89%] 380s test_checkpoint.py .. [ 89%] 382s test_cluster.py ........................ [ 90%] 382s test_cutoffs.py . [ 90%] 382s test_dependency_list.py .. [ 90%] 382s test_diffusion_coefficient.py .. [ 90%] 382s test_dimer.py . [ 90%] 382s test_dimer_method.py . [ 90%] 382s test_distmom.py . [ 90%] 383s test_doctests.py ................ [ 91%] 384s test_dos.py . [ 91%] 384s test_eos.py . [ 91%] 384s test_example.py . [ 91%] 385s test_external_viewer.py ..ss.......... [ 91%] 385s test_filecache.py ................. [ 92%] 385s test_forcecurve.py . [ 92%] 385s test_formula.py .................. [ 92%] 385s test_grid_slice.py . [ 92%] 385s test_gromacs.py .. [ 92%] 386s test_hcp.py . [ 92%] 386s test_imports.py . [ 92%] 386s test_isotopes.py . [ 92%] 386s test_issue276.py . [ 92%] 386s test_kpts.py . [ 93%] 387s test_kpts2kpts.py ............................. [ 93%] 387s test_lattice_lindep.py ........ [ 94%] 387s test_linesearch_maxstep.py .... [ 94%] 387s test_lock.py .. [ 94%] 387s test_loggingcalc.py . [ 94%] 387s test_makebandpath.py . [ 94%] 388s test_matplotlib_plot.py ..... [ 94%] 389s test_minimum_image_convention.py ... [ 94%] 389s test_mixingcalc.py . [ 94%] 389s test_mpi.py .s [ 94%] 389s test_noncollinear.py . [ 94%] 389s test_nwchem_writer.py .. [ 94%] 389s test_parsemath.py . [ 94%] 389s test_pathlib_support.py . [ 94%] 389s test_phasediagram.py ... [ 94%] 390s test_phonons.py ..... [ 95%] 390s test_potential_energies.py . [ 95%] 390s test_pourbaix.py . [ 95%] 390s test_properties.py . [ 95%] 390s test_ptable.py . [ 95%] 390s test_pubchem.py . [ 95%] 390s test_quaternions.py ......... [ 95%] 390s test_root_surf.py . [ 95%] 390s test_s22.py . [ 95%] 390s test_singlepoint_dft_calc.py . [ 95%] 390s test_singlepointcalc.py . [ 95%] 391s test_springcalc.py . [ 95%] 391s test_stm.py . [ 95%] 393s test_stress.py .. [ 95%] 397s test_structure_comparator.py .................... [ 96%] 397s test_symbols.py ........... [ 96%] 397s test_thermochemistry.py .........s..... [ 97%] 397s test_things.py . [ 97%] 397s test_timing.py . [ 97%] 397s test_units.py .. [ 97%] 397s test_util.py ......................... [ 97%] 397s test_versionnumber.py . [ 98%] 397s test_x3d.py s [ 98%] 398s test_xrdebye.py ... [ 98%] 398s test_xwopen.py ... [ 98%] 398s test_zmatrix.py .... [ 98%] 400s transport/test_transport_calculator.py . [ 98%] 401s vibrations/test_albrecht.py .... [ 98%] 401s vibrations/test_bond_polarizability_raman.py ... [ 98%] 401s vibrations/test_combine.py . [ 98%] 402s vibrations/test_folding.py . [ 98%] 402s vibrations/test_franck_condon.py ... [ 98%] 402s vibrations/test_pickle2json.py . [ 98%] 403s vibrations/test_placzek.py .... [ 98%] 403s vibrations/test_profeta_albrecht.py . [ 98%] 403s vibrations/test_vib.py ................................... [ 99%] 403s vibrations/test_vibrations_example.py . [100%] 403s 403s =============================== warnings summary =============================== 403s :488 403s :488: RuntimeWarning: numpy.ndarray size changed, may indicate binary incompatibility. Expected 16 from C header, got 96 from PyObject 403s 403s calculator/turbomole/test_turbomole_H2.py::test_turbomole_H2_rhf_singlet 403s /usr/lib/python3.12/pathlib.py:407: ResourceWarning: unclosed file <_io.FileIO name='/dev/null' mode='wb' closefd=True> 403s def _load_parts(self): 403s Enable tracemalloc to get traceback where the object was allocated. 403s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 403s 403s fio/test_espresso.py::test_pw_input_write_nested_flat 403s /usr/lib/python3/dist-packages/ase/io/espresso_namelist/namelist.py:105: DeprecationWarning: Use of kwarg(s) as keyword(s) is deprecated,use input_data instead 403s warnings.warn( 403s 403s fio/test_espresso.py::TestConstraints::test_fix_scaled 403s /usr/lib/python3/dist-packages/ase/io/espresso.py:1274: UserWarning: Ignored unknown constraint FixScaled(indices=[0], [True, True, False]) 403s warnings.warn(f'Ignored unknown constraint {constraint}') 403s 403s forcefields/test_rattle_linear.py::test_rattle_linear 403s /usr/lib/python3.12/contextlib.py:132: ResourceWarning: unclosed file <_io.FileIO name='/dev/null' mode='wb' closefd=True> 403s def __enter__(self): 403s Enable tracemalloc to get traceback where the object was allocated. 403s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 403s 403s geometry/test_dimensionality.py::test_fcc[TSA] 403s /usr/lib/python3/dist-packages/ase/cell.py:230: ResourceWarning: unclosed file <_io.TextIOWrapper name='/dev/null' mode='w' encoding='utf-8'> 403s def __array__(self, dtype=None, copy=False): 403s Enable tracemalloc to get traceback where the object was allocated. 403s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 403s 403s optimize/test_optimizer_restart.py::test_optimizers_restart[BFGS] 403s /usr/lib/python3/dist-packages/_pytest/python.py:159: ResourceWarning: unclosed file <_io.BufferedWriter name='single_BFGS.traj'> 403s result = testfunction(**testargs) 403s Enable tracemalloc to get traceback where the object was allocated. 403s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 403s 403s optimize/test_optimizer_restart.py::test_optimizers_restart[BFGS] 403s /usr/lib/python3/dist-packages/_pytest/python.py:159: ResourceWarning: unclosed file <_io.BufferedWriter name='fragile_BFGS.traj'> 403s result = testfunction(**testargs) 403s Enable tracemalloc to get traceback where the object was allocated. 403s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 403s 403s optimize/test_optimizer_restart.py::test_optimizers_restart[BFGS] 403s /usr/lib/python3/dist-packages/_pytest/python.py:159: ResourceWarning: unclosed file <_io.BufferedRandom name='fragile_BFGS.traj'> 403s result = testfunction(**testargs) 403s Enable tracemalloc to get traceback where the object was allocated. 403s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 403s 403s optimize/test_optimizer_restart.py::test_optimizers_restart[CellAwareBFGS] 403s /usr/lib/python3/dist-packages/_pytest/python.py:159: ResourceWarning: unclosed file <_io.BufferedWriter name='single_CellAwareBFGS.traj'> 403s result = testfunction(**testargs) 403s Enable tracemalloc to get traceback where the object was allocated. 403s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 403s 403s optimize/test_optimizer_restart.py::test_optimizers_restart[CellAwareBFGS] 403s /usr/lib/python3/dist-packages/_pytest/python.py:159: ResourceWarning: unclosed file <_io.BufferedWriter name='fragile_CellAwareBFGS.traj'> 403s result = testfunction(**testargs) 403s Enable tracemalloc to get traceback where the object was allocated. 403s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 403s 403s optimize/test_optimizer_restart.py::test_optimizers_restart[BFGSLineSearch] 403s /usr/lib/python3/dist-packages/ase/optimize/optimize.py:470: UserWarning: WARNING: restart function is untested and may result in unintended behavior. Namely orig_cell is not loaded in the UnitCellFilter. Please test on your own to ensure consistent results. 403s warnings.warn( 403s 403s optimize/test_optimizers.py::test_unconverged[GoodOldQuasiNewton] 403s /usr/lib/python3/dist-packages/ase/calculators/calculator.py:215: ResourceWarning: unclosed file <_io.BufferedWriter name='single_BFGSLineSearch.traj'> 403s def equal(a, b, tol=None, rtol=None, atol=None): 403s Enable tracemalloc to get traceback where the object was allocated. 403s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 403s 403s optimize/test_optimizers.py::test_unconverged[GoodOldQuasiNewton] 403s /usr/lib/python3/dist-packages/ase/calculators/calculator.py:215: ResourceWarning: unclosed file <_io.BufferedWriter name='fragile_BFGSLineSearch.traj'> 403s def equal(a, b, tol=None, rtol=None, atol=None): 403s Enable tracemalloc to get traceback where the object was allocated. 403s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 403s 403s ../../_pytest/cacheprovider.py:477 403s /usr/lib/python3/dist-packages/_pytest/cacheprovider.py:477: PytestCacheWarning: could not create cache path /usr/lib/python3/dist-packages/ase/test/.pytest_cache/v/cache/nodeids: [Errno 13] Permission denied: '/usr/lib/python3/dist-packages/ase/test/pytest-cache-files-yupez6v0' 403s config.cache.set("cache/nodeids", sorted(self.cached_nodeids)) 403s 403s ../../_pytest/stepwise.py:51 403s /usr/lib/python3/dist-packages/_pytest/stepwise.py:51: PytestCacheWarning: could not create cache path /usr/lib/python3/dist-packages/ase/test/.pytest_cache/v/cache/stepwise: [Errno 13] Permission denied: '/usr/lib/python3/dist-packages/ase/test/pytest-cache-files-mk0lhz93' 403s session.config.cache.set(STEPWISE_CACHE_DIR, []) 403s 403s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 403s ==== 2783 passed, 546 skipped, 5 xfailed, 16 warnings in 248.36s (0:04:08) ===== 404s autopkgtest [18:12:16]: test command1: -----------------------] 405s command1 PASS 405s autopkgtest [18:12:17]: test command1: - - - - - - - - - - results - - - - - - - - - - 406s autopkgtest [18:12:18]: @@@@@@@@@@@@@@@@@@@@ summary 406s command1 PASS 425s Creating nova instance adt-oracular-ppc64el-python-ase-20240807-180531-juju-7f2275-prod-proposed-migration-environment-2-bc8f6593-a869-462d-b5c8-02b9086184c9 from image adt/ubuntu-oracular-ppc64el-server-20240807.img (UUID 22d2510d-6872-4fc2-b88c-14c7e1eb3604)...